RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	MRPL35	Q06678	367 aa		4.84	□□□□□ -1.63
RPN5	YDL147W	YDR262W	Q12331	272 aa		4.84	□□□□□ -1.63
RPN5	YDL147W	SPO24	Q3E752	67 aa		4.84	□□□□□ -1.63
RPN5	YDL147W	MEX67	Q99257	599 aa	Known RBP	4.84	□□□□□ -1.63
RPN5	YDL147W	CPR4	P25334	318 aa		4.83	□□□□□ -1.64
RPN5	YDL147W	PHA2	P32452	334 aa		4.83	□□□□□ -1.64
RPN5	YDL147W	VAM7	P32912	316 aa		4.83	□□□□□ -1.64
RPN5	YDL147W	SWC5	P38326	303 aa		4.83	□□□□□ -1.64
RPN5	YDL147W	SBE22	P38814	852 aa		4.83	□□□□□ -1.64
RPN5	YDL147W	YHR182W	P38870	785 aa		4.83	□□□□□ -1.64
RPN5	YDL147W	YMR134W	P40207	237 aa		4.83	□□□□□ -1.64
RPN5	YDL147W	SMC5	Q08204	1093 aa		4.83	□□□□□ -1.64
RPN5	YDL147W	EAF3	Q12432	401 aa		4.83	□□□□□ -1.64
RPN5	YDL147W	OM45	P16547	393 aa		4.82	□□□□□ -1.64
RPN5	YDL147W	DBP3	P20447	523 aa	Known RBP	4.82	□□□□□ -1.64
RPN5	YDL147W	MXR2	P25566	168 aa		4.82	□□□□□ -1.64
RPN5	YDL147W	YGL260W	P53056	76 aa		4.82	□□□□□ -1.64
RPN5	YDL147W	MTQ1	P53944	314 aa		4.82	□□□□□ -1.64
RPN5	YDL147W	YMR102C	Q03177	834 aa		4.82	□□□□□ -1.64
RPN5	YDL147W	YMR010W	Q03687	405 aa		4.82	□□□□□ -1.64
RPN5	YDL147W	CAB5	Q03941	241 aa		4.82	□□□□□ -1.64
RPN5	YDL147W	STE23	Q06010	1027 aa		4.82	□□□□□ -1.64
RPN5	YDL147W	CUR1	Q06469	252 aa		4.82	□□□□□ -1.64
RPN5	YDL147W	YCL021W-A	Q96VH3	125 aa		4.82	□□□□□ -1.64
RPN5	YDL147W	TRP1	P00912	224 aa		4.81	□□□□□ -1.64
RPN5	YDL147W	RPS16A	P0CX51	143 aa	Known RBP	4.81	□□□□□ -1.64
RPN5	YDL147W	RPS16B	P0CX52	143 aa	Known RBP	4.81	□□□□□ -1.64
RPN5	YDL147W	PUT4	P15380	627 aa		4.81	□□□□□ -1.64
RPN5	YDL147W	ARF2	P19146	181 aa	Known RBP	4.81	□□□□□ -1.64
RPN5	YDL147W	ECM8	P38246	354 aa		4.81	□□□□□ -1.64
RPN5	YDL147W	RBG1	P39729	369 aa		4.81	□□□□□ -1.64
RPN5	YDL147W	YIL067C	P40514	678 aa		4.81	□□□□□ -1.64
RPN5	YDL147W	HAC1	P41546	238 aa		4.81	□□□□□ -1.64
RPN5	YDL147W	AIM24	P47127	394 aa		4.81	□□□□□ -1.64
RPN5	YDL147W	CWC25	P53854	179 aa	Known RBP	4.81	□□□□□ -1.64
RPN5	YDL147W	NAT4	Q04751	285 aa		4.81	□□□□□ -1.64
RPN5	YDL147W	YLR413W	Q06689	675 aa		4.81	□□□□□ -1.64
RPN5	YDL147W	TSR1	Q07381	788 aa	Known RBP	4.81	□□□□□ -1.64
RPN5	YDL147W	NDD1	Q08887	554 aa		4.81	□□□□□ -1.64
RPN5	YDL147W	YOR387C	Q08910	206 aa		4.81	□□□□□ -1.64
RPN5	YDL147W	YBR298C-A	Q8TGK4	73 aa		4.81	□□□□□ -1.64
RPN5	YDL147W	RPL18A	P0CX49	186 aa	Known RBP	4.8	□□□□□ -1.64
RPN5	YDL147W	RPL18B	P0CX50	186 aa	Known RBP	4.8	□□□□□ -1.64
RPN5	YDL147W	SAR1	P20606	190 aa	Known RBP	4.8	□□□□□ -1.64
RPN5	YDL147W	CIN8	P27895	1000 aa		4.8	□□□□□ -1.64
RPN5	YDL147W	MRPS5	P33759	307 aa		4.8	□□□□□ -1.64
RPN5	YDL147W	AIP1	P46680	615 aa	Known RBP	4.8	□□□□□ -1.64
RPN5	YDL147W	LCB3	P47013	409 aa		4.8	□□□□□ -1.64
RPN5	YDL147W	VOA1	P53262	265 aa		4.8	□□□□□ -1.64
RPN5	YDL147W	YMR111C	Q04461	462 aa	Predicted RBP	4.8	□□□□□ -1.64
RPN5	YDL147W	HHF1	P02309	103 aa	Known RBP	4.79	□□□□□ -1.64
RPN5	YDL147W	NAM2	P11325	894 aa		4.79	□□□□□ -1.64
RPN5	YDL147W	VMA5	P31412	392 aa	Known RBP	4.79	□□□□□ -1.64
RPN5	YDL147W	YPS1	P32329	569 aa		4.79	□□□□□ -1.64
RPN5	YDL147W	DPH5	P32469	300 aa	Predicted RBP	4.79	□□□□□ -1.64
RPN5	YDL147W	PPQ1	P32945	549 aa		4.79	□□□□□ -1.64
RPN5	YDL147W	FMP46	P36141	133 aa	Known RBP	4.79	□□□□□ -1.64
RPN5	YDL147W	NDT80	P38830	627 aa		4.79	□□□□□ -1.64
RPN5	YDL147W	CCT4	P39078	528 aa	Known RBP	4.79	□□□□□ -1.64
RPN5	YDL147W	LST7	P53237	242 aa		4.79	□□□□□ -1.64
RPN5	YDL147W	MTM1	P53320	366 aa		4.79	□□□□□ -1.64
RPN5	YDL147W	COS1	P53822	381 aa		4.79	□□□□□ -1.64
RPN5	YDL147W	PBA1	Q05778	276 aa		4.79	□□□□□ -1.64
RPN5	YDL147W	BUR2	Q05949	395 aa		4.79	□□□□□ -1.64
RPN5	YDL147W	PCL9	Q12477	304 aa		4.79	□□□□□ -1.64
RPN5	YDL147W	YCR024C-B	Q3E7Z8	88 aa		4.79	□□□□□ -1.64
RPN5	YDL147W	CYC3	P06182	269 aa		4.78	□□□□□ -1.64
RPN5	YDL147W	RIB7	P33312	244 aa		4.78	□□□□□ -1.64
RPN5	YDL147W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
RPN5	YDL147W	PTH1	P38876	190 aa	Known RBP	4.78	□□□□□ -1.64
RPN5	YDL147W	BTT1	P40314	149 aa	Predicted RBP	4.78	□□□□□ -1.64
RPN5	YDL147W	ABM1	P47146	123 aa		4.78	□□□□□ -1.64
RPN5	YDL147W	SCS3	P53012	380 aa		4.78	□□□□□ -1.64
RPN5	YDL147W	GAT3	Q07928	141 aa		4.78	□□□□□ -1.64
RPN5	YDL147W	YGK3	Q12222	375 aa	Predicted RBP	4.78	□□□□□ -1.64
RPN5	YDL147W	DCP1	Q12517	231 aa	Predicted RBP	4.78	□□□□□ -1.64
RPN5	YDL147W	YER078W-A	Q3E7A2	54 aa		4.78	□□□□□ -1.64
RPN5	YDL147W	ZUO1	P32527	433 aa	Known RBP	4.77	□□□□□ -1.65
RPN5	YDL147W	YBL059W	P34224	193 aa		4.77	□□□□□ -1.65
RPN5	YDL147W	MYO3	P36006	1272 aa		4.77	□□□□□ -1.65
RPN5	YDL147W	VPS45	P38932	577 aa		4.77	□□□□□ -1.65
RPN5	YDL147W	KEG1	P43614	200 aa		4.77	□□□□□ -1.65
RPN5	YDL147W	YJR030C	P47101	745 aa		4.77	□□□□□ -1.65
RPN5	YDL147W	YLH47	Q06493	454 aa		4.77	□□□□□ -1.65
RPN5	YDL147W	POP5	P28005	173 aa		4.76	□□□□□ -1.65
RPN5	YDL147W	DEG1	P31115	442 aa	Known RBP	4.76	□□□□□ -1.65
RPN5	YDL147W	PEX32	P38292	413 aa		4.76	□□□□□ -1.65
RPN5	YDL147W	UTP25	P40498	721 aa	Known RBP	4.76	□□□□□ -1.65
RPN5	YDL147W	LOC1	P43586	204 aa	Predicted RBP	4.76	□□□□□ -1.65
RPN5	YDL147W	TRF5	P48561	642 aa	Known RBP	4.76	□□□□□ -1.65
RPN5	YDL147W	MRPL23	Q12487	163 aa	Predicted RBP	4.76	□□□□□ -1.65
RPN5	YDL147W	DET1	Q99288	334 aa	Known RBP	4.76	□□□□□ -1.65
RPN5	YDL147W	FAR1	P21268	830 aa		4.75	□□□□□ -1.65
RPN5	YDL147W	DAL2	P25335	343 aa		4.75	□□□□□ -1.65
RPN5	YDL147W	KAR9	P32526	644 aa		4.75	□□□□□ -1.65
RPN5	YDL147W	IST2	P38250	946 aa		4.75	□□□□□ -1.65
RPN5	YDL147W	IML3	P38265	245 aa		4.75	□□□□□ -1.65
RPN5	YDL147W	LOH1	P47055	219 aa		4.75	□□□□□ -1.65
RPN5	YDL147W	RIB4	P50861	169 aa	Predicted RBP	4.75	□□□□□ -1.65
RPN5	YDL147W	PNC1	P53184	216 aa	Known RBP	4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 62.9 ms