RNA–Protein interactions for RNA: YMR026C

PEX12, Transcript of C3HC4-type RING-finger peroxin and E3 ubiquitin ligase, yeast

Gene PEX12, Length 1,200 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX12	YMR026C	YCR024C-B	Q3E7Z8	88 aa		4.19	□□□□□ -1.74
PEX12	YMR026C	ARF1	P11076	181 aa	Known RBP	4.18	□□□□□ -1.74
PEX12	YMR026C	DOA1	P36037	715 aa		4.18	□□□□□ -1.74
PEX12	YMR026C	MCR1	P36060	302 aa	Known RBP	4.18	□□□□□ -1.74
PEX12	YMR026C	ANR2	P36090	516 aa	Predicted RBP	4.18	□□□□□ -1.74
PEX12	YMR026C	GPX2	P38143	162 aa		4.18	□□□□□ -1.74
PEX12	YMR026C	YSW1	P38280	609 aa		4.18	□□□□□ -1.74
PEX12	YMR026C	CLD1	P53264	445 aa		4.18	□□□□□ -1.74
PEX12	YMR026C	RRN9	P53437	365 aa		4.18	□□□□□ -1.74
PEX12	YMR026C	YET2	Q04210	160 aa		4.18	□□□□□ -1.74
PEX12	YMR026C	PSY3	Q12318	242 aa		4.18	□□□□□ -1.74
PEX12	YMR026C	TPK3	P05986	398 aa		4.17	□□□□□ -1.74
PEX12	YMR026C	TOA2	P32774	122 aa		4.17	□□□□□ -1.74
PEX12	YMR026C	RAD5	P32849	1169 aa	Predicted RBP	4.17	□□□□□ -1.74
PEX12	YMR026C	PFF1	P38244	976 aa		4.17	□□□□□ -1.74
PEX12	YMR026C	RTT102	P53330	157 aa		4.17	□□□□□ -1.74
PEX12	YMR026C	HST1	P53685	503 aa		4.17	□□□□□ -1.74
PEX12	YMR026C	LIP2	Q06005	328 aa		4.17	□□□□□ -1.74
PEX12	YMR026C	DBP9	Q06218	594 aa	Known RBP	4.17	□□□□□ -1.74
PEX12	YMR026C	YPR091C	Q06833	770 aa		4.17	□□□□□ -1.74
PEX12	YMR026C	MDY2	Q12285	212 aa		4.17	□□□□□ -1.74
PEX12	YMR026C	NAG1	Q8TGN9	163 aa		4.17	□□□□□ -1.74
PEX12	YMR026C	RPL6B	P05739	176 aa	Known RBP	4.16	□□□□□ -1.74
PEX12	YMR026C	YEL043W	P32618	956 aa		4.16	□□□□□ -1.74
PEX12	YMR026C	MLH1	P38920	769 aa		4.16	□□□□□ -1.74
PEX12	YMR026C	RTT105	P40063	208 aa		4.16	□□□□□ -1.74
PEX12	YMR026C	OSW5	P40219	148 aa		4.16	□□□□□ -1.74
PEX12	YMR026C	NAS2	P40555	220 aa		4.16	□□□□□ -1.74
PEX12	YMR026C	CWC22	P53333	577 aa	Known RBP	4.16	□□□□□ -1.74
PEX12	YMR026C	RPL6A	Q02326	176 aa	Known RBP	4.16	□□□□□ -1.74
PEX12	YMR026C	YMR111C	Q04461	462 aa	Predicted RBP	4.16	□□□□□ -1.74
PEX12	YMR026C	ASA1	Q06822	443 aa		4.16	□□□□□ -1.74
PEX12	YMR026C	MFG1	Q07684	458 aa		4.16	□□□□□ -1.74
PEX12	YMR026C	YDR061W	Q12298	539 aa		4.16	□□□□□ -1.74
PEX12	YMR026C	HTZ1	Q12692	134 aa	Known RBP	4.16	□□□□□ -1.74
PEX12	YMR026C	RIB7	P33312	244 aa		4.15	□□□□□ -1.75
PEX12	YMR026C	TIR2	P33890	251 aa		4.15	□□□□□ -1.75
PEX12	YMR026C	MRP21	P38175	177 aa		4.15	□□□□□ -1.75
PEX12	YMR026C	OM14	P38325	134 aa		4.15	□□□□□ -1.75
PEX12	YMR026C	MNL1	P38888	796 aa		4.15	□□□□□ -1.75
PEX12	YMR026C	YNL208W	P40159	199 aa	Known RBP	4.15	□□□□□ -1.75
PEX12	YMR026C	ASN2	P49090	572 aa	Known RBP	4.15	□□□□□ -1.75
PEX12	YMR026C	CUE3	P53137	624 aa	Known RBP	4.15	□□□□□ -1.75
PEX12	YMR026C	TRM112	P53738	135 aa	Predicted RBP	4.15	□□□□□ -1.75
PEX12	YMR026C	YDL114W	Q07530	308 aa		4.15	□□□□□ -1.75
PEX12	YMR026C	RLP24	Q07915	199 aa	Known RBP	4.15	□□□□□ -1.75
PEX12	YMR026C	FCY22	Q12119	530 aa		4.15	□□□□□ -1.75
PEX12	YMR026C	DAP2	P18962	818 aa		4.14	□□□□□ -1.75
PEX12	YMR026C	SUR1	P33300	382 aa		4.14	□□□□□ -1.75
PEX12	YMR026C	KAP104	P38217	918 aa	Known RBP	4.14	□□□□□ -1.75
PEX12	YMR026C	GEP4	P38812	185 aa		4.14	□□□□□ -1.75
PEX12	YMR026C	YIL089W	P40500	205 aa		4.14	□□□□□ -1.75
PEX12	YMR026C	PDR16	P53860	351 aa	Known RBP	4.14	□□□□□ -1.75
PEX12	YMR026C	IPK1	Q06667	281 aa		4.14	□□□□□ -1.75
PEX12	YMR026C	NOP6	Q07623	225 aa	Known RBP	4.14	□□□□□ -1.75
PEX12	YMR026C	LDS2	Q08218	356 aa		4.14	□□□□□ -1.75
PEX12	YMR026C	AAD15	Q08361	143 aa		4.14	□□□□□ -1.75
PEX12	YMR026C	TFB5	Q3E7C1	72 aa	Predicted RBP	4.14	□□□□□ -1.75
PEX12	YMR026C	GRR1	P24814	1151 aa		4.13	□□□□□ -1.75
PEX12	YMR026C	CDC50	P25656	391 aa		4.13	□□□□□ -1.75
PEX12	YMR026C	EPL1	P43572	832 aa		4.13	□□□□□ -1.75
PEX12	YMR026C	SHE4	P51534	789 aa		4.13	□□□□□ -1.75
PEX12	YMR026C	YIP5	P53108	310 aa		4.13	□□□□□ -1.75
PEX12	YMR026C	MLC1	P53141	149 aa		4.13	□□□□□ -1.75
PEX12	YMR026C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
PEX12	YMR026C	RTC5	Q12108	567 aa	Known RBP	4.13	□□□□□ -1.75
PEX12	YMR026C	SSE1	P32589	693 aa	Known RBP	4.12	□□□□□ -1.75
PEX12	YMR026C	PPQ1	P32945	549 aa		4.12	□□□□□ -1.75
PEX12	YMR026C	PCH2	P38126	564 aa		4.12	□□□□□ -1.75
PEX12	YMR026C	ECM8	P38246	354 aa		4.12	□□□□□ -1.75
PEX12	YMR026C	YER186C	P40101	306 aa		4.12	□□□□□ -1.75
PEX12	YMR026C	ABM1	P47146	123 aa		4.12	□□□□□ -1.75
PEX12	YMR026C	AQR1	P53943	586 aa		4.12	□□□□□ -1.75
PEX12	YMR026C	YDL199C	Q12407	687 aa		4.12	□□□□□ -1.75
PEX12	YMR026C	RNA1	P11745	407 aa	Known RBP	4.11	□□□□□ -1.75
PEX12	YMR026C	DAL80	P26343	269 aa		4.11	□□□□□ -1.75
PEX12	YMR026C	FUN26	P31381	517 aa		4.11	□□□□□ -1.75
PEX12	YMR026C	IES6	P32617	166 aa		4.11	□□□□□ -1.75
PEX12	YMR026C	SKI8	Q02793	397 aa	Predicted RBP	4.11	□□□□□ -1.75
PEX12	YMR026C	SPP381	P38282	291 aa	Predicted RBP	4.1	□□□□□ -1.75
PEX12	YMR026C	GDT1	P38301	280 aa	Predicted RBP	4.1	□□□□□ -1.75
PEX12	YMR026C	ERV25	P54837	211 aa	Known RBP	4.1	□□□□□ -1.75
PEX12	YMR026C	PRO2	P54885	456 aa	Known RBP	4.1	□□□□□ -1.75
PEX12	YMR026C	PCL9	Q12477	304 aa		4.1	□□□□□ -1.75
PEX12	YMR026C	RRP36	Q12481	300 aa	Predicted RBP	4.1	□□□□□ -1.75
PEX12	YMR026C	SRN2	Q99176	213 aa		4.1	□□□□□ -1.75
PEX12	YMR026C	MEX67	Q99257	599 aa	Known RBP	4.1	□□□□□ -1.75
PEX12	YMR026C	COX4	P04037	155 aa		4.09	□□□□□ -1.75
PEX12	YMR026C	SPO23	P33757	523 aa		4.09	□□□□□ -1.75
PEX12	YMR026C	SRB2	P34162	210 aa		4.09	□□□□□ -1.75
PEX12	YMR026C	YHR177W	P38867	453 aa		4.09	□□□□□ -1.75
PEX12	YMR026C	ABZ2	Q03266	374 aa		4.09	□□□□□ -1.75
PEX12	YMR026C	MGR3	Q04472	501 aa		4.09	□□□□□ -1.75
PEX12	YMR026C	PRB1	P09232	635 aa		4.08	□□□□□ -1.76
PEX12	YMR026C	ZRC1	P20107	442 aa		4.08	□□□□□ -1.76
PEX12	YMR026C	MID2	P36027	376 aa		4.08	□□□□□ -1.76
PEX12	YMR026C	TIM17	P39515	158 aa		4.08	□□□□□ -1.76
PEX12	YMR026C	AIP1	P46680	615 aa	Known RBP	4.08	□□□□□ -1.76
PEX12	YMR026C	YNL143C	P53908	130 aa		4.08	□□□□□ -1.76
PEX12	YMR026C	MRPS16	Q02608	121 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 38.2 ms