RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 PTPROQ16827 1216 aa17.75■□□□□ 0.43
LTBR-201ENST00000228918 EMC10Q5UCC4 262 aa17.75■□□□□ 0.43
LTBR-201ENST00000228918 EFCAB13Q8IY85 973 aa17.75■□□□□ 0.43
LTBR-201ENST00000228918 OLIG1Q8TAK6 271 aa17.75■□□□□ 0.43
LTBR-201ENST00000228918 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.75■□□□□ 0.433e-8■■■■■ 29.7
LTBR-201ENST00000228918 EBAG9O00559 213 aa17.74■□□□□ 0.43
LTBR-201ENST00000228918 GTF2A1P52655 376 aaPredicted RBP17.74■□□□□ 0.43
LTBR-201ENST00000228918 RBM5P52756 815 aaKnown RBP eCLIP17.74■□□□□ 0.433e-10■■■■■ 45.8
LTBR-201ENST00000228918 FKBP1AP62942 108 aaKnown RBP17.74■□□□□ 0.43
LTBR-201ENST00000228918 CUL1Q13616 776 aa17.74■□□□□ 0.43
LTBR-201ENST00000228918 DACT2Q5SW24 774 aa17.74■□□□□ 0.43
LTBR-201ENST00000228918 HSD17B14Q9BPX1 270 aa17.74■□□□□ 0.43
LTBR-201ENST00000228918 FAM107BQ9H098 131 aa17.74■□□□□ 0.43
LTBR-201ENST00000228918 SFI1A8K8P3 1242 aa17.74■□□□□ 0.43
LTBR-201ENST00000228918 FAM13AO94988 1023 aa17.74■□□□□ 0.43
LTBR-201ENST00000228918 JAG1P78504 1218 aa17.74■□□□□ 0.43
LTBR-201ENST00000228918 CTTNQ14247 550 aaKnown RBP17.74■□□□□ 0.43
LTBR-201ENST00000228918 STRIP1Q5VSL9 837 aa17.74■□□□□ 0.43
LTBR-201ENST00000228918 PEX26Q7Z412 305 aa17.74■□□□□ 0.43
LTBR-201ENST00000228918 FAM186BQ8IYM0 893 aa17.74■□□□□ 0.43
LTBR-201ENST00000228918 RASGEF1CQ8N431 466 aa17.74■□□□□ 0.43
LTBR-201ENST00000228918 PIGOQ8TEQ8 1089 aa17.74■□□□□ 0.43
LTBR-201ENST00000228918 LMBR1Q8WVP7 490 aa17.74■□□□□ 0.43
LTBR-201ENST00000228918 TMX4Q9H1E5 349 aaPredicted RBP17.74■□□□□ 0.43
LTBR-201ENST00000228918 IKZF4Q9H2S9 585 aa17.74■□□□□ 0.43
LTBR-201ENST00000228918 RABEP2Q9H5N1 569 aa17.74■□□□□ 0.43
LTBR-201ENST00000228918 TUFT1Q9NNX1 390 aa17.74■□□□□ 0.43
LTBR-201ENST00000228918 SUCLA2Q9P2R7 463 aaPredicted RBP17.74■□□□□ 0.43
LTBR-201ENST00000228918 GFPT2O94808 682 aa17.73■□□□□ 0.43
LTBR-201ENST00000228918 NMT1P30419 496 aaKnown RBP17.73■□□□□ 0.43
LTBR-201ENST00000228918 PSMC2P35998 433 aaKnown RBP17.73■□□□□ 0.43
LTBR-201ENST00000228918 STAT1P42224 750 aa17.73■□□□□ 0.43
LTBR-201ENST00000228918 ATP1A2P50993 1020 aa17.73■□□□□ 0.43
LTBR-201ENST00000228918 NPEPPSP55786 919 aa17.73■□□□□ 0.43
LTBR-201ENST00000228918 HLTFQ14527 1009 aaKnown RBP eCLIP17.73■□□□□ 0.43
LTBR-201ENST00000228918 C1orf186Q6ZWK4 172 aa17.73■□□□□ 0.43
LTBR-201ENST00000228918 SYCE1Q8N0S2 351 aa17.73■□□□□ 0.43
LTBR-201ENST00000228918 LNX1Q8TBB1 728 aaPredicted RBP17.73■□□□□ 0.43
LTBR-201ENST00000228918 U2AF1L4Q8WU68 220 aaKnown RBP17.73■□□□□ 0.43
LTBR-201ENST00000228918 PPM1EQ8WY54 764 aa17.73■□□□□ 0.43
LTBR-201ENST00000228918 ATP6V1G3Q96LB4 118 aa17.73■□□□□ 0.43
LTBR-201ENST00000228918 WDR18Q9BV38 432 aa17.73■□□□□ 0.43
LTBR-201ENST00000228918 AP1M1Q9BXS5 423 aa17.73■□□□□ 0.43
LTBR-201ENST00000228918 PRR12Q9ULL5 1215 aa17.73■□□□□ 0.43
LTBR-201ENST00000228918 TMCO5BA8MYB1 307 aa17.73■□□□□ 0.43
LTBR-201ENST00000228918 CCDC188H7C350 402 aa17.73■□□□□ 0.43
LTBR-201ENST00000228918 SART1O43290 800 aaKnown RBP17.73■□□□□ 0.43
LTBR-201ENST00000228918 EVI5O60447 810 aa17.73■□□□□ 0.43
LTBR-201ENST00000228918 NT5DC3Q86UY8 548 aa17.73■□□□□ 0.43
LTBR-201ENST00000228918 PACS2Q86VP3 889 aa17.73■□□□□ 0.43
LTBR-201ENST00000228918 MYCT1Q8N699 235 aa17.73■□□□□ 0.43
LTBR-201ENST00000228918 SLC30A5Q8TAD4 765 aa17.73■□□□□ 0.43
LTBR-201ENST00000228918 RNPC3Q96LT9 517 aaKnown RBP17.73■□□□□ 0.43
LTBR-201ENST00000228918 MKNK1Q9BUB5 465 aa17.73■□□□□ 0.43
LTBR-201ENST00000228918 PLAAQ9Y263 795 aa17.73■□□□□ 0.43
LTBR-201ENST00000228918 ATRNL1Q5VV63 1379 aa17.73■□□□□ 0.43
LTBR-201ENST00000228918 F8VZ95 297 aa17.72■□□□□ 0.43
LTBR-201ENST00000228918 SLITRK3O94933 977 aa17.72■□□□□ 0.43
LTBR-201ENST00000228918 GH2P01242 217 aa17.72■□□□□ 0.43
LTBR-201ENST00000228918 NR1D1P20393 614 aa17.72■□□□□ 0.43
LTBR-201ENST00000228918 SOX5P35711 763 aa17.72■□□□□ 0.43
LTBR-201ENST00000228918 FRMPD4Q14CM0 1322 aa17.72■□□□□ 0.43
LTBR-201ENST00000228918 TTC31Q49AM3 519 aaPredicted RBP17.72■□□□□ 0.43
LTBR-201ENST00000228918 OTOP1Q7RTM1 612 aa17.72■□□□□ 0.43
LTBR-201ENST00000228918 MASTLQ96GX5 879 aa17.72■□□□□ 0.43
LTBR-201ENST00000228918 DYDC2Q96IM9 177 aa17.72■□□□□ 0.43
LTBR-201ENST00000228918 FIZ1Q96SL8 496 aa17.72■□□□□ 0.43
LTBR-201ENST00000228918 DDX47Q9H0S4 455 aaKnown RBP17.72■□□□□ 0.43
LTBR-201ENST00000228918 NCANO14594 1321 aa17.72■□□□□ 0.43
LTBR-201ENST00000228918 UBE4BO95155 1302 aa17.72■□□□□ 0.43
LTBR-201ENST00000228918 AFF2P51816 1311 aa17.72■□□□□ 0.43
LTBR-201ENST00000228918 A0A1W2PRG0 241 aa17.72■□□□□ 0.43
LTBR-201ENST00000228918 HMGB1P1B2RPK0 211 aaPredicted RBP17.72■□□□□ 0.43
LTBR-201ENST00000228918 PPP1R12BO60237 982 aaPredicted RBP17.72■□□□□ 0.43
LTBR-201ENST00000228918 PSMD10O75832 226 aa17.72■□□□□ 0.43
LTBR-201ENST00000228918 FMO5P49326 533 aa17.72■□□□□ 0.43
LTBR-201ENST00000228918 GALCP54803 685 aa17.72■□□□□ 0.43
LTBR-201ENST00000228918 ZC2HC1CQ53FD0 456 aaPredicted RBP17.72■□□□□ 0.43
LTBR-201ENST00000228918 LRIG3Q6UXM1 1119 aa17.72■□□□□ 0.43
LTBR-201ENST00000228918 SLC30A10Q6XR72 485 aa17.72■□□□□ 0.43
LTBR-201ENST00000228918 DAAM2Q86T65 1068 aa17.72■□□□□ 0.43
LTBR-201ENST00000228918 HES6Q96HZ4 224 aa17.72■□□□□ 0.43
LTBR-201ENST00000228918 PARVGQ9HBI0 331 aa17.72■□□□□ 0.43
LTBR-201ENST00000228918 FAM169AQ9Y6X4 670 aa17.72■□□□□ 0.43
LTBR-201ENST00000228918 MYH11P35749 1972 aa17.71■□□□□ 0.43
LTBR-201ENST00000228918 A0A087WUV0 522 aaPredicted RBP17.71■□□□□ 0.43
LTBR-201ENST00000228918 KRIT1O00522 736 aa17.71■□□□□ 0.43
LTBR-201ENST00000228918 ZEB2O60315 1214 aa17.71■□□□□ 0.43
LTBR-201ENST00000228918 GUCY2CP25092 1073 aa17.71■□□□□ 0.43
LTBR-201ENST00000228918 PDE6BP35913 854 aa17.71■□□□□ 0.43
LTBR-201ENST00000228918 HSD17B3P37058 310 aa17.71■□□□□ 0.43
LTBR-201ENST00000228918 PPP2R5CQ13362 524 aa17.71■□□□□ 0.43
LTBR-201ENST00000228918 RRP1BQ14684 758 aaKnown RBP17.71■□□□□ 0.43
LTBR-201ENST00000228918 CEP85LQ5SZL2 805 aa17.71■□□□□ 0.43
LTBR-201ENST00000228918 RBM26Q5T8P6 1007 aaKnown RBP17.71■□□□□ 0.43
LTBR-201ENST00000228918 LRCH2Q5VUJ6 765 aa17.71■□□□□ 0.43
LTBR-201ENST00000228918 MAATS1Q7Z4T9 603 aa17.71■□□□□ 0.43
LTBR-201ENST00000228918 TADA2BQ86TJ2 420 aa17.71■□□□□ 0.43
LTBR-201ENST00000228918 TPH2Q8IWU9 490 aa17.71■□□□□ 0.43
LTBR-201ENST00000228918 STK33Q9BYT3 514 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms