RNA–Protein interactions for RNA: ENST00000638787.1

NECAP1-212, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,067 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-212ENST00000638787 DNAJB3Q8WWF6 145 aa9.93□□□□□ -0.82
NECAP1-212ENST00000638787 NIFKQ9BYG3 293 aaKnown RBP9.93□□□□□ -0.82
NECAP1-212ENST00000638787 RAB34Q9BZG1 259 aa9.93□□□□□ -0.82
NECAP1-212ENST00000638787 FAM49AQ9H0Q0 323 aaPredicted RBP9.93□□□□□ -0.82
NECAP1-212ENST00000638787 PRO3102Q9H379 93 aa9.93□□□□□ -0.82
NECAP1-212ENST00000638787 LRWD1Q9UFC0 647 aa9.93□□□□□ -0.82
NECAP1-212ENST00000638787 CLIC4Q9Y696 253 aa9.93□□□□□ -0.82
NECAP1-212ENST00000638787 SMIM35A0A1B0GVV1 85 aa9.92□□□□□ -0.82
NECAP1-212ENST00000638787 LYPLA2O95372 231 aa9.92□□□□□ -0.82
NECAP1-212ENST00000638787 CTSHP09668 335 aa9.92□□□□□ -0.82
NECAP1-212ENST00000638787 SPATA31C1P0DKV0 1188 aa9.92□□□□□ -0.82
NECAP1-212ENST00000638787 RFC2P35250 354 aa9.92□□□□□ -0.82
NECAP1-212ENST00000638787 EPHB4P54760 987 aa9.92□□□□□ -0.82
NECAP1-212ENST00000638787 TARBP2Q15633 366 aaKnown RBP9.92□□□□□ -0.82
NECAP1-212ENST00000638787 MTERF2Q49AM1 385 aa9.92□□□□□ -0.82
NECAP1-212ENST00000638787 PLA2G4FQ68DD2 849 aa9.92□□□□□ -0.82
NECAP1-212ENST00000638787 TRAF7Q6Q0C0 670 aa9.92□□□□□ -0.82
NECAP1-212ENST00000638787 RSPH3Q86UC2 560 aa9.92□□□□□ -0.82
NECAP1-212ENST00000638787 SH2D3AQ9BRG2 576 aa9.92□□□□□ -0.82
NECAP1-212ENST00000638787 POLR3CQ9BUI4 534 aaPredicted RBP9.92□□□□□ -0.82
NECAP1-212ENST00000638787 TUFT1Q9NNX1 390 aa9.92□□□□□ -0.82
NECAP1-212ENST00000638787 IL23AQ9NPF7 189 aa9.92□□□□□ -0.82
NECAP1-212ENST00000638787 COLQQ9Y215 455 aaPredicted RBP9.92□□□□□ -0.82
NECAP1-212ENST00000638787 VWA3AA6NCI4 1184 aa9.92□□□□□ -0.82
NECAP1-212ENST00000638787 RSPH10B2B2RC85 870 aa9.92□□□□□ -0.82
NECAP1-212ENST00000638787 MAGEB2O15479 319 aa9.92□□□□□ -0.82
NECAP1-212ENST00000638787 MED24O75448 989 aa9.92□□□□□ -0.82
NECAP1-212ENST00000638787 RPLP2P05387 115 aaKnown RBP9.92□□□□□ -0.82
NECAP1-212ENST00000638787 RSPH10BP0C881 870 aa9.92□□□□□ -0.82
NECAP1-212ENST00000638787 YWHABP31946 246 aaKnown RBP9.92□□□□□ -0.82
NECAP1-212ENST00000638787 TBC1D8BQ0IIM8 1120 aa9.92□□□□□ -0.82
NECAP1-212ENST00000638787 PTPAQ15257 358 aa9.92□□□□□ -0.82
NECAP1-212ENST00000638787 HAUS3Q68CZ6 603 aa9.92□□□□□ -0.82
NECAP1-212ENST00000638787 DEFB128Q7Z7B8 93 aa9.92□□□□□ -0.82
NECAP1-212ENST00000638787 CATSPER3Q86XQ3 398 aa9.92□□□□□ -0.82
NECAP1-212ENST00000638787 USP28Q96RU2 1077 aa9.92□□□□□ -0.82
NECAP1-212ENST00000638787 CEP89Q96ST8 783 aa9.92□□□□□ -0.82
NECAP1-212ENST00000638787 STK24Q9Y6E0 443 aa9.92□□□□□ -0.82
NECAP1-212ENST00000638787 ARID2Q68CP9 1835 aa9.92□□□□□ -0.82
NECAP1-212ENST00000638787 TET1Q8NFU7 2136 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 SIP14410 1827 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 PP2D1A8MPX8 630 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 ZBTB39O15060 712 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 PARNO95453 639 aaKnown RBP9.91□□□□□ -0.82
NECAP1-212ENST00000638787 ACRP10323 421 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 RPA1P27694 616 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 CCT6AP40227 531 aaKnown RBP9.91□□□□□ -0.82
NECAP1-212ENST00000638787 NPEPPSP55786 919 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 CEBPZQ03701 1054 aaKnown RBP9.91□□□□□ -0.82
NECAP1-212ENST00000638787 MBTPS1Q14703 1052 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 POTEGQ6S5H5 508 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 C16orf59Q7L2K0 433 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 OTUD6AQ7L8S5 288 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 KIAA0319LQ8IZA0 1049 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 METTL13Q8N6R0 699 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 LINC01465Q8N7H1 131 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 ZNF579Q8NAF0 562 aaKnown RBP9.91□□□□□ -0.82
NECAP1-212ENST00000638787 SNX29Q8TEQ0 813 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 VWCEQ96DN2 955 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 ZNF396Q96N95 335 aaPredicted RBP9.91□□□□□ -0.82
NECAP1-212ENST00000638787 CYP26B1Q9NR63 512 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 RANBP2P49792 3224 aaKnown RBP9.91□□□□□ -0.82
NECAP1-212ENST00000638787 NBNO60934 754 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 BRD1O95696 1058 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 MUTP22033 750 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 CDC25AP30304 524 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 CLCN3P51790 818 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 MRPS6P82932 125 aaKnown RBP9.91□□□□□ -0.82
NECAP1-212ENST00000638787 MGAT3Q09327 533 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 GPNMBQ14956 572 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 XKR9Q5GH70 373 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 FAM26DQ5JW98 314 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 TMEM240Q5SV17 173 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 KRT79Q5XKE5 535 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 EFCAB12Q6NXP0 572 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 PSRC1Q6PGN9 363 aaPredicted RBP9.91□□□□□ -0.82
NECAP1-212ENST00000638787 RPUSD2Q8IZ73 545 aaKnown RBP9.91□□□□□ -0.82
NECAP1-212ENST00000638787 NME8Q8N427 588 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 LRRC71Q8N4P6 559 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 PIGOQ8TEQ8 1089 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 CEP170P1Q96L14 293 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.91□□□□□ -0.82
NECAP1-212ENST00000638787 ANKEF1Q9NU02 776 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 ZDHHC9Q9Y397 364 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 PPME1Q9Y570 386 aa9.91□□□□□ -0.82
NECAP1-212ENST00000638787 IGKV6-21A0A0C4DH24 114 aa9.9□□□□□ -0.82
NECAP1-212ENST00000638787 MAFO75444 373 aaPredicted RBP9.9□□□□□ -0.82
NECAP1-212ENST00000638787 CHRNA1P02708 482 aa9.9□□□□□ -0.82
NECAP1-212ENST00000638787 CXCL10P02778 98 aa9.9□□□□□ -0.82
NECAP1-212ENST00000638787 PFKMP08237 780 aa9.9□□□□□ -0.82
NECAP1-212ENST00000638787 TMOD1P28289 359 aa9.9□□□□□ -0.82
NECAP1-212ENST00000638787 MARCKSP29966 332 aaPredicted RBP9.9□□□□□ -0.82
NECAP1-212ENST00000638787 NASPP49321 788 aaPredicted RBP9.9□□□□□ -0.82
NECAP1-212ENST00000638787 GRIN1Q05586 938 aa9.9□□□□□ -0.82
NECAP1-212ENST00000638787 TMEM62Q0P6H9 643 aa9.9□□□□□ -0.82
NECAP1-212ENST00000638787 ECM1Q16610 540 aa9.9□□□□□ -0.82
NECAP1-212ENST00000638787 FOXD4L6Q3SYB3 417 aaPredicted RBP9.9□□□□□ -0.82
NECAP1-212ENST00000638787 C9orf50Q5SZB4 431 aa9.9□□□□□ -0.82
NECAP1-212ENST00000638787 FOXD4L3Q6VB84 417 aaPredicted RBP9.9□□□□□ -0.82
NECAP1-212ENST00000638787 ZNF365Q70YC5 407 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms