RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 TRIM27P14373 513 aa8.16□□□□□ -1.1
RFC1-217ENST00000639695 PRKCAP17252 672 aa8.16□□□□□ -1.1
RFC1-217ENST00000639695 KRT15P19012 456 aa8.16□□□□□ -1.1
RFC1-217ENST00000639695 PHC1P78364 1004 aa8.16□□□□□ -1.1
RFC1-217ENST00000639695 IRF9Q00978 393 aa8.16□□□□□ -1.1
RFC1-217ENST00000639695 PICALMQ13492 652 aa8.16□□□□□ -1.1
RFC1-217ENST00000639695 RAB3GAP1Q15042 981 aa8.16□□□□□ -1.1
RFC1-217ENST00000639695 TERF2Q15554 542 aa8.16□□□□□ -1.1
RFC1-217ENST00000639695 CLUL1Q15846 466 aa8.16□□□□□ -1.1
RFC1-217ENST00000639695 ARHGAP29Q52LW3 1261 aa8.16□□□□□ -1.1
RFC1-217ENST00000639695 HLA-DQA1Q5Y7H0 255 aa8.16□□□□□ -1.1
RFC1-217ENST00000639695 MBLAC2Q68D91 279 aa8.16□□□□□ -1.1
RFC1-217ENST00000639695 GALNT18Q6P9A2 607 aa8.16□□□□□ -1.1
RFC1-217ENST00000639695 CEP68Q76N32 757 aa8.16□□□□□ -1.1
RFC1-217ENST00000639695 LINC01356Q8N9X3 169 aa8.16□□□□□ -1.1
RFC1-217ENST00000639695 USP33Q8TEY7 942 aa8.16□□□□□ -1.1
RFC1-217ENST00000639695 TNFRSF12AQ9NP84 129 aa8.16□□□□□ -1.1
RFC1-217ENST00000639695 TOMM22Q9NS69 142 aa8.16□□□□□ -1.1
RFC1-217ENST00000639695 BTG4Q9NY30 223 aa8.16□□□□□ -1.1
RFC1-217ENST00000639695 PPARGC1AQ9UBK2 798 aaKnown RBP8.16□□□□□ -1.1
RFC1-217ENST00000639695 TAF6LQ9Y6J9 622 aa8.16□□□□□ -1.1
RFC1-217ENST00000639695 WTIPA6NIX2 430 aaPredicted RBP8.15□□□□□ -1.1
RFC1-217ENST00000639695 TRIM75PA6NK02 468 aa8.15□□□□□ -1.1
RFC1-217ENST00000639695 ZNF561-AS1K7EIQ3 104 aa8.15□□□□□ -1.1
RFC1-217ENST00000639695 FZD9O00144 591 aa8.15□□□□□ -1.1
RFC1-217ENST00000639695 ABLIM1O14639 778 aa8.15□□□□□ -1.1
RFC1-217ENST00000639695 TGM5O43548 720 aa8.15□□□□□ -1.1
RFC1-217ENST00000639695 IFIT2P09913 472 aaKnown RBP8.15□□□□□ -1.1
RFC1-217ENST00000639695 LRRC32Q14392 662 aa8.15□□□□□ -1.1
RFC1-217ENST00000639695 GPR158Q5T848 1215 aa8.15□□□□□ -1.1
RFC1-217ENST00000639695 ARHGAP36Q6ZRI8 547 aa8.15□□□□□ -1.1
RFC1-217ENST00000639695 SP8Q8IXZ3 490 aa8.15□□□□□ -1.1
RFC1-217ENST00000639695 KIAA1958Q8N8K9 716 aa8.15□□□□□ -1.1
RFC1-217ENST00000639695 ZNF610Q8N9Z0 462 aa8.15□□□□□ -1.1
RFC1-217ENST00000639695 TMEM52Q8NDY8 209 aa8.15□□□□□ -1.1
RFC1-217ENST00000639695 TRMT2BQ96GJ1 504 aaKnown RBP8.15□□□□□ -1.1
RFC1-217ENST00000639695 AIFM3Q96NN9 605 aa8.15□□□□□ -1.1
RFC1-217ENST00000639695 JAM3Q9BX67 310 aa8.15□□□□□ -1.1
RFC1-217ENST00000639695 CHST12Q9NRB3 414 aa8.15□□□□□ -1.1
RFC1-217ENST00000639695 ZBTB21Q9ULJ3 1066 aa8.15□□□□□ -1.1
RFC1-217ENST00000639695 PLA2G2DQ9UNK4 145 aa8.15□□□□□ -1.1
RFC1-217ENST00000639695 INVSQ9Y283 1065 aa8.15□□□□□ -1.1
RFC1-217ENST00000639695 FFAR3O14843 346 aa8.14□□□□□ -1.11
RFC1-217ENST00000639695 SLC9A1P19634 815 aa8.14□□□□□ -1.11
RFC1-217ENST00000639695 JAM2P57087 298 aa8.14□□□□□ -1.11
RFC1-217ENST00000639695 ACAP2Q15057 778 aa8.14□□□□□ -1.11
RFC1-217ENST00000639695 CREB3L3Q68CJ9 461 aa8.14□□□□□ -1.11
RFC1-217ENST00000639695 HHIPL2Q6UWX4 724 aa8.14□□□□□ -1.11
RFC1-217ENST00000639695 RPTNQ6XPR3 784 aa8.14□□□□□ -1.11
RFC1-217ENST00000639695 FRMD7Q6ZUT3 714 aa8.14□□□□□ -1.11
RFC1-217ENST00000639695 ZZZ3Q8IYH5 903 aa8.14□□□□□ -1.11
RFC1-217ENST00000639695 CMTR2Q8IYT2 770 aaKnown RBP8.14□□□□□ -1.11
RFC1-217ENST00000639695 TTC17Q96AE7 1141 aa8.14□□□□□ -1.11
RFC1-217ENST00000639695 LRGUKQ96M69 825 aa8.14□□□□□ -1.11
RFC1-217ENST00000639695 TEPSINQ96N21 525 aa8.14□□□□□ -1.11
RFC1-217ENST00000639695 SARGQ9BW04 601 aa8.14□□□□□ -1.11
RFC1-217ENST00000639695 CDIP1Q9H305 208 aa8.14□□□□□ -1.11
RFC1-217ENST00000639695 ACSS2Q9NR19 701 aa8.14□□□□□ -1.11
RFC1-217ENST00000639695 MAN1C1Q9NR34 630 aa8.14□□□□□ -1.11
RFC1-217ENST00000639695 USP25Q9UHP3 1055 aa8.14□□□□□ -1.11
RFC1-217ENST00000639695 KCNG1Q9UIX4 513 aa8.14□□□□□ -1.11
RFC1-217ENST00000639695 COA3Q9Y2R0 106 aaPredicted RBP8.14□□□□□ -1.11
RFC1-217ENST00000639695 PRICKLE3O43900 615 aaPredicted RBP8.13□□□□□ -1.11
RFC1-217ENST00000639695 BUB1BO60566 1050 aaPredicted RBP8.13□□□□□ -1.11
RFC1-217ENST00000639695 DGKIO75912 1065 aa8.13□□□□□ -1.11
RFC1-217ENST00000639695 CYP17A1P05093 508 aa8.13□□□□□ -1.11
RFC1-217ENST00000639695 ZBTB48P10074 688 aaPredicted RBP8.13□□□□□ -1.11
RFC1-217ENST00000639695 HSPA6P17066 643 aa8.13□□□□□ -1.11
RFC1-217ENST00000639695 LIMS1P48059 325 aa8.13□□□□□ -1.11
RFC1-217ENST00000639695 SMAD3P84022 425 aaKnown RBP8.13□□□□□ -1.11
RFC1-217ENST00000639695 CYP4F8P98187 520 aa8.13□□□□□ -1.11
RFC1-217ENST00000639695 SMAD2Q15796 467 aaKnown RBP8.13□□□□□ -1.11
RFC1-217ENST00000639695 OLFML2BQ68BL8 750 aa8.13□□□□□ -1.11
RFC1-217ENST00000639695 TTLL7Q6ZT98 887 aa8.13□□□□□ -1.11
RFC1-217ENST00000639695 NUP43Q8NFH3 380 aa8.13□□□□□ -1.11
RFC1-217ENST00000639695 PJA1Q8NG27 643 aa8.13□□□□□ -1.11
RFC1-217ENST00000639695 SLC39A13Q96H72 371 aa8.13□□□□□ -1.11
RFC1-217ENST00000639695 JMJD8Q96S16 334 aa8.13□□□□□ -1.11
RFC1-217ENST00000639695 ELF4Q99607 663 aaPredicted RBP8.13□□□□□ -1.11
RFC1-217ENST00000639695 ZDHHC5Q9C0B5 715 aa8.13□□□□□ -1.11
RFC1-217ENST00000639695 EPB41L1Q9H4G0 881 aa8.13□□□□□ -1.11
RFC1-217ENST00000639695 SMURF1Q9HCE7 757 aa8.13□□□□□ -1.11
RFC1-217ENST00000639695 TOPORSQ9NS56 1045 aaPredicted RBP8.13□□□□□ -1.11
RFC1-217ENST00000639695 IMPACTQ9P2X3 320 aa8.13□□□□□ -1.11
RFC1-217ENST00000639695 ACSL6Q9UKU0 697 aa8.13□□□□□ -1.11
RFC1-217ENST00000639695 NUB1Q9Y5A7 615 aa8.13□□□□□ -1.11
RFC1-217ENST00000639695 ADRB1P08588 477 aa8.12□□□□□ -1.11
RFC1-217ENST00000639695 MSL3P1P0C860 447 aa8.12□□□□□ -1.11
RFC1-217ENST00000639695 LPOP22079 712 aaPredicted RBP8.12□□□□□ -1.11
RFC1-217ENST00000639695 IGFBP6P24592 240 aaPredicted RBP8.12□□□□□ -1.11
RFC1-217ENST00000639695 KIF11P52732 1056 aa8.12□□□□□ -1.11
RFC1-217ENST00000639695 GBX1Q14549 363 aa8.12□□□□□ -1.11
RFC1-217ENST00000639695 ODF1Q14990 250 aa8.12□□□□□ -1.11
RFC1-217ENST00000639695 ZRSR2Q15696 482 aaKnown RBP8.12□□□□□ -1.11
RFC1-217ENST00000639695 EPM2AIP1Q7L775 607 aaPredicted RBP8.12□□□□□ -1.11
RFC1-217ENST00000639695 NLGN4XQ8N0W4 816 aa8.12□□□□□ -1.11
RFC1-217ENST00000639695 LMBR1Q8WVP7 490 aa8.12□□□□□ -1.11
RFC1-217ENST00000639695 HCFC2Q9Y5Z7 792 aa8.12□□□□□ -1.11
RFC1-217ENST00000639695 IRS2Q9Y4H2 1338 aa8.11□□□□□ -1.11
RFC1-217ENST00000639695 ZC3H12DA2A288 527 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms