RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Ugt1a6bK9J7B2 531 aa11.85□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Kif5aP33175 1027 aa11.85□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Ptk2P34152 1090 aa11.85□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Lrig2Q52KR2 1054 aa11.85□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Ugt1a6Q64435 531 aa11.85□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Ugt1a7cQ6ZQM8 531 aa11.85□□□□□ -0.51
Scn8a-203ENSMUST00000108908 CerkQ8K4Q7 531 aa11.85□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Q91WD4 421 aa11.85□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Tnrc6bQ8BKI2 1810 aaKnown RBP11.85□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Ccdc194A0A140LIT1 234 aa11.85□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Adgrf5G5E8Q8 1348 aa11.85□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Acot5Q6Q2Z6 421 aa11.85□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Ece2Q80Z60 881 aa11.85□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Efcab14Q8BGQ6 484 aa11.85□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Olfr1494Q8VGP8 315 aa11.85□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Pabpc6Q9D4E6 643 aaKnown RBP11.85□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Usp21Q9QZL6 566 aa11.85□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Pabpc1lA2A5N3 607 aaKnown RBP11.85□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Lekr1B2RVN1 116 aa11.85□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Ext2P70428 718 aa11.85□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Ctdnep1Q3TP92 244 aa11.85□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Sytl1Q99N80 567 aa11.85□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Tmed8Q3UHI4 326 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Pla2g4eQ50L42 875 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Vav2Q60992 868 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Scfd2Q8BTY8 684 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Cep95Q8BVV7 827 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Tmem60Q8K174 133 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Trex1Q91XB0 314 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 GrapQ9CX99 217 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Eif4enif1Q9EST3 983 aaKnown RBP11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Gm45261A0A1B0GSP6 197 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Krt10P02535 570 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Micall2Q3TN34 1009 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Foxred2Q3USW5 665 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Ttf2Q5NC05 1138 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Kiaa0391Q8JZY4 584 aaKnown RBP11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Thoc1Q8R3N6 657 aaKnown RBP11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Ccdc65Q8VHI7 493 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Drap1Q9D6N5 205 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Large1Q9Z1M7 756 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Sik3Q6P4S6 1311 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Cst8P32766 142 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Adamts18Q4VC17 1219 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Slc35f6Q8VE96 372 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Rbp7Q9EPC5 134 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Ggps1Q9WTN0 300 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Arhgap6O54834 987 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Il2P04351 169 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Trim43aQ3TL54 445 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Llgl1Q80Y17 1036 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Map10Q8BJS7 891 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Ephb1Q8CBF3 984 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Stard7Q8R1R3 373 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Alas1Q8VC19 642 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Mtmr1Q9Z2C4 669 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Gm3127E9Q9P5 263 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Gm3453K7N724 263 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 D1Pas1P16381 660 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Chrna5Q2MKA5 467 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 MtbpQ8BJS8 894 aaKnown RBP11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Pard3bQ9CSB4 1203 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Mcf2A2AEU1 1111 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 JrklB2RRL2 523 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Zdhhc9P59268 364 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Q3KNL4 93 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Ccdc84Q4VA36 332 aaKnown RBP11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 TbckQ8BM85 762 aa11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Eif3cQ8R1B4 911 aaKnown RBP11.84□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Rnf123Q5XPI3 1314 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Dsg3O35902 993 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 IkbkbO88351 757 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Ms4a5Q810P8 197 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Ubxn10Q8BG34 277 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Zcchc18Q8VD24 393 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Ophn1Q99J31 802 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 HnrnpcQ9Z204 313 aaKnown RBP11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Cep85lA0A1W2P884 806 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Vmn2r71L7N2D8 855 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Sema4dO09126 861 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Trim72Q1XH17 477 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Cog7Q3UM29 770 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 PrcpQ7TMR0 491 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 YwhabQ9CQV8 246 aaKnown RBP11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Trim42Q9D2H5 723 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Ttc37F8VPK0 1563 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Gm8994E9PV04 411 aaKnown RBP11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Exosc10P56960 887 aaKnown RBP11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Mcl1P97287 331 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Adgrg6Q6F3F9 1165 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Ccdc154Q6RUT8 657 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 AmphQ7TQF7 686 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Mtrf1lQ8BJU9 373 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Rfx6Q8C7R7 927 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Prpf31Q8CCF0 499 aaKnown RBP11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Slc4a1P04919 929 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Fkbp1aP26883 108 aaKnown RBP11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Alx1Q8C8B0 326 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 C8aQ8K182 587 aa11.83□□□□□ -0.52
Scn8a-203ENSMUST00000108908 3830403N18RikQ9D6C3 208 aa11.83□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms