RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Rfc2Q9WUK4 349 aaKnown RBP13.57□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Ttll6A4Q9E8 822 aa13.56□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Xpnpep3B7ZMP1 506 aaKnown RBP13.56□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 SprtnG3X912 497 aa13.56□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Atp2b1G5E829 1220 aa13.56□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Ampd3O08739 766 aa13.56□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Mpzl3Q3V3F6 237 aa13.56□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Pnma5Q5DTT8 618 aa13.56□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 ScapQ6GQT6 1276 aa13.56□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 ChpfQ6IQX7 774 aa13.56□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Drc7Q6V3W6 876 aa13.56□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Hook2Q7TMK6 716 aa13.56□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Sestd1Q80UK0 696 aa13.56□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Mrgprx1Q8CIP3 322 aa13.56□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Tdrd7Q8K1H1 1086 aaKnown RBP13.56□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Sbk1Q8QZX0 417 aa13.56□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Stxbp4Q9WV89 557 aa13.56□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Arih2Q9Z1K6 492 aa13.56□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Plxna1P70206 1894 aa13.56□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Igkv18-36A0A075B5M9 114 aa13.55□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Man1b1A2AJ15 658 aa13.55□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Vmn2r17E9PYF5 849 aa13.55□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Tnfaip1O70479 316 aa13.55□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Chrna1P04756 457 aa13.55□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 FosbP13346 338 aa13.55□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Ifnar1P33896 590 aa13.55□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 RabggtbP53612 339 aa13.55□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Mfhas1Q3V1N1 1048 aa13.55□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Vps72Q62481 368 aa13.55□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Acot5Q6Q2Z6 421 aa13.55□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Sh3tc2Q80VA5 1289 aa13.55□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Tnpo1Q8BFY9 898 aaKnown RBP13.55□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Zmynd15Q8C0R7 736 aa13.55□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Colgalt1Q8K297 617 aa13.55□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 OtoaQ8K561 1137 aa13.55□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Olfr395Q8VGR3 312 aa13.55□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Rnf186Q9D241 226 aa13.55□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Calml3Q9D6P8 149 aa13.55□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Mgea5Q9EQQ9 916 aa13.55□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Ktn1Q61595 1327 aaKnown RBP13.55□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Myh11O08638 1972 aa13.54□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Sptbn5F6UCX4 1208 aa13.54□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 GclmO09172 274 aaKnown RBP13.54□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Lamp2P17047 415 aa13.54□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 SarsP26638 512 aaKnown RBP13.54□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Dnm2P39054 870 aaKnown RBP13.54□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Gfpt1P47856 697 aa13.54□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Oas1fQ14AZ4 364 aa13.54□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Kmt5aQ2YDW7 349 aa13.54□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Slc2a13Q3UHK1 637 aa13.54□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Npas4Q8BGD7 802 aa13.54□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Zmym6Q8BS54 1249 aa13.54□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Vwa1Q8R2Z5 415 aa13.54□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Trub2Q91WG3 331 aaKnown RBP13.54□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 GhdcQ99J23 532 aa13.54□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Emc2Q9CRD2 297 aa13.54□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Snrnp35Q9D384 244 aa13.54□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Lrrc46Q9DAP0 323 aa13.54□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Arl6ip4Q9JM93 229 aa13.54□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Phtf1Q9QZ09 761 aa13.54□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Unc80Q8BLN6 3261 aa13.54□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Zfp882E9Q4R4 555 aa13.53□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Rgs2O08849 211 aa13.53□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Rnaseh1O70338 285 aa13.53□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 PparaP23204 468 aa13.53□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Cyp17a1P27786 507 aa13.53□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Mmp3P28862 477 aa13.53□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Rasa2P58069 847 aa13.53□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Ano7Q14AT5 859 aa13.53□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Rsph3aQ3UFY4 516 aa13.53□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Adamts18Q4VC17 1219 aa13.53□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 P4ha1Q60715 534 aa13.53□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Ccna1Q61456 421 aa13.53□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Smarca1Q6PGB8 1046 aa13.53□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Dalrd3Q6PJN8 538 aa13.53□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Cd300aQ6SJQ0 318 aa13.53□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Susd6Q8BGE4 302 aa13.53□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Btnl9Q8BJE2 536 aa13.53□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Slc38a7Q8BWH0 463 aa13.53□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Mettl24Q8CCB5 363 aa13.53□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Trim29Q8R2Q0 587 aa13.53□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Hexim1Q8R409 356 aaKnown RBP13.53□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Micu3Q9CTY5 523 aa13.53□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Capns2Q9D7J7 247 aa13.53□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Rsph3bQ9DA80 389 aa13.53□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Col4a3bpQ9EQG9 624 aa13.53□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Ddx21Q9JIK5 851 aaKnown RBP13.53□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Cabp5Q9JLK3 173 aa13.53□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Hic2Q9JLZ6 619 aaKnown RBP13.53□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Myo7aP97479 2215 aa13.52□□□□□ -0.24
Ccdc28a-202ENSMUST00000080860 Map7d2A2AG50 781 aa13.52□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Trim30bE9PVL6 203 aa13.52□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 PtenO08586 403 aa13.52□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Axin2O88566 840 aa13.52□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Rplp2P99027 115 aaKnown RBP13.52□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Mark2Q05512 776 aa13.52□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Mier3Q3UHF3 551 aa13.52□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Gm28047Q3US59 414 aa13.52□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Scarf1Q5ND28 820 aa13.52□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Leo1Q5XJE5 667 aa13.52□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms