RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, human

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-238	ENST00000638755	NARS	O43776	548 aa	Known RBP	13.54	□□□□□ -0.24
PAX6-238	ENST00000638755	CLASP2	O75122	1294 aa	Known RBP	13.54	□□□□□ -0.24
PAX6-238	ENST00000638755	CFH	P08603	1231 aa		13.54	□□□□□ -0.24
PAX6-238	ENST00000638755	MS4A1	P11836	297 aa		13.54	□□□□□ -0.24
PAX6-238	ENST00000638755	SMC1A	Q14683	1233 aa	Known RBP	13.54	□□□□□ -0.24
PAX6-238	ENST00000638755	XRRA1	Q6P2D8	792 aa		13.54	□□□□□ -0.24
PAX6-238	ENST00000638755	TBC1D10C	Q8IV04	446 aa		13.54	□□□□□ -0.24
PAX6-238	ENST00000638755	MRPL43	Q8N983	215 aa	Known RBP	13.54	□□□□□ -0.24
PAX6-238	ENST00000638755	FEZF2	Q8TBJ5	459 aa		13.54	□□□□□ -0.24
PAX6-238	ENST00000638755	PI4K2B	Q8TCG2	481 aa		13.54	□□□□□ -0.24
PAX6-238	ENST00000638755	ESR2	Q92731	530 aa		13.54	□□□□□ -0.24
PAX6-238	ENST00000638755	ADAM2	Q99965	735 aa		13.54	□□□□□ -0.24
PAX6-238	ENST00000638755	KCNK12	Q9HB15	430 aa		13.54	□□□□□ -0.24
PAX6-238	ENST00000638755	ERAP1	Q9NZ08	941 aa		13.54	□□□□□ -0.24
PAX6-238	ENST00000638755	GINS2	Q9Y248	185 aa		13.54	□□□□□ -0.24
PAX6-238	ENST00000638755	NEDD4	P46934	1319 aa		13.54	□□□□□ -0.24
PAX6-238	ENST00000638755	ZBTB5	O15062	677 aa		13.53	□□□□□ -0.24
PAX6-238	ENST00000638755	STAM2	O75886	525 aa		13.53	□□□□□ -0.24
PAX6-238	ENST00000638755	RPLP2	P05387	115 aa	Known RBP	13.53	□□□□□ -0.24
PAX6-238	ENST00000638755	DCN	P07585	359 aa	Known RBP	13.53	□□□□□ -0.24
PAX6-238	ENST00000638755	INSRR	P14616	1297 aa		13.53	□□□□□ -0.24
PAX6-238	ENST00000638755	SDHB	P21912	280 aa		13.53	□□□□□ -0.24
PAX6-238	ENST00000638755	KCNT2	Q6UVM3	1135 aa		13.53	□□□□□ -0.24
PAX6-238	ENST00000638755	TMC5	Q6UXY8	1006 aa		13.53	□□□□□ -0.24
PAX6-238	ENST00000638755	SLC24A5	Q71RS6	500 aa		13.53	□□□□□ -0.24
PAX6-238	ENST00000638755	STAG2	Q8N3U4	1231 aa		13.53	□□□□□ -0.24
PAX6-238	ENST00000638755	SAMD3	Q8N6K7	520 aa		13.53	□□□□□ -0.24
PAX6-238	ENST00000638755	SUMF1	Q8NBK3	374 aa		13.53	□□□□□ -0.24
PAX6-238	ENST00000638755	NCDN	Q9UBB6	729 aa		13.53	□□□□□ -0.24
PAX6-238	ENST00000638755	TTC41P	Q6P2S7	1318 aa		13.53	□□□□□ -0.24
PAX6-238	ENST00000638755	KRBA1	A5PL33	1030 aa		13.52	□□□□□ -0.25
PAX6-238	ENST00000638755	KRT76	Q01546	638 aa		13.52	□□□□□ -0.25
PAX6-238	ENST00000638755	TBC1D8B	Q0IIM8	1120 aa		13.52	□□□□□ -0.25
PAX6-238	ENST00000638755	LRRC55	Q6ZSA7	311 aa		13.52	□□□□□ -0.25
PAX6-238	ENST00000638755	OTOP3	Q7RTS5	596 aa		13.52	□□□□□ -0.25
PAX6-238	ENST00000638755	IQCA1	Q86XH1	822 aa		13.52	□□□□□ -0.25
PAX6-238	ENST00000638755	HOMER1	Q86YM7	354 aa		13.52	□□□□□ -0.25
PAX6-238	ENST00000638755	TMEM87A	Q8NBN3	555 aa		13.52	□□□□□ -0.25
PAX6-238	ENST00000638755	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.52	□□□□□ -0.25
PAX6-238	ENST00000638755	TRAPPC12	Q8WVT3	735 aa		13.52	□□□□□ -0.25
PAX6-238	ENST00000638755	ZNF558	Q96NG5	402 aa		13.52	□□□□□ -0.25
PAX6-238	ENST00000638755	TBC1D17	Q9HA65	648 aa		13.52	□□□□□ -0.25
PAX6-238	ENST00000638755	ATP6V0A4	Q9HBG4	840 aa		13.52	□□□□□ -0.25
PAX6-238	ENST00000638755	RGS18	Q9NS28	235 aa		13.52	□□□□□ -0.25
PAX6-238	ENST00000638755	C1orf112	Q9NSG2	853 aa		13.52	□□□□□ -0.25
PAX6-238	ENST00000638755	SPG21	Q9NZD8	308 aa		13.52	□□□□□ -0.25
PAX6-238	ENST00000638755	CDV3	Q9UKY7	258 aa	Known RBP	13.52	□□□□□ -0.25
PAX6-238	ENST00000638755	CA14	Q9ULX7	337 aa		13.52	□□□□□ -0.25
PAX6-238	ENST00000638755	GSTTP1	A0A1W2PQM5	241 aa		13.51	□□□□□ -0.25
PAX6-238	ENST00000638755	RRN3P2	A6NIE6	340 aa		13.51	□□□□□ -0.25
PAX6-238	ENST00000638755		C9IYK1	514 aa		13.51	□□□□□ -0.25
PAX6-238	ENST00000638755	KLRF2	D3W0D1	207 aa		13.51	□□□□□ -0.25
PAX6-238	ENST00000638755	KIN	O60870	393 aa	Known RBP	13.51	□□□□□ -0.25
PAX6-238	ENST00000638755	CXCL14	O95715	111 aa		13.51	□□□□□ -0.25
PAX6-238	ENST00000638755	PC	P11498	1178 aa	Known RBP	13.51	□□□□□ -0.25
PAX6-238	ENST00000638755	EPCAM	P16422	314 aa		13.51	□□□□□ -0.25
PAX6-238	ENST00000638755	PPM1A	P35813	382 aa		13.51	□□□□□ -0.25
PAX6-238	ENST00000638755	VARS2	Q5ST30	1063 aa	Known RBP	13.51	□□□□□ -0.25
PAX6-238	ENST00000638755	C1orf210	Q8IVY1	113 aa		13.51	□□□□□ -0.25
PAX6-238	ENST00000638755	RSAD2	Q8WXG1	361 aa		13.51	□□□□□ -0.25
PAX6-238	ENST00000638755	SEPT1	Q8WYJ6	367 aa		13.51	□□□□□ -0.25
PAX6-238	ENST00000638755	SENP7	Q9BQF6	1050 aa		13.51	□□□□□ -0.25
PAX6-238	ENST00000638755	CHMP4B	Q9H444	224 aa	Known RBP	13.51	□□□□□ -0.25
PAX6-238	ENST00000638755	SMARCAD1	Q9H4L7	1026 aa		13.51	□□□□□ -0.25
PAX6-238	ENST00000638755	RNF41	Q9H4P4	317 aa	Predicted RBP	13.51	□□□□□ -0.25
PAX6-238	ENST00000638755	DZANK1	Q9NVP4	752 aa		13.51	□□□□□ -0.25
PAX6-238	ENST00000638755	WNT16	Q9UBV4	365 aa		13.51	□□□□□ -0.25
PAX6-238	ENST00000638755	NOC2L	Q9Y3T9	749 aa	Known RBP	13.51	□□□□□ -0.25
PAX6-238	ENST00000638755	CACNA1I	Q9P0X4	2223 aa		13.51	□□□□□ -0.25
PAX6-238	ENST00000638755	FANCM	Q8IYD8	2048 aa		13.51	□□□□□ -0.25
PAX6-238	ENST00000638755	SPDYE4	A6NLX3	237 aa		13.5	□□□□□ -0.25
PAX6-238	ENST00000638755	RPS6KA5	O75582	802 aa		13.5	□□□□□ -0.25
PAX6-238	ENST00000638755	CCDC178	Q5BJE1	867 aa		13.5	□□□□□ -0.25
PAX6-238	ENST00000638755	CCDC149	Q6ZUS6	474 aa		13.5	□□□□□ -0.25
PAX6-238	ENST00000638755	CABP7	Q86V35	215 aa		13.5	□□□□□ -0.25
PAX6-238	ENST00000638755	ENAH	Q8N8S7	591 aa	Predicted RBP	13.5	□□□□□ -0.25
PAX6-238	ENST00000638755	GIMAP8	Q8ND71	665 aa	Predicted RBP	13.5	□□□□□ -0.25
PAX6-238	ENST00000638755	AUTS2	Q8WXX7	1259 aa		13.5	□□□□□ -0.25
PAX6-238	ENST00000638755	FAM227B	Q96M60	508 aa		13.5	□□□□□ -0.25
PAX6-238	ENST00000638755	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.5	□□□□□ -0.25
PAX6-238	ENST00000638755	CDHR5	Q9HBB8	845 aa		13.5	□□□□□ -0.25
PAX6-238	ENST00000638755	HELLS	Q9NRZ9	838 aa		13.5	□□□□□ -0.25
PAX6-238	ENST00000638755	TMEM161A	Q9NX61	479 aa		13.5	□□□□□ -0.25
PAX6-238	ENST00000638755	PKD2L1	Q9P0L9	805 aa		13.5	□□□□□ -0.25
PAX6-238	ENST00000638755	ST3GAL5	Q9UNP4	418 aa		13.5	□□□□□ -0.25
PAX6-238	ENST00000638755	PCDHA2	Q9Y5H9	948 aa		13.5	□□□□□ -0.25
PAX6-238	ENST00000638755	KDM3A	Q9Y4C1	1321 aa		13.49	□□□□□ -0.25
PAX6-238	ENST00000638755		A0A0D9SFI3	127 aa		13.49	□□□□□ -0.25
PAX6-238	ENST00000638755	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.49	□□□□□ -0.25
PAX6-238	ENST00000638755	ATP9A	O75110	1047 aa		13.49	□□□□□ -0.25
PAX6-238	ENST00000638755	ADRB1	P08588	477 aa		13.49	□□□□□ -0.25
PAX6-238	ENST00000638755	BMS1	Q14692	1282 aa	Known RBP	13.49	□□□□□ -0.25
PAX6-238	ENST00000638755	NLRX1	Q86UT6	975 aa		13.49	□□□□□ -0.25
PAX6-238	ENST00000638755	TMEM40	Q8WWA1	233 aa		13.49	□□□□□ -0.25
PAX6-238	ENST00000638755	MTMR8	Q96EF0	704 aa		13.49	□□□□□ -0.25
PAX6-238	ENST00000638755	CASD1	Q96PB1	797 aa		13.49	□□□□□ -0.25
PAX6-238	ENST00000638755	PIGS	Q96S52	555 aa		13.49	□□□□□ -0.25
PAX6-238	ENST00000638755	TMEM117	Q9H0C3	514 aa		13.49	□□□□□ -0.25
PAX6-238	ENST00000638755	DCTPP1	Q9H773	170 aa		13.49	□□□□□ -0.25
PAX6-238	ENST00000638755	IGSF9	Q9P2J2	1179 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms