RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 SETD1AO15047 1707 aaKnown RBP12.46□□□□□ -0.42
DNMT3B-201ENST00000201963 PLEKP08567 350 aaPredicted RBP12.45□□□□□ -0.42
DNMT3B-201ENST00000201963 SKIP12755 728 aa12.45□□□□□ -0.42
DNMT3B-201ENST00000201963 MAP7Q14244 749 aa12.45□□□□□ -0.42
DNMT3B-201ENST00000201963 TMED2Q15363 201 aa12.45□□□□□ -0.42
DNMT3B-201ENST00000201963 CTAGE3PQ8IX95 158 aa12.45□□□□□ -0.42
DNMT3B-201ENST00000201963 PPM1KQ8N3J5 372 aa12.45□□□□□ -0.42
DNMT3B-201ENST00000201963 PITPNM3Q9BZ71 974 aa12.45□□□□□ -0.42
DNMT3B-201ENST00000201963 EMILIN3Q9NT22 766 aa12.45□□□□□ -0.42
DNMT3B-201ENST00000201963 PI4KBQ9UBF8 816 aa12.45□□□□□ -0.42
DNMT3B-201ENST00000201963 DAGLAQ9Y4D2 1042 aa12.45□□□□□ -0.42
DNMT3B-201ENST00000201963 GCFC2P16383 781 aaKnown RBP12.45□□□□□ -0.42
DNMT3B-201ENST00000201963 PRR16Q569H4 304 aa12.45□□□□□ -0.42
DNMT3B-201ENST00000201963 CFAP157Q5JU67 520 aa12.45□□□□□ -0.42
DNMT3B-201ENST00000201963 ANKRD35Q8N283 1001 aa12.45□□□□□ -0.42
DNMT3B-201ENST00000201963 CPVLQ9H3G5 476 aa12.45□□□□□ -0.42
DNMT3B-201ENST00000201963 AS3MTQ9HBK9 375 aa12.45□□□□□ -0.42
DNMT3B-201ENST00000201963 TCHHQ07283 1943 aa12.45□□□□□ -0.42
DNMT3B-201ENST00000201963 NMT2O60551 498 aa12.45□□□□□ -0.42
DNMT3B-201ENST00000201963 NCAPG2Q86XI2 1143 aa12.45□□□□□ -0.42
DNMT3B-201ENST00000201963 TYW1Q9NV66 732 aaKnown RBP12.45□□□□□ -0.42
DNMT3B-201ENST00000201963 GCNT4Q9P109 453 aa12.45□□□□□ -0.42
DNMT3B-201ENST00000201963 CAPN6Q9Y6Q1 641 aa12.45□□□□□ -0.42
DNMT3B-201ENST00000201963 GSG1L2A8MUP6 293 aa12.45□□□□□ -0.42
DNMT3B-201ENST00000201963 I3L4J1 428 aa12.45□□□□□ -0.42
DNMT3B-201ENST00000201963 SCP2P22307 547 aa12.45□□□□□ -0.42
DNMT3B-201ENST00000201963 MSH2P43246 934 aa12.45□□□□□ -0.42
DNMT3B-201ENST00000201963 APOBEC3FQ8IUX4 373 aaKnown RBP12.45□□□□□ -0.42
DNMT3B-201ENST00000201963 ZNF341Q9BYN7 854 aa12.45□□□□□ -0.42
DNMT3B-201ENST00000201963 CEP72Q9P209 647 aa12.45□□□□□ -0.42
DNMT3B-201ENST00000201963 PNMA2Q9UL42 364 aa12.45□□□□□ -0.42
DNMT3B-201ENST00000201963 WDR91A4D1P6 747 aa12.44□□□□□ -0.42
DNMT3B-201ENST00000201963 PFDN1O60925 122 aa12.44□□□□□ -0.42
DNMT3B-201ENST00000201963 ECEL1O95672 775 aa12.44□□□□□ -0.42
DNMT3B-201ENST00000201963 PCP11498 1178 aaKnown RBP12.44□□□□□ -0.42
DNMT3B-201ENST00000201963 TBX2Q13207 712 aaPredicted RBP12.44□□□□□ -0.42
DNMT3B-201ENST00000201963 PPP4R3AQ6IN85 833 aa12.44□□□□□ -0.42
DNMT3B-201ENST00000201963 SUGP1Q8IWZ8 645 aaKnown RBP12.44□□□□□ -0.42
DNMT3B-201ENST00000201963 MAIP1Q8WWC4 291 aa12.44□□□□□ -0.42
DNMT3B-201ENST00000201963 ECT2Q9H8V3 914 aa12.44□□□□□ -0.42
DNMT3B-201ENST00000201963 ATP8A2Q9NTI2 1148 aa12.44□□□□□ -0.42
DNMT3B-201ENST00000201963 RAD51CO43502 376 aa12.44□□□□□ -0.42
DNMT3B-201ENST00000201963 ALAS1P13196 640 aa12.44□□□□□ -0.42
DNMT3B-201ENST00000201963 KIF22Q14807 665 aa12.44□□□□□ -0.42
DNMT3B-201ENST00000201963 SGO2Q562F6 1265 aa12.44□□□□□ -0.42
DNMT3B-201ENST00000201963 DPH6Q7L8W6 267 aa12.44□□□□□ -0.42
DNMT3B-201ENST00000201963 PSTPIP2Q9H939 334 aa12.44□□□□□ -0.42
DNMT3B-201ENST00000201963 TXNDC16Q9P2K2 825 aa12.44□□□□□ -0.42
DNMT3B-201ENST00000201963 NOC2LQ9Y3T9 749 aaKnown RBP12.44□□□□□ -0.42
DNMT3B-201ENST00000201963 AKAP12Q02952 1782 aa12.44□□□□□ -0.42
DNMT3B-201ENST00000201963 CFAP73A6NFT4 308 aa12.44□□□□□ -0.42
DNMT3B-201ENST00000201963 ADM5C9JUS6 153 aa12.44□□□□□ -0.42
DNMT3B-201ENST00000201963 SMTNP53814 917 aa12.44□□□□□ -0.42
DNMT3B-201ENST00000201963 STK4Q13043 487 aa12.44□□□□□ -0.42
DNMT3B-201ENST00000201963 SEPT2Q15019 361 aa12.44□□□□□ -0.42
DNMT3B-201ENST00000201963 CCDC110Q8TBZ0 833 aa12.44□□□□□ -0.42
DNMT3B-201ENST00000201963 HDAC7Q8WUI4 952 aa12.44□□□□□ -0.42
DNMT3B-201ENST00000201963 NSMCE1Q8WV22 266 aa12.44□□□□□ -0.42
DNMT3B-201ENST00000201963 OSBPL1AQ9BXW6 950 aa12.44□□□□□ -0.42
DNMT3B-201ENST00000201963 ZNF148Q9UQR1 794 aa12.44□□□□□ -0.42
DNMT3B-201ENST00000201963 CA4P22748 312 aa12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 PMS2P54278 862 aa12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 RCN2Q14257 317 aa12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 PSMD6Q15008 389 aa12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 LRRC23Q53EV4 343 aaPredicted RBP12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 C10orf76Q5T2E6 689 aa12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 LIN9Q5TKA1 542 aa12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 USP17L2Q6R6M4 530 aa12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 PPP1R21Q6ZMI0 780 aa12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 UNC13DQ70J99 1090 aa12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 SRRM1Q8IYB3 904 aaKnown RBP12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 RPUSD2Q8IZ73 545 aaKnown RBP12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 COA7Q96BR5 231 aa12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 MAP3K14Q99558 947 aa12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 LBHD1Q9BQE6 289 aaPredicted RBP12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.43□□□□□ -0.426e-7■■■■■ 29.7
DNMT3B-201ENST00000201963 GOLPH3Q9H4A6 298 aa12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 ADARB2Q9NS39 739 aaKnown RBP12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 INTS13Q9NVM9 706 aa12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 POTEMA6NI47 508 aa12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 DDX39AO00148 427 aaKnown RBP12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 SORBS3O60504 671 aa12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 ATF7P17544 494 aaPredicted RBP12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 STRN3Q13033 797 aa12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 PAPD7Q5XG87 772 aaKnown RBP12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 ZC3H18Q86VM9 953 aaKnown RBP12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 FAM178BQ8IXR5 827 aa12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 MDM1Q8TC05 714 aa12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 GRID2IPA4D2P6 1211 aa12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 TTI1O43156 1089 aa12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 SKAP2O75563 359 aaPredicted RBP12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 CFBP00751 764 aa12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 HOXA10P31260 410 aaPredicted RBP12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 RFX5P48382 616 aaPredicted RBP12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 RAD23BP54727 409 aa12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 DCUN1D2Q6PH85 259 aa12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 KIF2BQ8N4N8 673 aa12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 CCDC127Q96BQ5 260 aa12.43□□□□□ -0.42
DNMT3B-201ENST00000201963 FNBP1Q96RU3 617 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms