RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 UTP15Q8TED0 518 aaKnown RBP4.63□□□□□ -1.67
SCN3A-209ENST00000639244 CCDC138Q96M89 665 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 NUSAP1Q9BXS6 441 aaKnown RBP4.63□□□□□ -1.67
SCN3A-209ENST00000639244 SHCBP1LQ9BZQ2 653 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 GOLPH3LQ9H4A5 285 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 SH2D4AQ9H788 454 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 HMGXB4Q9UGU5 601 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 FHAD1B1AJZ9 1412 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 CCDC7Q96M83 1385 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 KRBA1A5PL33 1030 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 VWA5AO00534 786 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 IKBKBO14920 756 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 POLR2DO15514 142 aaKnown RBP4.63□□□□□ -1.67
SCN3A-209ENST00000639244 NPTXRO95502 500 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 WEE1P30291 646 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 SARSP49591 514 aaKnown RBP4.63□□□□□ -1.67
SCN3A-209ENST00000639244 VBP1P61758 197 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 S100A12P80511 92 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 BLMHQ13867 455 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 COTL1Q14019 142 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 TDRD12Q587J7 1177 aaKnown RBP4.63□□□□□ -1.67
SCN3A-209ENST00000639244 C4orf50Q6ZRC1 276 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 KRT74Q7RTS7 529 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 CCDC25Q86WR0 208 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 PIP4K2CQ8TBX8 421 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 FBXO41Q8TF61 875 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 USP26Q9BXU7 913 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 CCDC177Q9NQR7 707 aaPredicted RBP4.63□□□□□ -1.67
SCN3A-209ENST00000639244 MOCS1Q9NZB8 636 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 PCDHB13Q9Y5F0 798 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 A8MVJ9 347 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 TNFRSF10BO14763 440 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 RIPK2O43353 540 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 F13A1P00488 732 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 CYP2C9P11712 490 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 HCLS1P14317 486 aaPredicted RBP4.63□□□□□ -1.67
SCN3A-209ENST00000639244 RAP1GDS1P52306 607 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 HACE1Q8IYU2 909 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.63□□□□□ -1.67
SCN3A-209ENST00000639244 KAT2BQ92831 832 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 SAP30BPQ9UHR5 308 aaKnown RBP4.63□□□□□ -1.67
SCN3A-209ENST00000639244 KIAA1257Q9ULG3 409 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 ZNF644Q9H582 1327 aaPredicted RBP4.63□□□□□ -1.67
SCN3A-209ENST00000639244 SPDYE2BA6NHP3 402 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 TRDMT1O14717 391 aaKnown RBP4.63□□□□□ -1.67
SCN3A-209ENST00000639244 MAPK13O15264 365 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 GAS8O95995 478 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 IFNA14P01570 189 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 SPDYE6P0CI01 402 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 GLULP15104 373 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 ATF6P18850 670 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 SERPINB6P35237 376 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 ETFBP38117 255 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 SPDYE2Q495Y8 402 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 ZNF574Q6ZN55 896 aaPredicted RBP4.63□□□□□ -1.67
SCN3A-209ENST00000639244 ATG9AQ7Z3C6 839 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 MIER3Q7Z3K6 550 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 ZC3H10Q96K80 434 aaKnown RBP4.63□□□□□ -1.67
SCN3A-209ENST00000639244 USP28Q96RU2 1077 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 GPATCH1Q9BRR8 931 aaKnown RBP4.63□□□□□ -1.67
SCN3A-209ENST00000639244 KRT23Q9C075 422 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 KDM2BQ8NHM5 1336 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 THEGLP0DJG4 465 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 KRT85P78386 507 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 UGP2Q16851 508 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 NEPROQ6NW34 567 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 C17orf53Q8N3J3 647 aaPredicted RBP4.63□□□□□ -1.67
SCN3A-209ENST00000639244 KCT2Q8NC54 265 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 DACT3Q96B18 629 aaPredicted RBP4.63□□□□□ -1.67
SCN3A-209ENST00000639244 PUS3Q9BZE2 481 aaKnown RBP4.63□□□□□ -1.67
SCN3A-209ENST00000639244 INTS2Q9H0H0 1204 aaKnown RBP4.63□□□□□ -1.67
SCN3A-209ENST00000639244 SEC63Q9UGP8 760 aaKnown RBP4.63□□□□□ -1.67
SCN3A-209ENST00000639244 ANGPTL2Q9UKU9 493 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 FAM32AQ9Y421 112 aaKnown RBP4.63□□□□□ -1.67
SCN3A-209ENST00000639244 MYH3P11055 1940 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 ABL1P00519 1130 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 ATP5BP06576 529 aaKnown RBP4.63□□□□□ -1.67
SCN3A-209ENST00000639244 AARSP49588 968 aaKnown RBP eCLIP4.63□□□□□ -1.67
SCN3A-209ENST00000639244 PPP2R2AP63151 447 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 TAGLNQ01995 201 aaKnown RBP4.63□□□□□ -1.67
SCN3A-209ENST00000639244 SKIDA1Q1XH10 827 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 FAM83BQ5T0W9 1011 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 FBF1Q8TES7 1133 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 SHC3Q92529 594 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 RMND1Q9NWS8 449 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 EFCAB8A8MWE9 144 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 STX17P56962 302 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 BPIFB4P59827 614 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 IL31Q6EBC2 164 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 OTUD7BQ6GQQ9 843 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 CNSTQ6PJW8 725 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 LSMEM2Q8N112 164 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 NLRP7Q8WX94 980 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 RMDN1Q96DB5 314 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 TPK1Q9H3S4 243 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 MALT1Q9UDY8 824 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 SNCAIPQ9Y6H5 919 aa4.63□□□□□ -1.67
SCN3A-209ENST00000639244 PLOD3O60568 738 aa4.62□□□□□ -1.67
SCN3A-209ENST00000639244 MTHFD1P11586 935 aaKnown RBP4.62□□□□□ -1.67
SCN3A-209ENST00000639244 ETV1P50549 477 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms