RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 VPS52Q8N1B4 723 aa15.51■□□□□ 0.07
SCARB2-208ENST00000638372 STK38LQ9Y2H1 464 aa15.51■□□□□ 0.07
SCARB2-208ENST00000638372 CAPN7Q9Y6W3 813 aa15.51■□□□□ 0.07
SCARB2-208ENST00000638372 JCADQ9P266 1359 aa15.51■□□□□ 0.07
SCARB2-208ENST00000638372 E4F1Q66K89 784 aaPredicted RBP15.51■□□□□ 0.07
SCARB2-208ENST00000638372 RFX6Q8HWS3 928 aa15.51■□□□□ 0.07
SCARB2-208ENST00000638372 ATP2A3Q93084 1043 aa15.51■□□□□ 0.07
SCARB2-208ENST00000638372 TRIM11Q96F44 468 aa15.51■□□□□ 0.07
SCARB2-208ENST00000638372 RUNDC3BQ96NL0 473 aa15.51■□□□□ 0.07
SCARB2-208ENST00000638372 FAM49AQ9H0Q0 323 aaPredicted RBP15.51■□□□□ 0.07
SCARB2-208ENST00000638372 MRPL47Q9HD33 250 aaKnown RBP15.51■□□□□ 0.07
SCARB2-208ENST00000638372 INTS9Q9NV88 658 aaKnown RBP15.51■□□□□ 0.07
SCARB2-208ENST00000638372 KLHL14Q9P2G3 628 aa15.51■□□□□ 0.07
SCARB2-208ENST00000638372 TUBE1Q9UJT0 475 aa15.51■□□□□ 0.07
SCARB2-208ENST00000638372 ODF2LQ9ULJ1 636 aa15.51■□□□□ 0.07
SCARB2-208ENST00000638372 NPHP3-ACAD11A0A0J9YXS1 232 aa15.5■□□□□ 0.07
SCARB2-208ENST00000638372 DENND3A2RUS2 1198 aa15.5■□□□□ 0.07
SCARB2-208ENST00000638372 NCK2O43639 380 aa15.5■□□□□ 0.07
SCARB2-208ENST00000638372 APBA1Q02410 837 aa15.5■□□□□ 0.07
SCARB2-208ENST00000638372 NSMCE1Q8WV22 266 aa15.5■□□□□ 0.07
SCARB2-208ENST00000638372 RPS6KC1Q96S38 1066 aa15.5■□□□□ 0.07
SCARB2-208ENST00000638372 TBC1D22BQ9NU19 505 aa15.5■□□□□ 0.07
SCARB2-208ENST00000638372 PDHBP11177 359 aa15.5■□□□□ 0.07
SCARB2-208ENST00000638372 HOXA7P31268 230 aaPredicted RBP15.5■□□□□ 0.07
SCARB2-208ENST00000638372 SARNPP82979 210 aaKnown RBP15.5■□□□□ 0.07
SCARB2-208ENST00000638372 ALCAMQ13740 583 aa15.5■□□□□ 0.07
SCARB2-208ENST00000638372 CEP55Q53EZ4 464 aa15.5■□□□□ 0.07
SCARB2-208ENST00000638372 NSUN6Q8TEA1 469 aaKnown RBP15.5■□□□□ 0.07
SCARB2-208ENST00000638372 FAM213AQ9BRX8 229 aa15.5■□□□□ 0.07
SCARB2-208ENST00000638372 HERC5Q9UII4 1024 aaKnown RBP15.5■□□□□ 0.07
SCARB2-208ENST00000638372 P4HBP07237 508 aaKnown RBP15.5■□□□□ 0.07
SCARB2-208ENST00000638372 SWSAP1Q6NVH7 229 aa15.5■□□□□ 0.07
SCARB2-208ENST00000638372 CNTNAP5Q8WYK1 1306 aa15.5■□□□□ 0.07
SCARB2-208ENST00000638372 HAUS1Q96CS2 278 aa15.5■□□□□ 0.07
SCARB2-208ENST00000638372 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.5■□□□□ 0.07
SCARB2-208ENST00000638372 GABBR1Q9UBS5 961 aa15.5■□□□□ 0.07
SCARB2-208ENST00000638372 USP32Q8NFA0 1604 aa15.5■□□□□ 0.07
SCARB2-208ENST00000638372 KRT1P04264 644 aa15.5■□□□□ 0.07
SCARB2-208ENST00000638372 FXR1P51114 621 aaKnown RBP eCLIP15.5■□□□□ 0.07
SCARB2-208ENST00000638372 ORC2Q13416 577 aaPredicted RBP15.5■□□□□ 0.07
SCARB2-208ENST00000638372 KCNB1Q14721 858 aa15.5■□□□□ 0.07
SCARB2-208ENST00000638372 NFRKBQ6P4R8 1299 aa15.5■□□□□ 0.07
SCARB2-208ENST00000638372 ENGASEQ8NFI3 743 aa15.5■□□□□ 0.07
SCARB2-208ENST00000638372 TBK1Q9UHD2 729 aa15.5■□□□□ 0.07
SCARB2-208ENST00000638372 PACSIN2Q9UNF0 486 aaPredicted RBP15.5■□□□□ 0.07
SCARB2-208ENST00000638372 SUGT1Q9Y2Z0 365 aa15.5■□□□□ 0.07
SCARB2-208ENST00000638372 A6NJR5 290 aa15.49■□□□□ 0.07
SCARB2-208ENST00000638372 CRCPO75575 148 aa15.49■□□□□ 0.07
SCARB2-208ENST00000638372 JAK3P52333 1124 aa15.49■□□□□ 0.07
SCARB2-208ENST00000638372 SLC12A2P55011 1212 aa15.49■□□□□ 0.07
SCARB2-208ENST00000638372 GABPAQ06546 454 aa15.49■□□□□ 0.07
SCARB2-208ENST00000638372 DPYDQ12882 1025 aa15.49■□□□□ 0.07
SCARB2-208ENST00000638372 ZKSCAN8Q15776 578 aaPredicted RBP15.49■□□□□ 0.07
SCARB2-208ENST00000638372 STXBP2Q15833 593 aa15.49■□□□□ 0.07
SCARB2-208ENST00000638372 TXNRD3Q86VQ6 643 aa15.49■□□□□ 0.07
SCARB2-208ENST00000638372 PLCD3Q8N3E9 789 aa15.49■□□□□ 0.07
SCARB2-208ENST00000638372 MCPH1Q8NEM0 835 aa15.49■□□□□ 0.07
SCARB2-208ENST00000638372 ZNF526Q8TF50 670 aaPredicted RBP15.49■□□□□ 0.07
SCARB2-208ENST00000638372 SAAL1Q96ER3 474 aa15.49■□□□□ 0.07
SCARB2-208ENST00000638372 PALM3A6NDB9 673 aaPredicted RBP15.49■□□□□ 0.07
SCARB2-208ENST00000638372 NMT1P30419 496 aaKnown RBP15.49■□□□□ 0.07
SCARB2-208ENST00000638372 STRIP1Q5VSL9 837 aa15.49■□□□□ 0.07
SCARB2-208ENST00000638372 ARMC9Q7Z3E5 817 aa15.49■□□□□ 0.07
SCARB2-208ENST00000638372 GSPT2Q8IYD1 628 aaKnown RBP15.49■□□□□ 0.07
SCARB2-208ENST00000638372 PREX1Q8TCU6 1659 aa15.49■□□□□ 0.07
SCARB2-208ENST00000638372 SPATA31A5Q5VU36 1347 aa15.49■□□□□ 0.07
SCARB2-208ENST00000638372 SPATA31A7Q8IWB4 1347 aa15.49■□□□□ 0.07
SCARB2-208ENST00000638372 ESYT3A0FGR9 886 aa15.49■□□□□ 0.07
SCARB2-208ENST00000638372 CLDN3O15551 220 aa15.49■□□□□ 0.07
SCARB2-208ENST00000638372 CIB2O75838 187 aa15.49■□□□□ 0.07
SCARB2-208ENST00000638372 SAT1P21673 171 aa15.49■□□□□ 0.07
SCARB2-208ENST00000638372 CCZ1BP86790 482 aa15.49■□□□□ 0.07
SCARB2-208ENST00000638372 CCZ1P86791 482 aaPredicted RBP15.49■□□□□ 0.07
SCARB2-208ENST00000638372 NAALADL2Q58DX5 795 aa15.49■□□□□ 0.07
SCARB2-208ENST00000638372 SPOUT1Q5T280 376 aaKnown RBP15.49■□□□□ 0.07
SCARB2-208ENST00000638372 ADSSL1Q8N142 457 aa15.49■□□□□ 0.07
SCARB2-208ENST00000638372 BBOF1Q8ND07 529 aa15.49■□□□□ 0.07
SCARB2-208ENST00000638372 SLC10A4Q96EP9 437 aa15.49■□□□□ 0.07
SCARB2-208ENST00000638372 FMO2Q99518 471 aa15.49■□□□□ 0.07
SCARB2-208ENST00000638372 HOXC10Q9NYD6 342 aa15.49■□□□□ 0.07
SCARB2-208ENST00000638372 COL3A1P02461 1466 aaPredicted RBP15.49■□□□□ 0.07
SCARB2-208ENST00000638372 KRT76Q01546 638 aa15.49■□□□□ 0.07
SCARB2-208ENST00000638372 NNTQ13423 1086 aa15.49■□□□□ 0.07
SCARB2-208ENST00000638372 PASD1Q8IV76 773 aa15.49■□□□□ 0.07
SCARB2-208ENST00000638372 FRMPD1Q5SYB0 1578 aa15.48■□□□□ 0.07
SCARB2-208ENST00000638372 TROVE2P10155 538 aaKnown RBP eCLIP15.48■□□□□ 0.07
SCARB2-208ENST00000638372 PDIA5Q14554 519 aa15.48■□□□□ 0.07
SCARB2-208ENST00000638372 DRAP1Q14919 205 aaPredicted RBP15.48■□□□□ 0.07
SCARB2-208ENST00000638372 NAA25Q14CX7 972 aa15.48■□□□□ 0.07
SCARB2-208ENST00000638372 OR6B2Q6IFH4 312 aa15.48■□□□□ 0.07
SCARB2-208ENST00000638372 C16orf86Q6ZW13 317 aa15.48■□□□□ 0.07
SCARB2-208ENST00000638372 ANAPC7Q9UJX3 599 aa15.48■□□□□ 0.07
SCARB2-208ENST00000638372 STXBP3O00186 592 aa15.48■□□□□ 0.07
SCARB2-208ENST00000638372 DR1Q01658 176 aa15.48■□□□□ 0.07
SCARB2-208ENST00000638372 CCT6BQ92526 530 aa15.48■□□□□ 0.07
SCARB2-208ENST00000638372 KCNB2Q92953 911 aa15.48■□□□□ 0.07
SCARB2-208ENST00000638372 ANAPC5Q9UJX4 755 aa15.48■□□□□ 0.07
SCARB2-208ENST00000638372 A0A1B0GTH6 734 aa15.48■□□□□ 0.07
SCARB2-208ENST00000638372 GBP1P32455 592 aa15.48■□□□□ 0.07
SCARB2-208ENST00000638372 GABPB2Q8TAK5 448 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms