RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 INPP1P49441 399 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 KCTD16Q68DU8 428 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 TOGARAM2Q6ZUX3 1019 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 FAM133AQ8N9E0 248 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 SYT2Q8N9I0 419 aaPredicted RBP4.72□□□□□ -1.65
CHD9-201ENST00000219084 ATP11CQ8NB49 1132 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 ICA1LQ8NDH6 482 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 TBCKQ8TEA7 893 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 NACA2Q9H009 215 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 TMEM51Q9NW97 253 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 IP6K2Q9UHH9 426 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 SERPINB13Q9UIV8 391 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 PTPN22Q9Y2R2 807 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 LMTK3Q96Q04 1460 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 UBN2Q6ZU65 1347 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 WDR46O15213 610 aaKnown RBP4.72□□□□□ -1.65
CHD9-201ENST00000219084 MOCS3O95396 460 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 FGGP02679 453 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 OATP04181 439 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 CYP2C19P33261 490 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 SESN3P58005 492 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 MRPS25P82663 173 aaKnown RBP4.72□□□□□ -1.65
CHD9-201ENST00000219084 PPP2R5CQ13362 524 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 GRM4Q14833 912 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 ALKBH5Q6P6C2 394 aaKnown RBP4.72□□□□□ -1.65
CHD9-201ENST00000219084 NLRP14Q86W24 1093 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 TNIP2Q8NFZ5 429 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 RAD54LQ92698 747 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 SGSM3Q96HU1 749 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 VPS39Q96JC1 886 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 UBN1Q9NPG3 1134 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 AFG3L2Q9Y4W6 797 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 H7C0C1 242 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 EIF3HO15372 352 aaKnown RBP eCLIP4.72□□□□□ -1.651e-7■■■■■ 27.4
CHD9-201ENST00000219084 CD2BP2O95400 341 aaKnown RBP4.72□□□□□ -1.65
CHD9-201ENST00000219084 CA4P22748 312 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 ATP5OP48047 213 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 IFRD2Q12894 506 aaPredicted RBP4.72□□□□□ -1.65
CHD9-201ENST00000219084 MESDQ14696 234 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 DNAL1Q4LDG9 190 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 SLFN13Q68D06 897 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 LRRC8BQ6P9F7 803 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 ACRBPQ8NEB7 543 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 RFFLQ8WZ73 363 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 CMTM5Q96DZ9 223 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 KCND1Q9NSA2 647 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 KLC4Q9NSK0 619 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 TBC1D22BQ9NU19 505 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 NSMCE4AQ9NXX6 385 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 PI4KBQ9UBF8 816 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 NFU1Q9UMS0 254 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 TNS3Q68CZ2 1445 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 PMS2P54278 862 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 CCNA1P78396 465 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 TFDP2Q14188 446 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 SYDE2Q5VT97 1194 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 PPWD1Q96BP3 646 aaKnown RBP4.72□□□□□ -1.65
CHD9-201ENST00000219084 TUFT1Q9NNX1 390 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 ADGRG1Q9Y653 693 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 METP08581 1390 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 PIK3R2O00459 728 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 PRDM1O75626 825 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 PRPF38AQ8NAV1 312 aaKnown RBP4.72□□□□□ -1.65
CHD9-201ENST00000219084 GPKOWQ92917 476 aaPredicted RBP eCLIP4.72□□□□□ -1.653e-8■■■■□ 26
CHD9-201ENST00000219084 CNPY3Q9BT09 278 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 CCSER1Q9C0I3 900 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 LY9Q9HBG7 655 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 ASNSD1Q9NWL6 643 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 BARHL2Q9NY43 387 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 ZNF212Q9UDV6 495 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 ATXN2Q99700 1313 aaKnown RBP4.72□□□□□ -1.65
CHD9-201ENST00000219084 GOLGA8IPA6NC78 632 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 P4HA2O15460 535 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 MEFVO15553 781 aaPredicted RBP4.72□□□□□ -1.65
CHD9-201ENST00000219084 PALMO75781 387 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 SEC31AO94979 1220 aaKnown RBP4.72□□□□□ -1.65
CHD9-201ENST00000219084 ITIH4Q14624 930 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 SPDYCQ5MJ68 293 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 TTBK2Q6IQ55 1244 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 SETD3Q86TU7 594 aaPredicted RBP4.72□□□□□ -1.65
CHD9-201ENST00000219084 SIRT2Q8IXJ6 389 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 ARMC2Q8NEN0 867 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 MAML3Q96JK9 1138 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 SIKE1Q9BRV8 207 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 ARL2BPQ9Y2Y0 163 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 TTC36A6NLP5 189 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 RASA4BC9J798 803 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 RASA4O43374 803 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 MAN1A2O60476 641 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 SRGAP2CP0DJJ0 459 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 EDRF1Q3B7T1 1238 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 HPS3Q969F9 1004 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 SPDL1Q96EA4 605 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 NUDCD1Q96RS6 583 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 UVRAGQ9P2Y5 699 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 CSADQ9Y600 493 aa4.72□□□□□ -1.65
CHD9-201ENST00000219084 PITPNM2Q9BZ72 1349 aa4.71□□□□□ -1.65
CHD9-201ENST00000219084 ZBTB5O15062 677 aa4.71□□□□□ -1.65
CHD9-201ENST00000219084 PSMD3O43242 534 aa4.71□□□□□ -1.65
CHD9-201ENST00000219084 DLATP10515 647 aaKnown RBP4.71□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms