RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Cyp4f39Q8BGU0 532 aa25.11■■□□□ 1.61
Upf3a-201ENSMUST00000043767 NkrfQ8BY02 690 aaKnown RBP25.11■■□□□ 1.61
Upf3a-201ENSMUST00000043767 Rassf4Q8CB96 322 aa25.11■■□□□ 1.61
Upf3a-201ENSMUST00000043767 Tas1r3Q925D8 858 aa25.11■■□□□ 1.61
Upf3a-201ENSMUST00000043767 Cyp2s1Q9DBX6 501 aa25.11■■□□□ 1.61
Upf3a-201ENSMUST00000043767 Copb1Q9JIF7 953 aa25.11■■□□□ 1.61
Upf3a-201ENSMUST00000043767 RptorQ8K4Q0 1335 aa25.11■■□□□ 1.61
Upf3a-201ENSMUST00000043767 Specc1lQ2KN98 1118 aaKnown RBP25.1■■□□□ 1.61
Upf3a-201ENSMUST00000043767 Etaa1Q5SVT3 877 aa25.1■■□□□ 1.61
Upf3a-201ENSMUST00000043767 Xpnpep1Q6P1B1 623 aa25.1■■□□□ 1.61
Upf3a-201ENSMUST00000043767 GanQ8CA72 597 aa25.1■■□□□ 1.61
Upf3a-201ENSMUST00000043767 Ano2Q8CFW1 1002 aa25.1■■□□□ 1.61
Upf3a-201ENSMUST00000043767 NptxrQ99J85 493 aa25.1■■□□□ 1.61
Upf3a-201ENSMUST00000043767 Sox5P35710 763 aa25.09■■□□□ 1.61
Upf3a-201ENSMUST00000043767 Tsg101Q61187 391 aa25.09■■□□□ 1.61
Upf3a-201ENSMUST00000043767 Dhx37Q6NZL1 1150 aa25.09■■□□□ 1.61
Upf3a-201ENSMUST00000043767 Cep95Q8BVV7 827 aa25.09■■□□□ 1.61
Upf3a-201ENSMUST00000043767 Eif4e3Q9DBB5 207 aa25.09■■□□□ 1.61
Upf3a-201ENSMUST00000043767 Abcb6Q9DC29 842 aa25.09■■□□□ 1.61
Upf3a-201ENSMUST00000043767 Serpinb6bO08804 377 aa25.09■■□□□ 1.61
Upf3a-201ENSMUST00000043767 Map1sQ8C052 973 aa25.09■■□□□ 1.61
Upf3a-201ENSMUST00000043767 Hdhd5Q91WM2 419 aa25.09■■□□□ 1.61
Upf3a-201ENSMUST00000043767 Kif17Q99PW8 1038 aa25.09■■□□□ 1.61
Upf3a-201ENSMUST00000043767 Snx29Q9D3S3 818 aa25.09■■□□□ 1.61
Upf3a-201ENSMUST00000043767 Tff2Q03404 129 aa25.08■■□□□ 1.61
Upf3a-201ENSMUST00000043767 Kmt5aQ2YDW7 349 aa25.08■■□□□ 1.61
Upf3a-201ENSMUST00000043767 Znf784Q8BI69 297 aa25.08■■□□□ 1.61
Upf3a-201ENSMUST00000043767 Tada3Q8R0L9 432 aa25.08■■□□□ 1.61
Upf3a-201ENSMUST00000043767 Atp2a1Q8R429 994 aa25.08■■□□□ 1.61
Upf3a-201ENSMUST00000043767 Pls3Q99K51 630 aa25.08■■□□□ 1.61
Upf3a-201ENSMUST00000043767 AmfrQ9R049 643 aa25.08■■□□□ 1.61
Upf3a-201ENSMUST00000043767 Mtmr1Q9Z2C4 669 aa25.08■■□□□ 1.61
Upf3a-201ENSMUST00000043767 Gm42688A0A0R3P9D1 673 aa25.08■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Gm7086A0A1W2P766 342 aa25.08■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Magea4F2Z493 315 aa25.08■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Mdm4O35618 489 aa25.08■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Uri1Q3TLD5 531 aa25.08■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Cyp4f37Q3V1F1 546 aa25.08■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Nab2Q61127 525 aa25.08■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Ccdc142Q8CAI1 738 aa25.08■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Rpn1Q91YQ5 608 aaKnown RBP25.08■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Snx10Q9CWT3 201 aa25.08■■□□□ 1.6
Upf3a-201ENSMUST00000043767 SelenooQ9DBC0 667 aa25.08■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Zranb2Q9R020 330 aaKnown RBP25.08■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Ccdc191J3QQ27 883 aa25.07■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Serpinb8O08800 374 aaKnown RBP25.07■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Sh3bp1P55194 680 aa25.07■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Igbp1Q61249 340 aa25.07■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Tpm4Q6IRU2 248 aa25.07■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Ppp2r2cQ8BG02 447 aa25.07■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Armcx3Q8BHS6 379 aa25.07■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Bbs7Q8K2G4 715 aa25.07■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Exoc4O35382 975 aa25.06■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Mcm5P49718 733 aa25.06■■□□□ 1.6
Upf3a-201ENSMUST00000043767 TbataQ7TSD4 393 aa25.06■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Bmp3Q8BHE5 468 aa25.06■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Pnpla2Q8BJ56 486 aa25.06■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Vps18Q8R307 973 aa25.06■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Gnl2Q99LH1 728 aaKnown RBP25.06■■□□□ 1.6
Upf3a-201ENSMUST00000043767 PolkQ9QUG2 852 aa25.06■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Eif3dO70194 548 aaKnown RBP25.06■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Bag1Q60739 355 aa25.06■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Plppr4Q7TME0 766 aa25.06■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Ttc38A3KMP2 465 aa25.05■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Hoxc6P10629 235 aa25.05■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Nr2f2P43135 414 aa25.05■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Zfp90Q61967 636 aa25.05■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Znf532Q6NXK2 1036 aa25.05■■□□□ 1.6
Upf3a-201ENSMUST00000043767 MafaQ8CF90 359 aa25.05■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Emc2Q9CRD2 297 aa25.05■■□□□ 1.6
Upf3a-201ENSMUST00000043767 DexiQ9WUQ7 95 aa25.05■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Knop1Q9Z2Q2 478 aaKnown RBP25.05■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Nfx1B1AY10 1114 aaKnown RBP25.05■■□□□ 1.6
Upf3a-201ENSMUST00000043767 NfkbieO54910 364 aa25.05■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Acsl1P41216 699 aa25.05■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Pbx1P41778 430 aa25.05■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Sema5bQ60519 1093 aa25.05■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Mtmr10Q7TPM9 771 aa25.05■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Pank4Q80YV4 820 aa25.05■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Galnt15Q9D2N8 638 aa25.05■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Gm44511A0A0N4SW10 223 aa25.04■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Etnk2A7MCT6 385 aa25.04■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Klrb1bP27812 223 aa25.04■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Irs1P35569 1233 aa25.04■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Pdrg1P59048 133 aa25.04■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Hmgb1P63158 215 aaKnown RBP25.04■■□□□ 1.6
Upf3a-201ENSMUST00000043767 EregQ61521 162 aa25.04■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Fam214aQ69ZK7 1075 aa25.04■■□□□ 1.6
Upf3a-201ENSMUST00000043767 E2f7Q6S7F2 904 aa25.04■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Chtf18Q8BIW9 969 aa25.04■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Rab11fip4Q8BQP8 635 aa25.04■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Tspan8Q8R3G9 235 aa25.04■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Klhl10Q9D5V2 608 aa25.04■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Ttll10A4Q9F3 704 aa25.03■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Pdzrn4E9PUZ9 1014 aa25.03■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Drp2Q05AA6 957 aa25.03■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Gucy2cQ3UWA6 1072 aa25.03■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Maats1Q8BRC6 783 aa25.03■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Slc9b1Q8C0X2 565 aa25.03■■□□□ 1.6
Upf3a-201ENSMUST00000043767 Cd209bQ8CJ91 325 aa25.03■■□□□ 1.6
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms