RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 LTBP1Q14766 1721 aa4.96□□□□□ -1.62
GABRA1-220ENST00000638159 SFI1A8K8P3 1242 aa4.96□□□□□ -1.62
GABRA1-220ENST00000638159 EIF3JO75822 258 aaKnown RBP4.96□□□□□ -1.62
GABRA1-220ENST00000638159 MMP1P03956 469 aa4.96□□□□□ -1.62
GABRA1-220ENST00000638159 SEMG2Q02383 582 aa4.96□□□□□ -1.62
GABRA1-220ENST00000638159 STARD3Q14849 445 aa4.96□□□□□ -1.62
GABRA1-220ENST00000638159 GPATCH4Q5T3I0 446 aaKnown RBP4.96□□□□□ -1.62
GABRA1-220ENST00000638159 ERICH6BQ5W0A0 696 aa4.96□□□□□ -1.62
GABRA1-220ENST00000638159 DNERQ8NFT8 737 aa4.96□□□□□ -1.62
GABRA1-220ENST00000638159 NXPE2Q96DL1 559 aa4.96□□□□□ -1.62
GABRA1-220ENST00000638159 IGSF5Q9NSI5 407 aa4.96□□□□□ -1.62
GABRA1-220ENST00000638159 LY75O60449 1722 aa4.96□□□□□ -1.62
GABRA1-220ENST00000638159 DUOX1Q9NRD9 1551 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 IPO5O00410 1097 aaKnown RBP4.95□□□□□ -1.62
GABRA1-220ENST00000638159 ZNF862O60290 1169 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 NDUFB10O96000 172 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 ZFYP08048 801 aaPredicted RBP4.95□□□□□ -1.62
GABRA1-220ENST00000638159 ZNF865P0CJ78 1059 aaPredicted RBP4.95□□□□□ -1.62
GABRA1-220ENST00000638159 CDK8P49336 464 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 RHBDL3P58872 404 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 C1QBPQ07021 282 aaKnown RBP4.95□□□□□ -1.62
GABRA1-220ENST00000638159 TFCP2Q12800 502 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 SNW1Q13573 536 aaKnown RBP4.95□□□□□ -1.62
GABRA1-220ENST00000638159 BEND3Q5T5X7 828 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 GPR155Q7Z3F1 870 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 ZDHHC14Q8IZN3 488 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 DEFB124Q8NES8 71 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 LEO1Q8WVC0 666 aaPredicted RBP4.95□□□□□ -1.62
GABRA1-220ENST00000638159 FAM167AQ96KS9 214 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 NUP88Q99567 741 aaPredicted RBP4.95□□□□□ -1.62
GABRA1-220ENST00000638159 PRDM16Q9HAZ2 1276 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 FLRT1Q9NZU1 646 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 PARP1P09874 1014 aaKnown RBP4.95□□□□□ -1.62
GABRA1-220ENST00000638159 WEE2P0C1S8 567 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 TFAP4Q01664 338 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 MTERF2Q49AM1 385 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 SLC44A4Q53GD3 710 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 N4BP2L1Q5TBK1 243 aaPredicted RBP4.95□□□□□ -1.62
GABRA1-220ENST00000638159 FOXR1Q6PIV2 292 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 RSPO2Q6UXX9 243 aaPredicted RBP4.95□□□□□ -1.62
GABRA1-220ENST00000638159 KLHDC9Q8NEP7 349 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 PIBF1Q8WXW3 757 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 HPS3Q969F9 1004 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 E2F7Q96AV8 911 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 IWS1Q96ST2 819 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 PHOX2BQ99453 314 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 C8orf33Q9H7E9 229 aaPredicted RBP4.95□□□□□ -1.62
GABRA1-220ENST00000638159 SCN7AQ01118 1682 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 FAM205CA6NFA0 338 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 URB1O60287 2271 aaKnown RBP4.95□□□□□ -1.62
GABRA1-220ENST00000638159 PTPRCP08575 1304 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 ACTN2P35609 894 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 DYNLL1P63167 89 aaKnown RBP4.95□□□□□ -1.62
GABRA1-220ENST00000638159 CNTN2Q02246 1040 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 ZNF792Q3KQV3 632 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 WDR45BQ5MNZ6 344 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 PDXDC2PQ6P474 469 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 ATG14Q6ZNE5 492 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 LONP2Q86WA8 852 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 ESR2Q92731 530 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 CCDC97Q96F63 343 aaPredicted RBP4.95□□□□□ -1.62
GABRA1-220ENST00000638159 DLL3Q9NYJ7 618 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 NYAP2Q9P242 653 aa4.95□□□□□ -1.62
GABRA1-220ENST00000638159 SRGAP2CP0DJJ0 459 aa4.94□□□□□ -1.62
GABRA1-220ENST00000638159 CFHR1Q03591 330 aa4.94□□□□□ -1.62
GABRA1-220ENST00000638159 DDX10Q13206 875 aaKnown RBP4.94□□□□□ -1.62
GABRA1-220ENST00000638159 MYSM1Q5VVJ2 828 aa4.94□□□□□ -1.62
GABRA1-220ENST00000638159 RCSD1Q6JBY9 416 aa4.94□□□□□ -1.62
GABRA1-220ENST00000638159 CASC1Q6TDU7 716 aa4.94□□□□□ -1.62
GABRA1-220ENST00000638159 KCNT2Q6UVM3 1135 aa4.94□□□□□ -1.62
GABRA1-220ENST00000638159 USP53Q70EK8 1073 aa4.94□□□□□ -1.62
GABRA1-220ENST00000638159 PALB2Q86YC2 1186 aa4.94□□□□□ -1.62
GABRA1-220ENST00000638159 RPAP2Q8IXW5 612 aaPredicted RBP4.94□□□□□ -1.62
GABRA1-220ENST00000638159 C12orf76Q8N812 135 aaPredicted RBP4.94□□□□□ -1.62
GABRA1-220ENST00000638159 CNNM3Q8NE01 707 aa4.94□□□□□ -1.62
GABRA1-220ENST00000638159 TRPV1Q8NER1 839 aa4.94□□□□□ -1.62
GABRA1-220ENST00000638159 KLHDC4Q8TBB5 520 aa4.94□□□□□ -1.62
GABRA1-220ENST00000638159 PI4K2BQ8TCG2 481 aa4.94□□□□□ -1.62
GABRA1-220ENST00000638159 FAM3CQ92520 227 aa4.94□□□□□ -1.62
GABRA1-220ENST00000638159 GPKOWQ92917 476 aaPredicted RBP eCLIP4.94□□□□□ -1.62
GABRA1-220ENST00000638159 ADAMTS10Q9H324 1103 aa4.94□□□□□ -1.62
GABRA1-220ENST00000638159 PLEKHA4Q9H4M7 779 aa4.94□□□□□ -1.62
GABRA1-220ENST00000638159 ARMT1Q9H993 441 aa4.94□□□□□ -1.62
GABRA1-220ENST00000638159 SETD4Q9NVD3 440 aa4.94□□□□□ -1.62
GABRA1-220ENST00000638159 TPCN1Q9ULQ1 816 aa4.94□□□□□ -1.62
GABRA1-220ENST00000638159 ADAMTS8Q9UP79 889 aa4.94□□□□□ -1.62
GABRA1-220ENST00000638159 DOCK2Q92608 1830 aa4.94□□□□□ -1.62
GABRA1-220ENST00000638159 C2CD4DB7Z1M9 353 aa4.94□□□□□ -1.62
GABRA1-220ENST00000638159 EOMESO95936 686 aa4.94□□□□□ -1.62
GABRA1-220ENST00000638159 ZNF286BP0CG31 522 aa4.94□□□□□ -1.62
GABRA1-220ENST00000638159 MYL4P12829 197 aa4.94□□□□□ -1.62
GABRA1-220ENST00000638159 CPB1P15086 417 aa4.94□□□□□ -1.62
GABRA1-220ENST00000638159 MPLP40238 635 aa4.94□□□□□ -1.62
GABRA1-220ENST00000638159 GNAQP50148 359 aa4.94□□□□□ -1.62
GABRA1-220ENST00000638159 RAB27AP51159 221 aa4.94□□□□□ -1.62
GABRA1-220ENST00000638159 ALDH5A1P51649 535 aaPredicted RBP4.94□□□□□ -1.62
GABRA1-220ENST00000638159 YARSP54577 528 aaKnown RBP4.94□□□□□ -1.62
GABRA1-220ENST00000638159 TSHZ1Q6ZSZ6 1077 aa4.94□□□□□ -1.62
GABRA1-220ENST00000638159 SLC24A5Q71RS6 500 aa4.94□□□□□ -1.62
GABRA1-220ENST00000638159 TMCO2Q7Z6W1 182 aaPredicted RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms