RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 BAIAP3O94812 1187 aa14.19□□□□□ -0.14
LSM5-201ENST00000223084 RPLP2P05387 115 aaKnown RBP14.19□□□□□ -0.14
LSM5-201ENST00000223084 SPATA31C1P0DKV0 1188 aa14.19□□□□□ -0.14
LSM5-201ENST00000223084 MYOGP15173 224 aa14.19□□□□□ -0.14
LSM5-201ENST00000223084 CD52P31358 61 aa14.19□□□□□ -0.14
LSM5-201ENST00000223084 YWHABP31946 246 aaKnown RBP14.19□□□□□ -0.14
LSM5-201ENST00000223084 KCNJ6P48051 423 aa14.19□□□□□ -0.14
LSM5-201ENST00000223084 MKRN4PQ13434 485 aaPredicted RBP14.19□□□□□ -0.14
LSM5-201ENST00000223084 IL17AQ16552 155 aa14.19□□□□□ -0.14
LSM5-201ENST00000223084 KIZQ2M2Z5 673 aa14.19□□□□□ -0.14
LSM5-201ENST00000223084 TMEM266Q2M3C6 531 aa14.19□□□□□ -0.14
LSM5-201ENST00000223084 BMP2KQ9NSY1 1161 aaPredicted RBP14.19□□□□□ -0.14
LSM5-201ENST00000223084 MTMR6Q9Y217 621 aa14.19□□□□□ -0.14
LSM5-201ENST00000223084 YBX2Q9Y2T7 364 aaKnown RBP14.19□□□□□ -0.14
LSM5-201ENST00000223084 KDM3AQ9Y4C1 1321 aa14.18□□□□□ -0.14
LSM5-201ENST00000223084 SZT2Q5T011 3432 aa14.18□□□□□ -0.14
LSM5-201ENST00000223084 IGKV6-21A0A0C4DH24 114 aa14.18□□□□□ -0.14
LSM5-201ENST00000223084 GPR32O75388 356 aa14.18□□□□□ -0.14
LSM5-201ENST00000223084 HSP90AA1P07900 732 aaKnown RBP14.18□□□□□ -0.14
LSM5-201ENST00000223084 DNAJB2P25686 324 aa14.18□□□□□ -0.14
LSM5-201ENST00000223084 TMOD1P28289 359 aa14.18□□□□□ -0.14
LSM5-201ENST00000223084 FXR2P51116 673 aaKnown RBP eCLIP14.18□□□□□ -0.14
LSM5-201ENST00000223084 RESTQ13127 1097 aa14.18□□□□□ -0.14
LSM5-201ENST00000223084 XKR9Q5GH70 373 aa14.18□□□□□ -0.14
LSM5-201ENST00000223084 FAM173BQ6P4H8 233 aa14.18□□□□□ -0.14
LSM5-201ENST00000223084 TSHZ1Q6ZSZ6 1077 aa14.18□□□□□ -0.14
LSM5-201ENST00000223084 BRAPQ7Z569 592 aa14.18□□□□□ -0.14
LSM5-201ENST00000223084 CATSPER3Q86XQ3 398 aa14.18□□□□□ -0.14
LSM5-201ENST00000223084 NEK9Q8TD19 979 aa14.18□□□□□ -0.14
LSM5-201ENST00000223084 PIGOQ8TEQ8 1089 aa14.18□□□□□ -0.14
LSM5-201ENST00000223084 TMEM40Q8WWA1 233 aa14.18□□□□□ -0.14
LSM5-201ENST00000223084 FAM161BQ96MY7 647 aa14.18□□□□□ -0.14
LSM5-201ENST00000223084 MAP7D2Q96T17 732 aa14.18□□□□□ -0.14
LSM5-201ENST00000223084 SLC9A7Q96T83 725 aa14.18□□□□□ -0.14
LSM5-201ENST00000223084 OSMRQ99650 979 aa14.18□□□□□ -0.14
LSM5-201ENST00000223084 NKX2-4Q9H2Z4 354 aa14.18□□□□□ -0.14
LSM5-201ENST00000223084 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.17□□□□□ -0.14
LSM5-201ENST00000223084 PP2D1A8MPX8 630 aa14.17□□□□□ -0.14
LSM5-201ENST00000223084 STX6O43752 255 aa14.17□□□□□ -0.14
LSM5-201ENST00000223084 MAFO75444 373 aaPredicted RBP14.17□□□□□ -0.14
LSM5-201ENST00000223084 LYPLA2O95372 231 aa14.17□□□□□ -0.14
LSM5-201ENST00000223084 NLRP11P59045 1033 aaKnown RBP14.17□□□□□ -0.14
LSM5-201ENST00000223084 ATP2C1P98194 919 aaPredicted RBP14.17□□□□□ -0.14
LSM5-201ENST00000223084 ECM1Q16610 540 aa14.17□□□□□ -0.14
LSM5-201ENST00000223084 FAM117BQ6P1L5 589 aa14.17□□□□□ -0.14
LSM5-201ENST00000223084 OTUD6AQ7L8S5 288 aa14.17□□□□□ -0.14
LSM5-201ENST00000223084 HERC6Q8IVU3 1022 aa14.17□□□□□ -0.14
LSM5-201ENST00000223084 MYOCDQ8IZQ8 938 aa14.17□□□□□ -0.14
LSM5-201ENST00000223084 DEFB123Q8N688 67 aa14.17□□□□□ -0.14
LSM5-201ENST00000223084 ERMNQ8TAM6 284 aa14.17□□□□□ -0.14
LSM5-201ENST00000223084 TIFAQ96CG3 184 aa14.17□□□□□ -0.14
LSM5-201ENST00000223084 ADAMTS10Q9H324 1103 aa14.17□□□□□ -0.14
LSM5-201ENST00000223084 TUFT1Q9NNX1 390 aa14.17□□□□□ -0.14
LSM5-201ENST00000223084 SUCLA2Q9P2R7 463 aaPredicted RBP14.17□□□□□ -0.14
LSM5-201ENST00000223084 LRWD1Q9UFC0 647 aa14.17□□□□□ -0.14
LSM5-201ENST00000223084 MSRAQ9UJ68 235 aa14.17□□□□□ -0.14
LSM5-201ENST00000223084 NOC2LQ9Y3T9 749 aaKnown RBP14.17□□□□□ -0.14
LSM5-201ENST00000223084 ARID2Q68CP9 1835 aa14.16□□□□□ -0.14
LSM5-201ENST00000223084 LAD1O00515 517 aa14.16□□□□□ -0.14
LSM5-201ENST00000223084 EFCAB14O75071 495 aa14.16□□□□□ -0.14
LSM5-201ENST00000223084 CDC25AP30304 524 aa14.16□□□□□ -0.14
LSM5-201ENST00000223084 PRPHP41219 470 aa14.16□□□□□ -0.14
LSM5-201ENST00000223084 GPC3P51654 580 aa14.16□□□□□ -0.14
LSM5-201ENST00000223084 CRYBB1P53674 252 aaPredicted RBP14.16□□□□□ -0.14
LSM5-201ENST00000223084 POLGP54098 1239 aaPredicted RBP14.16□□□□□ -0.14
LSM5-201ENST00000223084 NFX1Q12986 1120 aaKnown RBP14.16□□□□□ -0.14
LSM5-201ENST00000223084 PAK2Q13177 524 aa14.16□□□□□ -0.14
LSM5-201ENST00000223084 ZNF697Q5TEC3 545 aa14.16□□□□□ -0.14
LSM5-201ENST00000223084 FOXD4L5Q5VV16 416 aaPredicted RBP14.16□□□□□ -0.14
LSM5-201ENST00000223084 GPR153Q6NV75 609 aa14.16□□□□□ -0.14
LSM5-201ENST00000223084 POTEGQ6S5H5 508 aa14.16□□□□□ -0.14
LSM5-201ENST00000223084 DTHD1Q6ZMT9 781 aa14.16□□□□□ -0.14
LSM5-201ENST00000223084 PHOSPHO2Q8TCD6 241 aa14.16□□□□□ -0.14
LSM5-201ENST00000223084 FOXD4L4Q8WXT5 416 aaPredicted RBP14.16□□□□□ -0.14
LSM5-201ENST00000223084 APBB2Q92870 758 aa14.16□□□□□ -0.14
LSM5-201ENST00000223084 TMEM143Q96AN5 459 aa14.16□□□□□ -0.14
LSM5-201ENST00000223084 SCLT1Q96NL6 688 aa14.16□□□□□ -0.14
LSM5-201ENST00000223084 POLR3CQ9BUI4 534 aaPredicted RBP14.16□□□□□ -0.14
LSM5-201ENST00000223084 TTYH1Q9H313 450 aaPredicted RBP14.16□□□□□ -0.14
LSM5-201ENST00000223084 DHX33Q9H6R0 707 aaKnown RBP14.16□□□□□ -0.14
LSM5-201ENST00000223084 PADI3Q9ULW8 664 aa14.16□□□□□ -0.14
LSM5-201ENST00000223084 ENPP3O14638 875 aa14.15□□□□□ -0.14
LSM5-201ENST00000223084 CSDE1O75534 798 aaKnown RBP14.15□□□□□ -0.14
LSM5-201ENST00000223084 RPS6KA5O75582 802 aa14.15□□□□□ -0.14
LSM5-201ENST00000223084 UPP2O95045 317 aa14.15□□□□□ -0.14
LSM5-201ENST00000223084 AMHP03971 560 aa14.15□□□□□ -0.14
LSM5-201ENST00000223084 RPA1P27694 616 aa14.15□□□□□ -0.14
LSM5-201ENST00000223084 CCT6AP40227 531 aaKnown RBP14.15□□□□□ -0.14
LSM5-201ENST00000223084 RFC5P40937 340 aa14.15□□□□□ -0.14
LSM5-201ENST00000223084 RARRES1P49788 294 aa14.15□□□□□ -0.14
LSM5-201ENST00000223084 DNM2P50570 870 aa14.15□□□□□ -0.14
LSM5-201ENST00000223084 PDIA5Q14554 519 aa14.15□□□□□ -0.14
LSM5-201ENST00000223084 EMC2Q15006 297 aa14.15□□□□□ -0.14
LSM5-201ENST00000223084 SF3A1Q15459 793 aaKnown RBP14.15□□□□□ -0.14
LSM5-201ENST00000223084 RAB30Q15771 203 aa14.15□□□□□ -0.14
LSM5-201ENST00000223084 RTN4RL1Q86UN2 441 aaPredicted RBP14.15□□□□□ -0.14
LSM5-201ENST00000223084 FAM228AQ86W67 206 aa14.15□□□□□ -0.14
LSM5-201ENST00000223084 RHPN2Q8IUC4 686 aa14.15□□□□□ -0.14
LSM5-201ENST00000223084 KSR1Q8IVT5 923 aa14.15□□□□□ -0.14
LSM5-201ENST00000223084 IGSF22Q8N9C0 903 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms