RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 VPS54Q9P1Q0 977 aa17.96■□□□□ 0.47
ERCC1-201ENST00000013807 GABBR1Q9UBS5 961 aa17.96■□□□□ 0.47
ERCC1-201ENST00000013807 TCEAL9Q9UHQ7 104 aa17.96■□□□□ 0.47
ERCC1-201ENST00000013807 PCDHB7Q9Y5E2 793 aa17.96■□□□□ 0.47
ERCC1-201ENST00000013807 DNAJB1P25685 340 aa17.95■□□□□ 0.46
ERCC1-201ENST00000013807 CCT2P78371 535 aaKnown RBP17.95■□□□□ 0.46
ERCC1-201ENST00000013807 UBE3AQ05086 875 aa17.95■□□□□ 0.46
ERCC1-201ENST00000013807 SMAD2Q15796 467 aaKnown RBP17.95■□□□□ 0.46
ERCC1-201ENST00000013807 KIZQ2M2Z5 673 aa17.95■□□□□ 0.46
ERCC1-201ENST00000013807 GALNT17Q6IS24 598 aa17.95■□□□□ 0.46
ERCC1-201ENST00000013807 MOXD1Q6UVY6 613 aa17.95■□□□□ 0.46
ERCC1-201ENST00000013807 FAM228AQ86W67 206 aa17.95■□□□□ 0.46
ERCC1-201ENST00000013807 KLHL23Q8NBE8 558 aa17.95■□□□□ 0.46
ERCC1-201ENST00000013807 DAGLBQ8NCG7 672 aa17.95■□□□□ 0.46
ERCC1-201ENST00000013807 RDM1Q8NG50 284 aa17.95■□□□□ 0.46
ERCC1-201ENST00000013807 MBOAT7Q96N66 472 aa17.95■□□□□ 0.46
ERCC1-201ENST00000013807 NCOA5Q9HCD5 579 aaKnown RBP17.95■□□□□ 0.46
ERCC1-201ENST00000013807 NRBP2Q9NSY0 501 aa17.95■□□□□ 0.46
ERCC1-201ENST00000013807 TMEM161AQ9NX61 479 aa17.95■□□□□ 0.46
ERCC1-201ENST00000013807 LRFN2Q9ULH4 789 aa17.95■□□□□ 0.46
ERCC1-201ENST00000013807 CYP46A1Q9Y6A2 500 aa17.95■□□□□ 0.46
ERCC1-201ENST00000013807 DENND3A2RUS2 1198 aa17.94■□□□□ 0.46
ERCC1-201ENST00000013807 PSMD10O75832 226 aa17.94■□□□□ 0.46
ERCC1-201ENST00000013807 JAK3P52333 1124 aa17.94■□□□□ 0.46
ERCC1-201ENST00000013807 ZP2Q05996 745 aa17.94■□□□□ 0.46
ERCC1-201ENST00000013807 DLX2Q07687 328 aaPredicted RBP17.94■□□□□ 0.46
ERCC1-201ENST00000013807 SSRP1Q08945 709 aaKnown RBP17.94■□□□□ 0.46
ERCC1-201ENST00000013807 TARBP2Q15633 366 aaKnown RBP17.94■□□□□ 0.46
ERCC1-201ENST00000013807 NPY5RQ15761 445 aa17.94■□□□□ 0.46
ERCC1-201ENST00000013807 TRIM22Q8IYM9 498 aa17.94■□□□□ 0.46
ERCC1-201ENST00000013807 PPP2R3CQ969Q6 453 aa17.94■□□□□ 0.46
ERCC1-201ENST00000013807 OSMRQ99650 979 aa17.94■□□□□ 0.46
ERCC1-201ENST00000013807 ADAMTS10Q9H324 1103 aa17.94■□□□□ 0.46
ERCC1-201ENST00000013807 PCDHA4Q9UN74 947 aa17.94■□□□□ 0.46
ERCC1-201ENST00000013807 GINS2Q9Y248 185 aa17.94■□□□□ 0.46
ERCC1-201ENST00000013807 DEXIO95424 95 aa17.93■□□□□ 0.46
ERCC1-201ENST00000013807 OATP04181 439 aa17.93■□□□□ 0.46
ERCC1-201ENST00000013807 ALADP13716 330 aa17.93■□□□□ 0.46
ERCC1-201ENST00000013807 EIF4BP23588 611 aaKnown RBP17.93■□□□□ 0.46
ERCC1-201ENST00000013807 TMOD1P28289 359 aa17.93■□□□□ 0.46
ERCC1-201ENST00000013807 NLRP5P59047 1200 aa17.93■□□□□ 0.46
ERCC1-201ENST00000013807 CSPP1Q1MSJ5 1256 aa17.93■□□□□ 0.46
ERCC1-201ENST00000013807 EFCAB12Q6NXP0 572 aa17.93■□□□□ 0.46
ERCC1-201ENST00000013807 ADHFE1Q8IWW8 467 aa17.93■□□□□ 0.46
ERCC1-201ENST00000013807 METTL13Q8N6R0 699 aa17.93■□□□□ 0.46
ERCC1-201ENST00000013807 TBCKQ8TEA7 893 aa17.93■□□□□ 0.46
ERCC1-201ENST00000013807 MSLNLQ96KJ4 702 aa17.93■□□□□ 0.46
ERCC1-201ENST00000013807 UIMC1Q96RL1 719 aa17.93■□□□□ 0.46
ERCC1-201ENST00000013807 NIFKQ9BYG3 293 aaKnown RBP17.93■□□□□ 0.46
ERCC1-201ENST00000013807 RAPGEFL1Q9UHV5 662 aa17.93■□□□□ 0.46
ERCC1-201ENST00000013807 SAMM50Q9Y512 469 aa17.93■□□□□ 0.46
ERCC1-201ENST00000013807 MBTPS2O43462 519 aa17.92■□□□□ 0.46
ERCC1-201ENST00000013807 GAS7O60861 476 aa17.92■□□□□ 0.46
ERCC1-201ENST00000013807 PPFIA3O75145 1194 aa17.92■□□□□ 0.46
ERCC1-201ENST00000013807 TBX10O75333 385 aa17.92■□□□□ 0.46
ERCC1-201ENST00000013807 EYA4O95677 639 aa17.92■□□□□ 0.46
ERCC1-201ENST00000013807 VTNP04004 478 aa17.92■□□□□ 0.46
ERCC1-201ENST00000013807 GATMP50440 423 aa17.92■□□□□ 0.46
ERCC1-201ENST00000013807 NLRP11P59045 1033 aaKnown RBP17.92■□□□□ 0.46
ERCC1-201ENST00000013807 PAN2Q504Q3 1202 aaKnown RBP17.92■□□□□ 0.46
ERCC1-201ENST00000013807 FAM102BQ5T8I3 360 aa17.92■□□□□ 0.46
ERCC1-201ENST00000013807 LRCH2Q5VUJ6 765 aa17.92■□□□□ 0.46
ERCC1-201ENST00000013807 EFHBQ8N7U6 833 aa17.92■□□□□ 0.46
ERCC1-201ENST00000013807 POF1BQ8WVV4 589 aa17.92■□□□□ 0.46
ERCC1-201ENST00000013807 CEP89Q96ST8 783 aa17.92■□□□□ 0.46
ERCC1-201ENST00000013807 TEKT3Q9BXF9 490 aa17.92■□□□□ 0.46
ERCC1-201ENST00000013807 AAASQ9NRG9 546 aa17.92■□□□□ 0.46
ERCC1-201ENST00000013807 PCDHB12Q9Y5F1 795 aa17.92■□□□□ 0.46
ERCC1-201ENST00000013807 MUC6Q6W4X9 2439 aa17.92■□□□□ 0.46
ERCC1-201ENST00000013807 IGKV6-21A0A0C4DH24 114 aa17.91■□□□□ 0.46
ERCC1-201ENST00000013807 STBD1O95210 358 aa17.91■□□□□ 0.46
ERCC1-201ENST00000013807 GTF2F1P35269 517 aaKnown RBP eCLIP17.91■□□□□ 0.468e-9■■■■■ 31.3
ERCC1-201ENST00000013807 IRS1P35568 1242 aa17.91■□□□□ 0.46
ERCC1-201ENST00000013807 CLCN3P51790 818 aa17.91■□□□□ 0.46
ERCC1-201ENST00000013807 CDC42EP1Q00587 391 aa17.91■□□□□ 0.46
ERCC1-201ENST00000013807 PRKCEQ02156 737 aa17.91■□□□□ 0.46
ERCC1-201ENST00000013807 SMAD4Q13485 552 aaKnown RBP17.91■□□□□ 0.46
ERCC1-201ENST00000013807 PDE12Q6L8Q7 609 aaKnown RBP17.91■□□□□ 0.46
ERCC1-201ENST00000013807 BLIDQ8IZY5 108 aa17.91■□□□□ 0.46
ERCC1-201ENST00000013807 MAP7D2Q96T17 732 aa17.91■□□□□ 0.46
ERCC1-201ENST00000013807 UNC45AQ9H3U1 944 aa17.91■□□□□ 0.46
ERCC1-201ENST00000013807 CWH43Q9H720 699 aa17.91■□□□□ 0.46
ERCC1-201ENST00000013807 LZTS1Q9Y250 596 aa17.91■□□□□ 0.46
ERCC1-201ENST00000013807 ZNF318Q5VUA4 2279 aa17.9■□□□□ 0.46
ERCC1-201ENST00000013807 PRR33A8MZF0 331 aa17.9■□□□□ 0.46
ERCC1-201ENST00000013807 SSTR3P32745 418 aaPredicted RBP17.9■□□□□ 0.46
ERCC1-201ENST00000013807 PLA2G5P39877 138 aa17.9■□□□□ 0.46
ERCC1-201ENST00000013807 GPC3P51654 580 aa17.9■□□□□ 0.46
ERCC1-201ENST00000013807 COASYQ13057 564 aa17.9■□□□□ 0.46
ERCC1-201ENST00000013807 UGCGQ16739 394 aa17.9■□□□□ 0.46
ERCC1-201ENST00000013807 CPLX2Q6PUV4 134 aaKnown RBP17.9■□□□□ 0.46
ERCC1-201ENST00000013807 ETNPPLQ8TBG4 499 aa17.9■□□□□ 0.46
ERCC1-201ENST00000013807 ATP6V0A4Q9HBG4 840 aa17.9■□□□□ 0.46
ERCC1-201ENST00000013807 TYW1Q9NV66 732 aaKnown RBP17.9■□□□□ 0.46
ERCC1-201ENST00000013807 CLEC1BQ9P126 229 aa17.9■□□□□ 0.46
ERCC1-201ENST00000013807 CD207Q9UJ71 328 aa17.9■□□□□ 0.46
ERCC1-201ENST00000013807 AKT3Q9Y243 479 aa17.9■□□□□ 0.46
ERCC1-201ENST00000013807 PIEZO1Q92508 2521 aa17.89■□□□□ 0.45
ERCC1-201ENST00000013807 FSD2A1L4K1 749 aa17.89■□□□□ 0.45
ERCC1-201ENST00000013807 TBKBP1A7MCY6 615 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms