RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 CES2O00748 559 aa15.1■□□□□ 0.01
PHGDH-233ENST00000642021 PDXKO00764 312 aa15.1■□□□□ 0.01
PHGDH-233ENST00000642021 ERLIN2O94905 339 aa15.1■□□□□ 0.01
PHGDH-233ENST00000642021 NR3C1P04150 777 aa15.1■□□□□ 0.01
PHGDH-233ENST00000642021 JAM2P57087 298 aa15.1■□□□□ 0.01
PHGDH-233ENST00000642021 DDR1Q08345 913 aa15.1■□□□□ 0.01
PHGDH-233ENST00000642021 TCP10Q12799 353 aa15.1■□□□□ 0.01
PHGDH-233ENST00000642021 SLFN13Q68D06 897 aa15.1■□□□□ 0.01
PHGDH-233ENST00000642021 PBKQ96KB5 322 aa15.1■□□□□ 0.01
PHGDH-233ENST00000642021 RGL1Q9NZL6 768 aa15.1■□□□□ 0.01
PHGDH-233ENST00000642021 AMACRQ9UHK6 382 aa15.1■□□□□ 0.01
PHGDH-233ENST00000642021 NOC2LQ9Y3T9 749 aaKnown RBP15.1■□□□□ 0.01
PHGDH-233ENST00000642021 BZW2Q9Y6E2 419 aaKnown RBP15.1■□□□□ 0.01
PHGDH-233ENST00000642021 MYO3BQ8WXR4 1341 aa15.1■□□□□ 0.01
PHGDH-233ENST00000642021 USH1GQ495M9 461 aa15.1■□□□□ 0.01
PHGDH-233ENST00000642021 OLIG1Q8TAK6 271 aa15.1■□□□□ 0.01
PHGDH-233ENST00000642021 COA1Q9GZY4 146 aa15.1■□□□□ 0.01
PHGDH-233ENST00000642021 FAM107BQ9H098 131 aa15.1■□□□□ 0.01
PHGDH-233ENST00000642021 EPN3Q9H201 632 aa15.1■□□□□ 0.01
PHGDH-233ENST00000642021 CENPHQ9H3R5 247 aa15.1■□□□□ 0.01
PHGDH-233ENST00000642021 TMBIM4Q9HC24 238 aa15.1■□□□□ 0.01
PHGDH-233ENST00000642021 STXBP5LQ9Y2K9 1186 aa15.1■□□□□ 0.01
PHGDH-233ENST00000642021 BHMG1C9JSJ3 638 aaPredicted RBP15.09■□□□□ 0.01
PHGDH-233ENST00000642021 EML1O00423 815 aa15.09■□□□□ 0.01
PHGDH-233ENST00000642021 TGFB1I1O43294 461 aa15.09■□□□□ 0.01
PHGDH-233ENST00000642021 PPP1R37O75864 691 aa15.09■□□□□ 0.01
PHGDH-233ENST00000642021 HPDP32754 393 aaPredicted RBP15.09■□□□□ 0.01
PHGDH-233ENST00000642021 NAA35Q5VZE5 725 aa15.09■□□□□ 0.01
PHGDH-233ENST00000642021 FBXW10Q5XX13 1052 aa15.09■□□□□ 0.01
PHGDH-233ENST00000642021 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.09■□□□□ 0.016e-10■■■■□ 22.4
PHGDH-233ENST00000642021 KCNQ5Q9NR82 932 aa15.09■□□□□ 0.01
PHGDH-233ENST00000642021 GCNT4Q9P109 453 aa15.09■□□□□ 0.01
PHGDH-233ENST00000642021 NR2E1Q9Y466 385 aa15.09■□□□□ 0.01
PHGDH-233ENST00000642021 MSH4O15457 936 aa15.09■□□□□ 0.01
PHGDH-233ENST00000642021 GFPT2O94808 682 aa15.09■□□□□ 0.01
PHGDH-233ENST00000642021 GCNT3O95395 438 aa15.09■□□□□ 0.01
PHGDH-233ENST00000642021 HLA-DOAP06340 250 aa15.09■□□□□ 0.01
PHGDH-233ENST00000642021 MDH1P40925 334 aaKnown RBP15.09■□□□□ 0.01
PHGDH-233ENST00000642021 PTGISQ16647 500 aa15.09■□□□□ 0.01
PHGDH-233ENST00000642021 PEX26Q7Z412 305 aa15.09■□□□□ 0.01
PHGDH-233ENST00000642021 SLFN11Q7Z7L1 901 aa15.09■□□□□ 0.01
PHGDH-233ENST00000642021 LRRC4CQ9HCJ2 640 aa15.09■□□□□ 0.01
PHGDH-233ENST00000642021 OSGEPQ9NPF4 335 aa15.09■□□□□ 0.01
PHGDH-233ENST00000642021 FOCADQ5VW36 1801 aa15.09■□□□□ 0.01
PHGDH-233ENST00000642021 DDTLA6NHG4 134 aaPredicted RBP15.08■□□□□ 0.01
PHGDH-233ENST00000642021 A6NNZ2 444 aa15.08■□□□□ 0.01
PHGDH-233ENST00000642021 PGRMC1O00264 195 aaKnown RBP15.08■□□□□ 0.01
PHGDH-233ENST00000642021 KRIT1O00522 736 aa15.08■□□□□ 0.01
PHGDH-233ENST00000642021 ZBTB39O15060 712 aa15.08■□□□□ 0.01
PHGDH-233ENST00000642021 CALUO43852 315 aaPredicted RBP15.08■□□□□ 0.01
PHGDH-233ENST00000642021 FLOT1O75955 427 aa15.08■□□□□ 0.01
PHGDH-233ENST00000642021 CLSTN1O94985 981 aa15.08■□□□□ 0.01
PHGDH-233ENST00000642021 H2AFZP0C0S5 128 aa15.08■□□□□ 0.01
PHGDH-233ENST00000642021 HOXA13P31271 388 aaPredicted RBP15.08■□□□□ 0.01
PHGDH-233ENST00000642021 INPP5BP32019 993 aa15.08■□□□□ 0.01
PHGDH-233ENST00000642021 SF3B2Q13435 895 aaKnown RBP15.08■□□□□ 0.01
PHGDH-233ENST00000642021 TUBB8Q3ZCM7 444 aa15.08■□□□□ 0.01
PHGDH-233ENST00000642021 H2AFVQ71UI9 128 aa15.08■□□□□ 0.01
PHGDH-233ENST00000642021 KSR1Q8IVT5 923 aa15.08■□□□□ 0.01
PHGDH-233ENST00000642021 LNX1Q8TBB1 728 aaPredicted RBP15.08■□□□□ 0.01
PHGDH-233ENST00000642021 U2AF1L4Q8WU68 220 aaKnown RBP15.08■□□□□ 0.01
PHGDH-233ENST00000642021 CRAMP1Q96RY5 1269 aa15.08■□□□□ 0.01
PHGDH-233ENST00000642021 CELF4Q9BZC1 486 aaKnown RBP15.08■□□□□ 0.01
PHGDH-233ENST00000642021 TYW1Q9NV66 732 aaKnown RBP15.08■□□□□ 0.01
PHGDH-233ENST00000642021 GEMIN8Q9NWZ8 242 aaKnown RBP15.08■□□□□ 0.01
PHGDH-233ENST00000642021 DAPK3O43293 454 aa15.08■□□□□ 0
PHGDH-233ENST00000642021 Q4G0T1 1027 aa15.08■□□□□ 0
PHGDH-233ENST00000642021 ICE2Q659A1 982 aa15.08■□□□□ 0
PHGDH-233ENST00000642021 MOXD1Q6UVY6 613 aa15.08■□□□□ 0
PHGDH-233ENST00000642021 NT5DC3Q86UY8 548 aa15.08■□□□□ 0
PHGDH-233ENST00000642021 PIGOQ8TEQ8 1089 aa15.08■□□□□ 0
PHGDH-233ENST00000642021 MKL1Q969V6 931 aa15.08■□□□□ 0
PHGDH-233ENST00000642021 BORCS6Q96GS4 357 aa15.08■□□□□ 0
PHGDH-233ENST00000642021 CCT8L2Q96SF2 557 aa15.08■□□□□ 0
PHGDH-233ENST00000642021 GLT8D2Q9H1C3 349 aa15.08■□□□□ 0
PHGDH-233ENST00000642021 VAV3Q9UKW4 847 aa15.08■□□□□ 0
PHGDH-233ENST00000642021 HMGB1P1B2RPK0 211 aaPredicted RBP15.07■□□□□ 0
PHGDH-233ENST00000642021 GALCP54803 685 aa15.07■□□□□ 0
PHGDH-233ENST00000642021 ZNF844Q08AG5 666 aa15.07■□□□□ 0
PHGDH-233ENST00000642021 AP3B2Q13367 1082 aa15.07■□□□□ 0
PHGDH-233ENST00000642021 ZC2HC1CQ53FD0 456 aaPredicted RBP15.07■□□□□ 0
PHGDH-233ENST00000642021 DAAM2Q86T65 1068 aa15.07■□□□□ 0
PHGDH-233ENST00000642021 C1orf131Q8NDD1 294 aaKnown RBP15.07■□□□□ 0
PHGDH-233ENST00000642021 ERMNQ8TAM6 284 aa15.07■□□□□ 0
PHGDH-233ENST00000642021 ZNF473Q8WTR7 871 aaKnown RBP15.07■□□□□ 0
PHGDH-233ENST00000642021 ZC3H12CQ9C0D7 883 aaKnown RBP15.07■□□□□ 0
PHGDH-233ENST00000642021 ATAD5Q96QE3 1844 aa15.07■□□□□ 0
PHGDH-233ENST00000642021 PPEF1O14829 653 aaPredicted RBP15.07■□□□□ 0
PHGDH-233ENST00000642021 OPLAHO14841 1288 aa15.07■□□□□ 0
PHGDH-233ENST00000642021 TTI1O43156 1089 aa15.07■□□□□ 0
PHGDH-233ENST00000642021 SLC26A4O43511 780 aa15.07■□□□□ 0
PHGDH-233ENST00000642021 NMT1P30419 496 aaKnown RBP15.07■□□□□ 0
PHGDH-233ENST00000642021 HDLBPQ00341 1268 aaKnown RBP15.07■□□□□ 0
PHGDH-233ENST00000642021 CUL1Q13616 776 aa15.07■□□□□ 0
PHGDH-233ENST00000642021 IFI16Q16666 785 aaKnown RBP15.07■□□□□ 0
PHGDH-233ENST00000642021 BMT2Q1RMZ1 405 aa15.07■□□□□ 0
PHGDH-233ENST00000642021 SP8Q8IXZ3 490 aa15.07■□□□□ 0
PHGDH-233ENST00000642021 RASGEF1CQ8N431 466 aa15.07■□□□□ 0
PHGDH-233ENST00000642021 CALR3Q96L12 384 aaKnown RBP15.07■□□□□ 0
PHGDH-233ENST00000642021 FBXL5Q9UKA1 691 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms