RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 TTLL11Q8NHH1 800 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 OSBPL9Q96SU4 736 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 YEATS2Q9ULM3 1422 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 PNMA6FA0A0J9YX94 578 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 USP17L15C9J2P7 530 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 USP17L13C9JLJ4 530 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 USP17L11C9JVI0 530 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 USP17L18D6R9N7 530 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 USP17L22D6RA61 530 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 USP17L17D6RBQ6 530 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 USP17L19D6RCP7 530 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 USP17L20D6RJB6 530 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 MARK3P27448 753 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 ATICP31939 592 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 USP17L24Q0WX57 530 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 C1orf146Q5VVC0 180 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 USP17L6PQ6QN14 398 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 EPM2AIP1Q7L775 607 aaPredicted RBP16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 MAGI2Q86UL8 1455 aa16.02■□□□□ 0.16
NDFIP2-201ENST00000218652 SYNGAP1Q96PV0 1343 aa16.02■□□□□ 0.16
NDFIP2-201ENST00000218652 TTI1O43156 1089 aa16.02■□□□□ 0.16
NDFIP2-201ENST00000218652 EPHA10Q5JZY3 1008 aa16.02■□□□□ 0.16
NDFIP2-201ENST00000218652 SLC12A6Q9UHW9 1150 aa16.02■□□□□ 0.16
NDFIP2-201ENST00000218652 YWHAHQ04917 246 aaPredicted RBP16.02■□□□□ 0.16
NDFIP2-201ENST00000218652 SMAD1Q15797 465 aaKnown RBP16.02■□□□□ 0.16
NDFIP2-201ENST00000218652 KIF19Q2TAC6 998 aa16.02■□□□□ 0.16
NDFIP2-201ENST00000218652 ANGPTL8Q6UXH0 198 aa16.02■□□□□ 0.16
NDFIP2-201ENST00000218652 OR6B3Q8NGW1 331 aa16.02■□□□□ 0.16
NDFIP2-201ENST00000218652 ALKBH8Q96BT7 664 aaKnown RBP16.02■□□□□ 0.16
NDFIP2-201ENST00000218652 BEGAINQ9BUH8 593 aa16.02■□□□□ 0.16
NDFIP2-201ENST00000218652 SUN2Q9UH99 717 aa16.02■□□□□ 0.16
NDFIP2-201ENST00000218652 SERPINB2P05120 415 aa16.02■□□□□ 0.15
NDFIP2-201ENST00000218652 CYP2D6P10635 497 aa16.02■□□□□ 0.15
NDFIP2-201ENST00000218652 GPC5P78333 572 aa16.02■□□□□ 0.15
NDFIP2-201ENST00000218652 MTF1Q14872 753 aa16.02■□□□□ 0.15
NDFIP2-201ENST00000218652 ZNF667Q5HYK9 610 aa16.02■□□□□ 0.15
NDFIP2-201ENST00000218652 CCNYL1Q8N7R7 359 aa16.02■□□□□ 0.15
NDFIP2-201ENST00000218652 TMEM35BQ8NCS4 154 aa16.02■□□□□ 0.15
NDFIP2-201ENST00000218652 RNF139Q8WU17 664 aa16.02■□□□□ 0.15
NDFIP2-201ENST00000218652 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.02■□□□□ 0.152e-6■■■■■ 54.9
NDFIP2-201ENST00000218652 OLA1Q9NTK5 396 aaKnown RBP16.02■□□□□ 0.15
NDFIP2-201ENST00000218652 CEP72Q9P209 647 aa16.02■□□□□ 0.15
NDFIP2-201ENST00000218652 RNF103-CHMP3A0A140T963 221 aa16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 CHEK2O96017 543 aa16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 NR3C1P04150 777 aa16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 HSPA8P11142 646 aaKnown RBP16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 SOX5P35711 763 aa16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 NFX1Q12986 1120 aaKnown RBP16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 POLR3CQ9BUI4 534 aaPredicted RBP16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 KLC2Q9H0B6 622 aa16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 PCSK1NQ9UHG2 260 aa16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 ADGRL2O95490 1459 aa16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 CACNB3P54284 484 aa16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 TAF1BQ53T94 588 aaPredicted RBP16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 KIAA1841Q6NSI8 718 aa16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 METTL23Q86XA0 190 aa16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 TBC1D10CQ8IV04 446 aa16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 CENPKQ9BS16 269 aa16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 ZFP69BQ9UJL9 534 aa16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 PP2D1A8MPX8 630 aa16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 BBOX1O75936 387 aa16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 PPP2R2AP63151 447 aa16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 DPY19L2Q6NUT2 758 aa16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 XXYLT1Q8NBI6 393 aa16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 DCPSQ96C86 337 aaKnown RBP16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 WDR24Q96S15 920 aa16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 FOXN1O15353 648 aa16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 HAUS5O94927 633 aa16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 RWDD4Q6NW29 188 aaKnown RBP16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 KLC3Q6P597 504 aa16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 TMEM270Q6UE05 265 aa16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 ARMCX2Q7L311 632 aa16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 TRIM59Q8IWR1 403 aa16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 GPR101Q96P66 508 aaPredicted RBP16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 DHX36Q9H2U1 1008 aaKnown RBP16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 RPF1Q9H9Y2 349 aaKnown RBP16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 CYP4F11Q9HBI6 524 aa16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 KLHL8Q9P2G9 620 aaPredicted RBP16.01■□□□□ 0.15
NDFIP2-201ENST00000218652 E2F6O75461 281 aa16■□□□□ 0.15
NDFIP2-201ENST00000218652 PRR29P0C7W0 189 aa16■□□□□ 0.15
NDFIP2-201ENST00000218652 PRDX5P30044 214 aa16■□□□□ 0.15
NDFIP2-201ENST00000218652 TFDP2Q14188 446 aa16■□□□□ 0.15
NDFIP2-201ENST00000218652 TXNRD1Q16881 649 aa16■□□□□ 0.15
NDFIP2-201ENST00000218652 TBC1D9BQ66K14 1250 aa16■□□□□ 0.15
NDFIP2-201ENST00000218652 RNF207Q6ZRF8 634 aa16■□□□□ 0.15
NDFIP2-201ENST00000218652 NOP14P78316 857 aaKnown RBP16■□□□□ 0.15
NDFIP2-201ENST00000218652 ARHGAP27Q6ZUM4 889 aa16■□□□□ 0.15
NDFIP2-201ENST00000218652 NBPF3Q9H094 633 aa16■□□□□ 0.15
NDFIP2-201ENST00000218652 FAM49AQ9H0Q0 323 aaPredicted RBP16■□□□□ 0.15
NDFIP2-201ENST00000218652 ING2Q9H160 280 aa16■□□□□ 0.15
NDFIP2-201ENST00000218652 PPEF1O14829 653 aaPredicted RBP16■□□□□ 0.15
NDFIP2-201ENST00000218652 PMS2P54278 862 aa16■□□□□ 0.15
NDFIP2-201ENST00000218652 CDR2Q01850 454 aa16■□□□□ 0.15
NDFIP2-201ENST00000218652 MORF4L2Q15014 288 aa16■□□□□ 0.15
NDFIP2-201ENST00000218652 RFX8Q6ZV50 586 aa16■□□□□ 0.15
NDFIP2-201ENST00000218652 KRT27Q7Z3Y8 459 aa16■□□□□ 0.15
NDFIP2-201ENST00000218652 SLC44A5Q8NCS7 719 aa16■□□□□ 0.15
NDFIP2-201ENST00000218652 FAM161BQ96MY7 647 aa16■□□□□ 0.15
NDFIP2-201ENST00000218652 LBHD1Q9BQE6 289 aaPredicted RBP16■□□□□ 0.15
NDFIP2-201ENST00000218652 ZDHHC9Q9Y397 364 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms