RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 CDHR1Q96JP9 859 aa11.42□□□□□ -0.58
PHGDH-222ENST00000641587 PPP1R16BQ96T49 567 aa11.42□□□□□ -0.58
PHGDH-222ENST00000641587 FTHL17Q9BXU8 183 aa11.42□□□□□ -0.58
PHGDH-222ENST00000641587 LRRC2Q9BYS8 371 aa11.42□□□□□ -0.58
PHGDH-222ENST00000641587 CDHR5Q9HBB8 845 aa11.42□□□□□ -0.58
PHGDH-222ENST00000641587 JPH1Q9HDC5 661 aaPredicted RBP11.42□□□□□ -0.58
PHGDH-222ENST00000641587 JADE2Q9NQC1 790 aa11.42□□□□□ -0.58
PHGDH-222ENST00000641587 SLC9A2Q9UBY0 812 aa11.42□□□□□ -0.58
PHGDH-222ENST00000641587 GINS2Q9Y248 185 aa11.42□□□□□ -0.58
PHGDH-222ENST00000641587 DMDP11532 3685 aa11.41□□□□□ -0.58
PHGDH-222ENST00000641587 RRN3P2A6NIE6 340 aa11.41□□□□□ -0.58
PHGDH-222ENST00000641587 M0QZ92 97 aa11.41□□□□□ -0.58
PHGDH-222ENST00000641587 SH2B2O14492 632 aaPredicted RBP11.41□□□□□ -0.58
PHGDH-222ENST00000641587 STAG3L1P0CL83 205 aa11.41□□□□□ -0.58
PHGDH-222ENST00000641587 ARP10275 920 aa11.41□□□□□ -0.58
PHGDH-222ENST00000641587 SP100P23497 879 aaPredicted RBP11.41□□□□□ -0.58
PHGDH-222ENST00000641587 KIF5BP33176 963 aa11.41□□□□□ -0.58
PHGDH-222ENST00000641587 ERVFC1P60507 584 aa11.41□□□□□ -0.58
PHGDH-222ENST00000641587 ACTR2P61160 394 aa11.41□□□□□ -0.58
PHGDH-222ENST00000641587 APOBRQ0VD83 1088 aa11.41□□□□□ -0.58
PHGDH-222ENST00000641587 CBX2Q14781 532 aaPredicted RBP11.41□□□□□ -0.58
PHGDH-222ENST00000641587 NAALADL2Q58DX5 795 aa11.41□□□□□ -0.58
PHGDH-222ENST00000641587 SPOUT1Q5T280 376 aaKnown RBP11.41□□□□□ -0.58
PHGDH-222ENST00000641587 FAM102BQ5T8I3 360 aa11.41□□□□□ -0.58
PHGDH-222ENST00000641587 NFXL1Q6ZNB6 911 aa11.41□□□□□ -0.58
PHGDH-222ENST00000641587 BMP8AQ7Z5Y6 402 aa11.41□□□□□ -0.58
PHGDH-222ENST00000641587 MAP3K14Q99558 947 aa11.41□□□□□ -0.58
PHGDH-222ENST00000641587 APOL5Q9BWW9 433 aa11.41□□□□□ -0.58
PHGDH-222ENST00000641587 CELF4Q9BZC1 486 aaKnown RBP11.41□□□□□ -0.58
PHGDH-222ENST00000641587 TLE6Q9H808 572 aa11.41□□□□□ -0.58
PHGDH-222ENST00000641587 ERVK-5Q9HDB9 667 aa11.41□□□□□ -0.58
PHGDH-222ENST00000641587 KCNH7Q9NS40 1196 aa11.41□□□□□ -0.58
PHGDH-222ENST00000641587 DAXXQ9UER7 740 aaPredicted RBP11.41□□□□□ -0.58
PHGDH-222ENST00000641587 CDH22Q9UJ99 828 aa11.41□□□□□ -0.58
PHGDH-222ENST00000641587 LRFN2Q9ULH4 789 aa11.41□□□□□ -0.58
PHGDH-222ENST00000641587 NAP1L2Q9ULW6 460 aaPredicted RBP11.41□□□□□ -0.58
PHGDH-222ENST00000641587 PCDHA2Q9Y5H9 948 aa11.41□□□□□ -0.58
PHGDH-222ENST00000641587 SPDYE3A6NKU9 549 aa11.4□□□□□ -0.58
PHGDH-222ENST00000641587 TBKBP1A7MCY6 615 aa11.4□□□□□ -0.58
PHGDH-222ENST00000641587 DDX39AO00148 427 aaKnown RBP11.4□□□□□ -0.58
PHGDH-222ENST00000641587 FGF18O76093 207 aa11.4□□□□□ -0.58
PHGDH-222ENST00000641587 SARSP49591 514 aaKnown RBP11.4□□□□□ -0.58
PHGDH-222ENST00000641587 AK2P54819 239 aa11.4□□□□□ -0.58
PHGDH-222ENST00000641587 PTPN5P54829 565 aa11.4□□□□□ -0.58
PHGDH-222ENST00000641587 KRT76Q01546 638 aa11.4□□□□□ -0.58
PHGDH-222ENST00000641587 ITGB3BPQ13352 177 aaPredicted RBP11.4□□□□□ -0.58
PHGDH-222ENST00000641587 ANKRD1Q15327 319 aa11.4□□□□□ -0.58
PHGDH-222ENST00000641587 TYW1BQ6NUM6 668 aa11.4□□□□□ -0.58
PHGDH-222ENST00000641587 MTHFD1LQ6UB35 978 aa11.4□□□□□ -0.58
PHGDH-222ENST00000641587 Q6ZUG5 572 aa11.4□□□□□ -0.58
PHGDH-222ENST00000641587 HEATR3Q7Z4Q2 680 aa11.4□□□□□ -0.58
PHGDH-222ENST00000641587 SUGP1Q8IWZ8 645 aaKnown RBP11.4□□□□□ -0.58
PHGDH-222ENST00000641587 MICAL1Q8TDZ2 1067 aa11.4□□□□□ -0.58
PHGDH-222ENST00000641587 ASIC4Q96FT7 647 aa11.4□□□□□ -0.58
PHGDH-222ENST00000641587 MXRA8Q9BRK3 442 aa11.4□□□□□ -0.58
PHGDH-222ENST00000641587 PHF7Q9BWX1 381 aaPredicted RBP11.4□□□□□ -0.58
PHGDH-222ENST00000641587 AZI2Q9H6S1 392 aa11.4□□□□□ -0.58
PHGDH-222ENST00000641587 NOC2LQ9Y3T9 749 aaKnown RBP11.4□□□□□ -0.58
PHGDH-222ENST00000641587 SQORQ9Y6N5 450 aa11.4□□□□□ -0.58
PHGDH-222ENST00000641587 KDM3AQ9Y4C1 1321 aa11.39□□□□□ -0.59
PHGDH-222ENST00000641587 VPS13AQ96RL7 3174 aa11.39□□□□□ -0.59
PHGDH-222ENST00000641587 SMIM35A0A1B0GVV1 85 aa11.39□□□□□ -0.59
PHGDH-222ENST00000641587 CCDC69A6NI79 296 aa11.39□□□□□ -0.59
PHGDH-222ENST00000641587 CD2BP2O95400 341 aaKnown RBP11.39□□□□□ -0.59
PHGDH-222ENST00000641587 CCNE2O96020 404 aa11.39□□□□□ -0.59
PHGDH-222ENST00000641587 PDGFBP01127 241 aaPredicted RBP11.39□□□□□ -0.59
PHGDH-222ENST00000641587 FGFR1P11362 822 aa11.39□□□□□ -0.59
PHGDH-222ENST00000641587 KLRC1P26715 233 aa11.39□□□□□ -0.59
PHGDH-222ENST00000641587 SMARCA1P28370 1054 aa11.39□□□□□ -0.59
PHGDH-222ENST00000641587 PBX3P40426 434 aa11.39□□□□□ -0.59
PHGDH-222ENST00000641587 GNAQP50148 359 aa11.39□□□□□ -0.59
PHGDH-222ENST00000641587 STAT5BP51692 787 aa11.39□□□□□ -0.59
PHGDH-222ENST00000641587 DUSP6Q16828 381 aa11.39□□□□□ -0.59
PHGDH-222ENST00000641587 PLPP4Q5VZY2 271 aa11.39□□□□□ -0.59
PHGDH-222ENST00000641587 WWC2Q6AWC2 1192 aa11.39□□□□□ -0.59
PHGDH-222ENST00000641587 TMTC3Q6ZXV5 915 aa11.39□□□□□ -0.59
PHGDH-222ENST00000641587 FBXL6Q8N531 539 aa11.39□□□□□ -0.59
PHGDH-222ENST00000641587 COLGALT1Q8NBJ5 622 aa11.39□□□□□ -0.59
PHGDH-222ENST00000641587 ATP8B4Q8TF62 1192 aa11.39□□□□□ -0.59
PHGDH-222ENST00000641587 SUSD6Q92537 303 aa11.39□□□□□ -0.59
PHGDH-222ENST00000641587 TMEM87BQ96K49 555 aa11.39□□□□□ -0.59
PHGDH-222ENST00000641587 ADAM2Q99965 735 aa11.39□□□□□ -0.59
PHGDH-222ENST00000641587 LZTS2Q9BRK4 669 aa11.39□□□□□ -0.59
PHGDH-222ENST00000641587 LARP6Q9BRS8 491 aaKnown RBP11.39□□□□□ -0.59
PHGDH-222ENST00000641587 TLR9Q9NR96 1032 aa11.39□□□□□ -0.59
PHGDH-222ENST00000641587 TYW1Q9NV66 732 aaKnown RBP11.39□□□□□ -0.59
PHGDH-222ENST00000641587 PCDHB7Q9Y5E2 793 aa11.39□□□□□ -0.59
PHGDH-222ENST00000641587 CNTNAP5Q8WYK1 1306 aa11.38□□□□□ -0.59
PHGDH-222ENST00000641587 PLXNA3P51805 1871 aa11.38□□□□□ -0.59
PHGDH-222ENST00000641587 CACNA1HO95180 2353 aa11.38□□□□□ -0.59
PHGDH-222ENST00000641587 C9IYK1 514 aa11.38□□□□□ -0.59
PHGDH-222ENST00000641587 RPS6KA5O75582 802 aa11.38□□□□□ -0.59
PHGDH-222ENST00000641587 RPLP2P05387 115 aaKnown RBP11.38□□□□□ -0.59
PHGDH-222ENST00000641587 MCM2P49736 904 aa11.38□□□□□ -0.59
PHGDH-222ENST00000641587 EXOSC10Q01780 885 aaKnown RBP11.38□□□□□ -0.59
PHGDH-222ENST00000641587 SIGLEC14Q08ET2 396 aa11.38□□□□□ -0.59
PHGDH-222ENST00000641587 LLGL2Q6P1M3 1020 aa11.38□□□□□ -0.59
PHGDH-222ENST00000641587 PLPPR4Q7Z2D5 763 aa11.38□□□□□ -0.59
PHGDH-222ENST00000641587 TRMT1LQ7Z2T5 733 aaKnown RBP11.38□□□□□ -0.59
PHGDH-222ENST00000641587 FAM228AQ86W67 206 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms