RNA–Protein interactions for RNA: YGR247W

CPD1, Transcript of Cyclic nucleotide phosphodiesterase, yeastyeast

Gene CPD1, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPD1YGR247W DBP6P53734 629 aaKnown RBP8.08□□□□□ -1.12
CPD1YGR247W YPL039WQ03080 316 aa8.08□□□□□ -1.12
CPD1YGR247W RAF1Q06891 181 aa8.08□□□□□ -1.12
CPD1YGR247W YOL131WQ08270 108 aa8.08□□□□□ -1.12
CPD1YGR247W WSC3Q12215 556 aa8.08□□□□□ -1.12
CPD1YGR247W RPS21BQ3E754 87 aaKnown RBP8.08□□□□□ -1.12
CPD1YGR247W Q0297Q9ZZV8 51 aa8.08□□□□□ -1.12
CPD1YGR247W MDH2P22133 377 aa8.07□□□□□ -1.12
CPD1YGR247W PHO91P27514 894 aa8.07□□□□□ -1.12
CPD1YGR247W SEC61P32915 480 aa8.07□□□□□ -1.12
CPD1YGR247W YFR054CP43622 192 aa8.07□□□□□ -1.12
CPD1YGR247W IMA1P53051 589 aa8.07□□□□□ -1.12
CPD1YGR247W YNR068CP53754 272 aa8.07□□□□□ -1.12
CPD1YGR247W RAD30Q04049 632 aa8.07□□□□□ -1.12
CPD1YGR247W SNX41Q04053 625 aa8.07□□□□□ -1.12
CPD1YGR247W API2Q04413 109 aa8.07□□□□□ -1.12
CPD1YGR247W ARG81P05085 880 aa8.06□□□□□ -1.12
CPD1YGR247W YMR085WP0CF18 432 aa8.06□□□□□ -1.12
CPD1YGR247W STE6P12866 1290 aa8.06□□□□□ -1.12
CPD1YGR247W THR1P17423 357 aaKnown RBP8.06□□□□□ -1.12
CPD1YGR247W UTR1P21373 530 aa8.06□□□□□ -1.12
CPD1YGR247W AVT7P40501 490 aa8.06□□□□□ -1.12
CPD1YGR247W GPP1P41277 250 aaKnown RBP8.06□□□□□ -1.12
CPD1YGR247W DCP2P53550 970 aaKnown RBP8.06□□□□□ -1.12
CPD1YGR247W EKI1Q03764 534 aa8.06□□□□□ -1.12
CPD1YGR247W SSQ1Q05931 657 aaPredicted RBP8.06□□□□□ -1.12
CPD1YGR247W YOR214CQ12282 236 aa8.06□□□□□ -1.12
CPD1YGR247W RPN6Q12377 434 aa8.06□□□□□ -1.12
CPD1YGR247W MRPL39P36533 70 aa8.05□□□□□ -1.12
CPD1YGR247W ARN2P38724 620 aa8.05□□□□□ -1.12
CPD1YGR247W YNL208WP40159 199 aaKnown RBP8.05□□□□□ -1.12
CPD1YGR247W QDR2P40474 542 aa8.05□□□□□ -1.12
CPD1YGR247W YKU80Q04437 629 aa8.05□□□□□ -1.12
CPD1YGR247W PML1Q07930 204 aaPredicted RBP8.05□□□□□ -1.12
CPD1YGR247W PSY3Q12318 242 aa8.05□□□□□ -1.12
CPD1YGR247W PUT2P07275 575 aa8.04□□□□□ -1.12
CPD1YGR247W PHO81P17442 1178 aa8.04□□□□□ -1.12
CPD1YGR247W RPC19P28000 142 aaKnown RBP8.04□□□□□ -1.12
CPD1YGR247W MRPL17P36528 281 aa8.04□□□□□ -1.12
CPD1YGR247W RGI1P40043 161 aaPredicted RBP8.04□□□□□ -1.12
CPD1YGR247W YTA6P40328 754 aa8.04□□□□□ -1.12
CPD1YGR247W ARF3P40994 183 aaRIP-Chip data8.04□□□□□ -1.12not detected
CPD1YGR247W YFL051CP43552 160 aa8.04□□□□□ -1.12
CPD1YGR247W RDL2Q08742 149 aaKnown RBP8.04□□□□□ -1.12
CPD1YGR247W NPC2Q12408 173 aa8.04□□□□□ -1.12
CPD1YGR247W PRB1P09232 635 aa8.03□□□□□ -1.12
CPD1YGR247W SAN1P22470 610 aa8.03□□□□□ -1.12
CPD1YGR247W MRPS5P33759 307 aa8.03□□□□□ -1.12
CPD1YGR247W TOM22P49334 152 aa8.03□□□□□ -1.12
CPD1YGR247W RNR4P49723 345 aaKnown RBP8.03□□□□□ -1.12
CPD1YGR247W MRPL1Q04599 285 aa8.03□□□□□ -1.12
CPD1YGR247W COX20Q04935 205 aa8.03□□□□□ -1.12
CPD1YGR247W ENB1Q08299 606 aa8.03□□□□□ -1.12
CPD1YGR247W GRE1Q08969 168 aa8.03□□□□□ -1.12
CPD1YGR247W MCP1Q12106 302 aa8.03□□□□□ -1.12
CPD1YGR247W DBP10Q12389 995 aaKnown RBP8.03□□□□□ -1.12
CPD1YGR247W DET1Q99288 334 aaKnown RBP8.03□□□□□ -1.12
CPD1YGR247W YCK1P23291 538 aa8.02□□□□□ -1.13
CPD1YGR247W SCO1P23833 295 aa8.02□□□□□ -1.13
CPD1YGR247W CLB3P24870 427 aa8.02□□□□□ -1.13
CPD1YGR247W YKL187CP34231 750 aa8.02□□□□□ -1.13
CPD1YGR247W MTC4P38335 694 aaKnown RBP8.02□□□□□ -1.13
CPD1YGR247W YHL012WP38709 493 aa8.02□□□□□ -1.13
CPD1YGR247W SKN7P38889 622 aa8.02□□□□□ -1.13
CPD1YGR247W IDP2P41939 412 aa8.02□□□□□ -1.13
CPD1YGR247W NIT2P47016 307 aa8.02□□□□□ -1.13
CPD1YGR247W LGE1Q02796 332 aaKnown RBP8.02□□□□□ -1.13
CPD1YGR247W YMR265CQ03508 461 aaKnown RBP8.02□□□□□ -1.13
CPD1YGR247W RSN1Q03516 953 aa8.02□□□□□ -1.13
CPD1YGR247W ATG38Q05789 226 aaKnown RBP8.02□□□□□ -1.13
CPD1YGR247W SPO24Q3E752 67 aa8.02□□□□□ -1.13
CPD1YGR247W TFS1P14306 219 aa8.01□□□□□ -1.13
CPD1YGR247W MER1P16523 270 aa8.01□□□□□ -1.13
CPD1YGR247W DTR1P38125 572 aa8.01□□□□□ -1.13
CPD1YGR247W ZTA1P38230 334 aaKnown RBP8.01□□□□□ -1.13
CPD1YGR247W LAS21P40367 830 aa8.01□□□□□ -1.13
CPD1YGR247W COS6P53344 381 aa8.01□□□□□ -1.13
CPD1YGR247W RNT1Q02555 471 aa8.01□□□□□ -1.13
CPD1YGR247W TMC1Q08422 150 aaPredicted RBP8.01□□□□□ -1.13
CPD1YGR247W YDL180WQ12301 547 aa8.01□□□□□ -1.13
CPD1YGR247W RHO1P06780 209 aaKnown RBP8□□□□□ -1.13
CPD1YGR247W SEC2P17065 759 aa8□□□□□ -1.13
CPD1YGR247W CYS4P32582 507 aaKnown RBP8□□□□□ -1.13
CPD1YGR247W ECM34P38728 170 aa8□□□□□ -1.13
CPD1YGR247W MTC6P38849 526 aa8□□□□□ -1.13
CPD1YGR247W YHR180WP38868 163 aa8□□□□□ -1.13
CPD1YGR247W GDS1P41913 522 aa8□□□□□ -1.13
CPD1YGR247W CCT7P42943 550 aaKnown RBP8□□□□□ -1.13
CPD1YGR247W LYS5P50113 272 aa8□□□□□ -1.13
CPD1YGR247W ACS1Q01574 713 aa8□□□□□ -1.13
CPD1YGR247W MMT1Q03218 510 aa8□□□□□ -1.13
CPD1YGR247W CTL1Q03220 320 aaKnown RBP8□□□□□ -1.13
CPD1YGR247W COQ11Q05892 277 aa8□□□□□ -1.13
CPD1YGR247W DCI1Q08558 271 aa8□□□□□ -1.13
CPD1YGR247W CCA1P21269 546 aa7.99□□□□□ -1.13
CPD1YGR247W RPS1BP23248 255 aaKnown RBP7.99□□□□□ -1.13
CPD1YGR247W BPH1P25356 2167 aa7.99□□□□□ -1.13
CPD1YGR247W RAD14P28519 371 aa7.99□□□□□ -1.13
CPD1YGR247W TSC10P38342 320 aa7.99□□□□□ -1.13
CPD1YGR247W RCK1P38622 512 aa7.99□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 126 ms