RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 Q4G0T1 1027 aa24.99■■□□□ 1.59
VTI1B-201ENST00000216456 CMTR2Q8IYT2 770 aaKnown RBP24.99■■□□□ 1.59
VTI1B-201ENST00000216456 OXER1Q8TDS5 423 aa24.99■■□□□ 1.59
VTI1B-201ENST00000216456 RIT2Q99578 217 aa24.99■■□□□ 1.59
VTI1B-201ENST00000216456 C11orf84Q9BUA3 381 aaPredicted RBP24.99■■□□□ 1.59
VTI1B-201ENST00000216456 KIAA1671Q9BY89 1806 aa24.99■■□□□ 1.59
VTI1B-201ENST00000216456 PLAGL2Q9UPG8 496 aa24.99■■□□□ 1.59
VTI1B-201ENST00000216456 AKT3Q9Y243 479 aa24.99■■□□□ 1.59
VTI1B-201ENST00000216456 PCDHGC5Q9Y5F6 944 aa24.99■■□□□ 1.59
VTI1B-201ENST00000216456 CTDNEP1O95476 244 aa24.98■■□□□ 1.59
VTI1B-201ENST00000216456 ITGB1P05556 798 aa24.98■■□□□ 1.59
VTI1B-201ENST00000216456 FGFR4P22455 802 aa24.98■■□□□ 1.59
VTI1B-201ENST00000216456 CRYBB1P53674 252 aaPredicted RBP24.98■■□□□ 1.59
VTI1B-201ENST00000216456 NLRP11P59045 1033 aaKnown RBP24.98■■□□□ 1.59
VTI1B-201ENST00000216456 DLX2Q07687 328 aaPredicted RBP24.98■■□□□ 1.59
VTI1B-201ENST00000216456 HYAL1Q12794 435 aa24.98■■□□□ 1.59
VTI1B-201ENST00000216456 DAGLBQ8NCG7 672 aa24.98■■□□□ 1.59
VTI1B-201ENST00000216456 NEK9Q8TD19 979 aa24.98■■□□□ 1.59
VTI1B-201ENST00000216456 ADAMTS10Q9H324 1103 aa24.98■■□□□ 1.59
VTI1B-201ENST00000216456 PPP4R2Q9NY27 417 aa24.98■■□□□ 1.59
VTI1B-201ENST00000216456 CLDND1Q9NY35 253 aa24.98■■□□□ 1.59
VTI1B-201ENST00000216456 LRFN2Q9ULH4 789 aa24.98■■□□□ 1.59
VTI1B-201ENST00000216456 WDR81Q562E7 1941 aa24.97■■□□□ 1.59
VTI1B-201ENST00000216456 DENND3A2RUS2 1198 aa24.97■■□□□ 1.59
VTI1B-201ENST00000216456 C9IYK1 514 aa24.97■■□□□ 1.59
VTI1B-201ENST00000216456 CSDE1O75534 798 aaKnown RBP24.97■■□□□ 1.59
VTI1B-201ENST00000216456 STBD1O95210 358 aa24.97■■□□□ 1.59
VTI1B-201ENST00000216456 LARGE1O95461 756 aa24.97■■□□□ 1.59
VTI1B-201ENST00000216456 STAG3L1P0CL83 205 aa24.97■■□□□ 1.59
VTI1B-201ENST00000216456 FGFR1P11362 822 aa24.97■■□□□ 1.59
VTI1B-201ENST00000216456 IRS1P35568 1242 aa24.97■■□□□ 1.59
VTI1B-201ENST00000216456 LTBRP36941 435 aa24.97■■□□□ 1.59
VTI1B-201ENST00000216456 CLUL1Q15846 466 aa24.97■■□□□ 1.59
VTI1B-201ENST00000216456 PTCRAQ6ISU1 281 aaPredicted RBP24.97■■□□□ 1.59
VTI1B-201ENST00000216456 B3GNT9Q6UX72 402 aa24.97■■□□□ 1.59
VTI1B-201ENST00000216456 MIER3Q7Z3K6 550 aa24.97■■□□□ 1.59
VTI1B-201ENST00000216456 KLHL23Q8NBE8 558 aa24.97■■□□□ 1.59
VTI1B-201ENST00000216456 ETNPPLQ8TBG4 499 aa24.97■■□□□ 1.59
VTI1B-201ENST00000216456 RGS18Q9NS28 235 aa24.97■■□□□ 1.59
VTI1B-201ENST00000216456 CYP3A7-CYP3A51PA0A087WV96 503 aa24.96■■□□□ 1.59
VTI1B-201ENST00000216456 FAM205CA6NFA0 338 aa24.96■■□□□ 1.59
VTI1B-201ENST00000216456 TBKBP1A7MCY6 615 aa24.96■■□□□ 1.59
VTI1B-201ENST00000216456 LINC01565O15544 149 aa24.96■■□□□ 1.59
VTI1B-201ENST00000216456 CYP3A7P24462 503 aa24.96■■□□□ 1.59
VTI1B-201ENST00000216456 AK2P54819 239 aa24.96■■□□□ 1.59
VTI1B-201ENST00000216456 DSC3Q14574 896 aa24.96■■□□□ 1.59
VTI1B-201ENST00000216456 EARS2Q5JPH6 523 aaKnown RBP24.96■■□□□ 1.59
VTI1B-201ENST00000216456 ADGRD2Q7Z7M1 963 aa24.96■■□□□ 1.59
VTI1B-201ENST00000216456 NECAB1Q8N987 351 aa24.96■■□□□ 1.59
VTI1B-201ENST00000216456 SPPL3Q8TCT6 385 aa24.96■■□□□ 1.59
VTI1B-201ENST00000216456 PABPC5Q96DU9 382 aaKnown RBP24.96■■□□□ 1.59
VTI1B-201ENST00000216456 FAM167AQ96KS9 214 aa24.96■■□□□ 1.59
VTI1B-201ENST00000216456 MBOAT7Q96N66 472 aa24.96■■□□□ 1.59
VTI1B-201ENST00000216456 PHF20Q9BVI0 1012 aa24.96■■□□□ 1.59
VTI1B-201ENST00000216456 SLKQ9H2G2 1235 aaPredicted RBP24.96■■□□□ 1.59
VTI1B-201ENST00000216456 IGFLR1Q9H665 355 aa24.96■■□□□ 1.59
VTI1B-201ENST00000216456 RWDD3Q9Y3V2 267 aa24.96■■□□□ 1.59
VTI1B-201ENST00000216456 PCDHB7Q9Y5E2 793 aa24.96■■□□□ 1.59
VTI1B-201ENST00000216456 EML1O00423 815 aa24.95■■□□□ 1.58
VTI1B-201ENST00000216456 GPR182O15218 404 aa24.95■■□□□ 1.58
VTI1B-201ENST00000216456 PFKFB2O60825 505 aa24.95■■□□□ 1.58
VTI1B-201ENST00000216456 COL9A1P20849 921 aa24.95■■□□□ 1.58
VTI1B-201ENST00000216456 JAK3P52333 1124 aa24.95■■□□□ 1.58
VTI1B-201ENST00000216456 COL19A1Q14993 1142 aa24.95■■□□□ 1.58
VTI1B-201ENST00000216456 NONOQ15233 471 aaKnown RBP eCLIP24.95■■□□□ 1.58
VTI1B-201ENST00000216456 LETM2Q2VYF4 491 aa24.95■■□□□ 1.58
VTI1B-201ENST00000216456 MTERF2Q49AM1 385 aa24.95■■□□□ 1.58
VTI1B-201ENST00000216456 CPLX2Q6PUV4 134 aaKnown RBP24.95■■□□□ 1.58
VTI1B-201ENST00000216456 NRBP2Q9NSY0 501 aa24.95■■□□□ 1.58
VTI1B-201ENST00000216456 SEPT9Q9UHD8 586 aaPredicted RBP24.95■■□□□ 1.58
VTI1B-201ENST00000216456 DDX25Q9UHL0 483 aaKnown RBP24.95■■□□□ 1.58
VTI1B-201ENST00000216456 CEP131Q9UPN4 1083 aa24.95■■□□□ 1.58
VTI1B-201ENST00000216456 GRXCR2A6NFK2 248 aa24.94■■□□□ 1.58
VTI1B-201ENST00000216456 MAGEB2O15479 319 aa24.94■■□□□ 1.58
VTI1B-201ENST00000216456 MMP1P03956 469 aa24.94■■□□□ 1.58
VTI1B-201ENST00000216456 SFNP31947 248 aa24.94■■□□□ 1.58
VTI1B-201ENST00000216456 TARBP2Q15633 366 aaKnown RBP24.94■■□□□ 1.58
VTI1B-201ENST00000216456 SLC24A5Q71RS6 500 aa24.94■■□□□ 1.58
VTI1B-201ENST00000216456 FAM178BQ8IXR5 827 aa24.94■■□□□ 1.58
VTI1B-201ENST00000216456 CEP89Q96ST8 783 aa24.94■■□□□ 1.58
VTI1B-201ENST00000216456 PLVAPQ9BX97 442 aa24.94■■□□□ 1.58
VTI1B-201ENST00000216456 C5orf42Q9H799 3197 aa24.94■■□□□ 1.58
VTI1B-201ENST00000216456 GPC3P51654 580 aa24.93■■□□□ 1.58
VTI1B-201ENST00000216456 POF1BQ8WVV4 589 aa24.93■■□□□ 1.58
VTI1B-201ENST00000216456 MAP7D2Q96T17 732 aa24.93■■□□□ 1.58
VTI1B-201ENST00000216456 C22orf23Q9BZE7 217 aa24.93■■□□□ 1.58
VTI1B-201ENST00000216456 LMAN2LQ9H0V9 348 aa24.93■■□□□ 1.58
VTI1B-201ENST00000216456 RNF19AQ9NV58 838 aa24.93■■□□□ 1.58
VTI1B-201ENST00000216456 SEC24BO95487 1268 aa24.92■■□□□ 1.58
VTI1B-201ENST00000216456 FDPSP14324 419 aaKnown RBP24.92■■□□□ 1.58
VTI1B-201ENST00000216456 FOSBP53539 338 aa24.92■■□□□ 1.58
VTI1B-201ENST00000216456 TBC1D8BQ0IIM8 1120 aa24.92■■□□□ 1.58
VTI1B-201ENST00000216456 PLA2G4FQ68DD2 849 aa24.92■■□□□ 1.58
VTI1B-201ENST00000216456 PIK3AP1Q6ZUJ8 805 aa24.92■■□□□ 1.58
VTI1B-201ENST00000216456 KRT25Q7Z3Z0 450 aa24.92■■□□□ 1.58
VTI1B-201ENST00000216456 C1orf112Q9NSG2 853 aa24.92■■□□□ 1.58
VTI1B-201ENST00000216456 TYW1Q9NV66 732 aaKnown RBP24.92■■□□□ 1.58
VTI1B-201ENST00000216456 TBX10O75333 385 aa24.91■■□□□ 1.58
VTI1B-201ENST00000216456 FAM189BP81408 668 aa24.91■■□□□ 1.58
VTI1B-201ENST00000216456 ME3Q16798 604 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms