RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 SGSM3Q96HU1 749 aa14.05□□□□□ -0.16
PCDHB4-201ENST00000194152 MS4A14Q96JA4 679 aa14.05□□□□□ -0.16
PCDHB4-201ENST00000194152 CEP170P1Q96L14 293 aa14.05□□□□□ -0.16
PCDHB4-201ENST00000194152 MYOZ2Q9NPC6 264 aa14.05□□□□□ -0.16
PCDHB4-201ENST00000194152 GSTTP1A0A1W2PQM5 241 aa14.05□□□□□ -0.16
PCDHB4-201ENST00000194152 TUBBP07437 444 aa14.05□□□□□ -0.16
PCDHB4-201ENST00000194152 FGRP09769 529 aa14.05□□□□□ -0.16
PCDHB4-201ENST00000194152 SPATS2LQ9NUQ6 558 aaKnown RBP14.05□□□□□ -0.16
PCDHB4-201ENST00000194152 NYAP2Q9P242 653 aa14.05□□□□□ -0.16
PCDHB4-201ENST00000194152 MYBL1P10243 752 aa14.04□□□□□ -0.16
PCDHB4-201ENST00000194152 TNFAIP3P21580 790 aa14.04□□□□□ -0.16
PCDHB4-201ENST00000194152 LIMA1Q9UHB6 759 aaKnown RBP14.04□□□□□ -0.16
PCDHB4-201ENST00000194152 TNNI1P19237 187 aa14.04□□□□□ -0.16
PCDHB4-201ENST00000194152 VPS41P49754 854 aa14.04□□□□□ -0.16
PCDHB4-201ENST00000194152 GSCP56915 257 aaPredicted RBP14.04□□□□□ -0.16
PCDHB4-201ENST00000194152 MTMR1Q13613 665 aa14.04□□□□□ -0.16
PCDHB4-201ENST00000194152 RNF207Q6ZRF8 634 aa14.04□□□□□ -0.16
PCDHB4-201ENST00000194152 SH3RF1Q7Z6J0 888 aa14.04□□□□□ -0.16
PCDHB4-201ENST00000194152 CDR2LQ86X02 465 aaPredicted RBP14.04□□□□□ -0.16
PCDHB4-201ENST00000194152 METTL13Q8N6R0 699 aa14.04□□□□□ -0.16
PCDHB4-201ENST00000194152 TAAR1Q96RJ0 339 aa14.04□□□□□ -0.16
PCDHB4-201ENST00000194152 MMS19Q96T76 1030 aa14.04□□□□□ -0.16
PCDHB4-201ENST00000194152 CUEDC2Q9H467 287 aa14.04□□□□□ -0.16
PCDHB4-201ENST00000194152 KCND1Q9NSA2 647 aa14.04□□□□□ -0.16
PCDHB4-201ENST00000194152 RNF146Q9NTX7 359 aa14.04□□□□□ -0.16
PCDHB4-201ENST00000194152 SERPINA10Q9UK55 444 aa14.04□□□□□ -0.16
PCDHB4-201ENST00000194152 PCDHA13Q9Y5I0 950 aa14.04□□□□□ -0.16
PCDHB4-201ENST00000194152 ITGB4P16144 1822 aa14.04□□□□□ -0.16
PCDHB4-201ENST00000194152 SYF2O95926 243 aaKnown RBP14.04□□□□□ -0.16
PCDHB4-201ENST00000194152 CYP11B2P19099 503 aa14.04□□□□□ -0.16
PCDHB4-201ENST00000194152 CEP55Q53EZ4 464 aa14.04□□□□□ -0.16
PCDHB4-201ENST00000194152 CDKAL1Q5VV42 579 aa14.04□□□□□ -0.16
PCDHB4-201ENST00000194152 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.04□□□□□ -0.16
PCDHB4-201ENST00000194152 AP1M1Q9BXS5 423 aa14.04□□□□□ -0.16
PCDHB4-201ENST00000194152 PARVGQ9HBI0 331 aa14.04□□□□□ -0.16
PCDHB4-201ENST00000194152 COL4A1P02462 1669 aa14.03□□□□□ -0.16
PCDHB4-201ENST00000194152 TOGARAM1Q9Y4F4 1720 aa14.03□□□□□ -0.16
PCDHB4-201ENST00000194152 NR3C1P04150 777 aa14.03□□□□□ -0.16
PCDHB4-201ENST00000194152 TNFAIP1Q13829 316 aa14.03□□□□□ -0.16
PCDHB4-201ENST00000194152 SEZ6Q53EL9 994 aa14.03□□□□□ -0.16
PCDHB4-201ENST00000194152 UBLCP1Q8WVY7 318 aaPredicted RBP14.03□□□□□ -0.16
PCDHB4-201ENST00000194152 DYDC1Q8WWB3 177 aa14.03□□□□□ -0.16
PCDHB4-201ENST00000194152 OTUD5Q96G74 571 aa14.03□□□□□ -0.16
PCDHB4-201ENST00000194152 FAM163AQ96GL9 167 aaPredicted RBP14.03□□□□□ -0.16
PCDHB4-201ENST00000194152 TSGA10Q9BZW7 698 aa14.03□□□□□ -0.16
PCDHB4-201ENST00000194152 GLT8D2Q9H1C3 349 aa14.03□□□□□ -0.16
PCDHB4-201ENST00000194152 GGA3Q9NZ52 723 aa14.03□□□□□ -0.16
PCDHB4-201ENST00000194152 HACL1Q9UJ83 578 aa14.03□□□□□ -0.16
PCDHB4-201ENST00000194152 USTQ9Y2C2 406 aa14.03□□□□□ -0.16
PCDHB4-201ENST00000194152 KLRC4O43908 158 aa14.03□□□□□ -0.16
PCDHB4-201ENST00000194152 CLTAP09496 248 aa14.03□□□□□ -0.16
PCDHB4-201ENST00000194152 PADI6Q6TGC4 694 aa14.03□□□□□ -0.16
PCDHB4-201ENST00000194152 DAAM2Q86T65 1068 aa14.03□□□□□ -0.16
PCDHB4-201ENST00000194152 IRF2BP1Q8IU81 584 aa14.03□□□□□ -0.16
PCDHB4-201ENST00000194152 CTTNBP2NLQ9P2B4 639 aa14.03□□□□□ -0.16
PCDHB4-201ENST00000194152 PDS5AQ29RF7 1337 aaKnown RBP14.03□□□□□ -0.16
PCDHB4-201ENST00000194152 HNRNPDLO14979 420 aaKnown RBP14.03□□□□□ -0.16
PCDHB4-201ENST00000194152 EIF3HO15372 352 aaKnown RBP eCLIP14.03□□□□□ -0.16
PCDHB4-201ENST00000194152 PPP1R2P41236 205 aa14.03□□□□□ -0.16
PCDHB4-201ENST00000194152 PPP1R7Q15435 360 aa14.03□□□□□ -0.16
PCDHB4-201ENST00000194152 TRIM58Q8NG06 486 aa14.03□□□□□ -0.16
PCDHB4-201ENST00000194152 TCP11Q8WWU5 503 aa14.03□□□□□ -0.16
PCDHB4-201ENST00000194152 POMGNT1Q8WZA1 660 aa14.03□□□□□ -0.16
PCDHB4-201ENST00000194152 ZBTB10Q96DT7 871 aa14.03□□□□□ -0.16
PCDHB4-201ENST00000194152 YIPF3Q9GZM5 350 aa14.03□□□□□ -0.16
PCDHB4-201ENST00000194152 KIF9Q9HAQ2 790 aa14.03□□□□□ -0.16
PCDHB4-201ENST00000194152 MEFVO15553 781 aaPredicted RBP14.02□□□□□ -0.16
PCDHB4-201ENST00000194152 PRPHP41219 470 aa14.02□□□□□ -0.16
PCDHB4-201ENST00000194152 RPS6P62753 249 aaKnown RBP14.02□□□□□ -0.16
PCDHB4-201ENST00000194152 EPC2Q52LR7 807 aa14.02□□□□□ -0.16
PCDHB4-201ENST00000194152 ZNF394Q53GI3 561 aa14.02□□□□□ -0.16
PCDHB4-201ENST00000194152 C2CD6Q53TS8 623 aa14.02□□□□□ -0.16
PCDHB4-201ENST00000194152 KIAA1755Q5JYT7 1200 aa14.02□□□□□ -0.16
PCDHB4-201ENST00000194152 FAM151AQ8WW52 585 aa14.02□□□□□ -0.16
PCDHB4-201ENST00000194152 C7orf25Q9BPX7 421 aa14.02□□□□□ -0.16
PCDHB4-201ENST00000194152 DPH5Q9H2P9 285 aa14.02□□□□□ -0.16
PCDHB4-201ENST00000194152 VCPKMTQ9H867 229 aa14.02□□□□□ -0.16
PCDHB4-201ENST00000194152 LARSQ9P2J5 1176 aaKnown RBP14.02□□□□□ -0.16
PCDHB4-201ENST00000194152 RPS6KA5O75582 802 aa14.02□□□□□ -0.17
PCDHB4-201ENST00000194152 GABPAQ06546 454 aa14.02□□□□□ -0.17
PCDHB4-201ENST00000194152 SWSAP1Q6NVH7 229 aa14.02□□□□□ -0.17
PCDHB4-201ENST00000194152 MRRFQ96E11 262 aaKnown RBP14.02□□□□□ -0.17
PCDHB4-201ENST00000194152 PKD1L3Q7Z443 1732 aa14.02□□□□□ -0.17
PCDHB4-201ENST00000194152 MEIS2O14770 477 aa14.02□□□□□ -0.17
PCDHB4-201ENST00000194152 NEFHP12036 1026 aa14.02□□□□□ -0.17
PCDHB4-201ENST00000194152 HMGB2P26583 209 aaKnown RBP14.02□□□□□ -0.17
PCDHB4-201ENST00000194152 TUBB4BP68371 445 aa14.02□□□□□ -0.17
PCDHB4-201ENST00000194152 GUCY2DQ02846 1103 aa14.02□□□□□ -0.17
PCDHB4-201ENST00000194152 CPLX4Q7Z7G2 160 aa14.02□□□□□ -0.17
PCDHB4-201ENST00000194152 GUF1Q8N442 669 aaKnown RBP14.02□□□□□ -0.17
PCDHB4-201ENST00000194152 MSANTD4Q8NCY6 345 aa14.02□□□□□ -0.17
PCDHB4-201ENST00000194152 KRT14P02533 472 aa14.01□□□□□ -0.17
PCDHB4-201ENST00000194152 RPS6KA1Q15418 735 aa14.01□□□□□ -0.17
PCDHB4-201ENST00000194152 ZBTB33Q86T24 672 aa14.01□□□□□ -0.17
PCDHB4-201ENST00000194152 PACSIN1Q9BY11 444 aa14.01□□□□□ -0.17
PCDHB4-201ENST00000194152 UBE2TQ9NPD8 197 aaPredicted RBP14.01□□□□□ -0.17
PCDHB4-201ENST00000194152 AFPP02771 609 aaKnown RBP14.01□□□□□ -0.17
PCDHB4-201ENST00000194152 STAT1P42224 750 aa14.01□□□□□ -0.17
PCDHB4-201ENST00000194152 MYO1EQ12965 1108 aa14.01□□□□□ -0.17
PCDHB4-201ENST00000194152 NNTQ13423 1086 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms