RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 EsrrgP62509 458 aa9.41□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Tpd52Q62393 224 aa9.41□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Cdc23Q8BGZ4 597 aa9.41□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Pcdhgb4Q91XX6 912 aa9.41□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Utp11Q9CZJ1 253 aaKnown RBP9.41□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Psmg1Q9JK23 289 aa9.41□□□□□ -0.9
Ttc28-201ENSMUST00000040111 L1camP11627 1260 aa9.41□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Gad1P48318 593 aa9.41□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Rnf19aP50636 840 aa9.41□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Peg10Q7TN75 958 aaKnown RBP9.41□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Pdia6Q922R8 440 aaKnown RBP9.41□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Cmtr1Q9DBC3 837 aa9.41□□□□□ -0.9
Ttc28-201ENSMUST00000040111 CoblQ5NBX1 1337 aaKnown RBP9.41□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Cul4bA2A432 970 aaKnown RBP9.41□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Gucy2cQ3UWA6 1072 aa9.41□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Supt20hQ7TT00 530 aaKnown RBP9.41□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Lrrc8cQ8R502 803 aa9.41□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Rnf112Q96DY5 654 aa9.41□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Tlr9Q9EQU3 1032 aa9.41□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Ighv11-2A0A075B5R8 117 aa9.41□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Tex13cD3YU32 604 aa9.41□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Ulk3Q3U3Q1 472 aa9.41□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Atxn7l3bQ3UD01 97 aa9.41□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Fbxl5Q8C2S5 690 aa9.41□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Cabcoco1Q8CDT7 208 aa9.41□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Pop1Q8K205 1045 aa9.41□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Ppp1r14cQ8R4S0 164 aa9.41□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Rhobtb2Q91V93 728 aa9.41□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Polr3cQ9D483 533 aa9.41□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Mrps9Q9D7N3 390 aaKnown RBP9.41□□□□□ -0.9
Ttc28-201ENSMUST00000040111 B3galt4Q9Z0F0 371 aa9.41□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Dip2cE9PWR4 1557 aa9.41□□□□□ -0.9
Ttc28-201ENSMUST00000040111 XlrP05531 208 aa9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Pdha1P35486 390 aaKnown RBP9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Foxred2Q3USW5 665 aa9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Atxn2lQ7TQH0 1049 aaKnown RBP9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 TbataQ7TSD4 393 aa9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Cyp2d9P11714 504 aa9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 OsbpQ3B7Z2 805 aa9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Antxr2Q6DFX2 487 aa9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Ckap2lQ7TS74 745 aa9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Olfr1494Q8VGP8 315 aa9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Diaph3Q9Z207 1171 aa9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Ncoa7Q6DFV7 943 aa9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Fbxo41Q6NS60 873 aa9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Rhobtb1Q9DAK3 695 aa9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Map3k15A2AQW0 1331 aa9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Znf638Q61464 1960 aaKnown RBP9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 4932429P05RikA2ADI4 785 aa9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Gucy2eP52785 1108 aa9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Irx1P81068 480 aa9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Sval3Q76I99 144 aa9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Scfd1Q8BRF7 639 aaKnown RBP9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Myef2Q8C854 591 aaKnown RBP9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Ttc33Q9D6K7 262 aa9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Zfyve16Q80U44 1528 aa9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Lins1Q3U1D0 764 aa9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Miga1Q4QQM5 600 aa9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Pnma5Q5DTT8 618 aa9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Strip2Q8C9H6 844 aa9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Trim42Q9D2H5 723 aa9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Tspan3Q9QY33 253 aa9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Gm6121L7MUF1 212 aa9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Nim1kQ8BHI9 436 aa9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Dbndd2Q9CRD4 158 aa9.4□□□□□ -0.9
Ttc28-201ENSMUST00000040111 Myh3P13541 1940 aa9.4□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Cdo1P60334 200 aa9.4□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Caprin1Q60865 707 aaKnown RBP9.4□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Mrps22Q9CXW2 359 aa9.4□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Taf1dQ9D4V4 322 aa9.4□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Nme3Q9WV85 169 aa9.4□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Soat2O88908 525 aa9.4□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Lig1P37913 916 aa9.4□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Tsr1Q5SWD9 803 aa9.4□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Churc1Q6DG52 112 aa9.4□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Dcaf15Q6PFH3 600 aa9.4□□□□□ -0.91
Ttc28-201ENSMUST00000040111 EngaseQ8BX80 734 aa9.4□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Rcor2Q8C796 523 aa9.4□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Ccdc17Q8CE13 565 aa9.4□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Dip2aQ8BWT5 1523 aa9.4□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Cyp3a25O09158 503 aa9.4□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Lrch2Q3UMG5 773 aa9.4□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Hipk4Q3V016 616 aa9.4□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Myo19Q5SV80 963 aa9.4□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Tmtc4Q8BG19 741 aa9.4□□□□□ -0.91
Ttc28-201ENSMUST00000040111 E330017A01RikQ8BU47 192 aa9.4□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Smad9Q9JIW5 430 aa9.4□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Gm14525B1AZA0 212 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Gm2012B1B0R1 212 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Rbp3P49194 1234 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 PltpP55065 493 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Q6GQV0 436 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Usp8Q80U87 1080 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Cep95Q8BVV7 827 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Tspyl4Q8VD63 406 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 1700109H08RikQ9D9C0 210 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Clcn6O35454 870 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Acap2Q6ZQK5 770 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Etnk1Q9D4V0 363 aa9.39□□□□□ -0.91
Ttc28-201ENSMUST00000040111 Trpc7Q9WVC5 862 aa9.39□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 39.8 ms