RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Hif1aQ61221 836 aaKnown RBP24.69■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Cog4Q8R1U1 785 aa24.69■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Ddx39aQ8VDW0 427 aaKnown RBP24.69■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Zswim7Q9CWQ2 152 aa24.69■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Ppp1r12aQ9DBR7 1029 aaKnown RBP24.69■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Anxa9Q9JHQ0 345 aa24.69■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Dcaf5Q80T85 946 aa24.68■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Cul3Q9JLV5 768 aa24.68■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Hic1Q9R1Y5 733 aa24.68■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Grin2dQ03391 1323 aa24.68■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Wdr19Q3UGF1 1341 aa24.68■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Pacsin1Q61644 441 aa24.68■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Letm2Q7TNU7 480 aa24.68■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Slain2Q8CI08 581 aa24.68■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Ttc38A3KMP2 465 aa24.68■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Apol11bE9PUZ0 337 aa24.68■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 PpargP37238 505 aa24.68■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Vps4bP46467 444 aaKnown RBP24.68■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Trip10Q8CJ53 603 aa24.68■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Morc2bQ8C5W4 1022 aa24.68■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Thumpd2Q9CZB3 528 aa24.68■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Pbrm1Q8BSQ9 1634 aaKnown RBP24.67■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Gm11985A0A1B0GS61 206 aa24.67■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Gimd1E9PW74 217 aa24.67■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Dynll1P63168 89 aa24.67■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Adamts18Q4VC17 1219 aa24.67■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Zbtb8osQ505B7 168 aa24.67■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Bpifb6Q8BU51 449 aa24.67■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 CenpuQ8C4M7 410 aa24.67■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Pde10aQ8CA95 790 aa24.67■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Kif1bQ60575 1816 aaKnown RBP24.67■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Pabpc1lA2A5N3 607 aaKnown RBP24.67■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Rgs22G3UYX5 1258 aa24.67■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Lig1P37913 916 aa24.67■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Nlrp4eQ66X19 978 aa24.67■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Mb21d2Q8C525 428 aa24.67■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Uba6Q8C7R4 1053 aa24.67■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Raph1F2Z3U3 1266 aa24.67■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Serpinb6dQ3UWK8 375 aa24.67■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Znf12Q7TSI0 686 aa24.67■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Abcg3Q99P81 650 aa24.67■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Fip1l1Q9D824 581 aaKnown RBP24.67■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 1700016D06RikQ9DAA5 166 aa24.67■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 PorP37040 678 aa24.67■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Lzts1P60853 599 aa24.67■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Ece1Q4PZA2 769 aa24.67■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 PreplQ8C167 725 aa24.67■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Nudcd3Q8R1N4 363 aa24.67■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Thoc1Q8R3N6 657 aaKnown RBP24.67■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Eno3P21550 434 aa24.66■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Sec31aQ3UPL0 1230 aaKnown RBP24.66■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Islr2Q5RKR3 745 aa24.66■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Vil1Q62468 827 aa24.66■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Trpv6Q91WD2 767 aa24.66■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Q91WD4 421 aa24.66■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Zfp651E9PZ11 729 aa24.66■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Slc39a2G3X943 309 aa24.66■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Slc1a1P51906 523 aa24.66■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Ifnl2Q4VK74 193 aa24.66■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Tsta3P23591 321 aa24.66■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Xxylt1Q3U4G3 392 aa24.66■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Afap1l2Q5DTU0 825 aa24.66■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Fam84aQ9D650 292 aa24.66■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Gm3127E9Q9P5 263 aa24.66■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Gm3453K7N724 263 aa24.66■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Alkbh8Q80Y20 664 aa24.66■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Strip2Q8C9H6 844 aa24.66■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 FtcdQ91XD4 541 aa24.66■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Trim59Q922Y2 403 aa24.66■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Med21Q9CQ39 144 aa24.65■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Scyl3Q9DBQ7 735 aa24.65■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Eif4enif1Q9EST3 983 aaKnown RBP24.65■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Atp2c2A7L9Z8 944 aa24.65■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Cyp3a59D3Z2W7 503 aa24.65■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Lamc2Q61092 1191 aa24.65■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Hyou1Q9JKR6 999 aaKnown RBP24.65■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Rims1Q99NE5 1463 aa24.65■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 1700017N19RikA0A087WPJ1 469 aa24.65■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 DtnbO70585 659 aa24.65■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Rps6kc1Q8BLK9 1056 aa24.65■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Ephb1Q8CBF3 984 aa24.65■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 HnrnprQ8VHM5 632 aaKnown RBP24.65■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 NonoQ99K48 473 aaKnown RBP24.65■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Shcbp1Q9Z179 668 aa24.65■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Hps5P59438 1126 aa24.65■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Znf148Q61624 794 aa24.65■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Ica1lQ3TY65 431 aa24.65■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Kctd1Q5M956 257 aa24.65■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Glra4Q61603 456 aa24.65■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Usp14Q9JMA1 493 aaKnown RBP24.65■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Uhrf1bp1B2KF50 1429 aa24.65■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Card9A2AIV8 536 aa24.64■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Olfr552E9Q545 317 aa24.64■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Trim43cP86449 446 aa24.64■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Runx2Q08775 607 aa24.64■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Map2k2Q63932 401 aa24.64■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Xpo6Q924Z6 1125 aa24.64■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 PdhbQ9D051 359 aa24.64■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Psmd14O35593 310 aa24.64■■□□□ 1.54
Sh3rf1-201ENSMUST00000034060 Sept1P42209 366 aa24.64■■□□□ 1.54
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms