RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 SLC4A7Q9Y6M7 1214 aa14.07□□□□□ -0.16
CLN6-225ENST00000638144 COL1A2P08123 1366 aa14.07□□□□□ -0.16
CLN6-225ENST00000638144 A0A087WWV3 80 aa14.06□□□□□ -0.16
CLN6-225ENST00000638144 DDX11L8A8MPP1 907 aa14.06□□□□□ -0.16
CLN6-225ENST00000638144 STBD1O95210 358 aa14.06□□□□□ -0.16
CLN6-225ENST00000638144 VTNP04004 478 aa14.06□□□□□ -0.16
CLN6-225ENST00000638144 OR52Z1P0C646 297 aa14.06□□□□□ -0.16
CLN6-225ENST00000638144 ACTN1P12814 892 aa14.06□□□□□ -0.16
CLN6-225ENST00000638144 MYOGP15173 224 aa14.06□□□□□ -0.16
CLN6-225ENST00000638144 DEFB103AP81534 67 aa14.06□□□□□ -0.16
CLN6-225ENST00000638144 MGAT3Q09327 533 aa14.06□□□□□ -0.16
CLN6-225ENST00000638144 CNKSR3Q6P9H4 555 aa14.06□□□□□ -0.16
CLN6-225ENST00000638144 RSPH3Q86UC2 560 aa14.06□□□□□ -0.16
CLN6-225ENST00000638144 FERMT3Q86UX7 667 aa14.06□□□□□ -0.16
CLN6-225ENST00000638144 DBF4BQ8NFT6 615 aa14.06□□□□□ -0.16
CLN6-225ENST00000638144 TNPO1Q92973 898 aaKnown RBP14.06□□□□□ -0.16
CLN6-225ENST00000638144 LXNQ9BS40 222 aa14.06□□□□□ -0.16
CLN6-225ENST00000638144 MTIF3Q9H2K0 278 aaKnown RBP14.06□□□□□ -0.16
CLN6-225ENST00000638144 BMP2KQ9NSY1 1161 aaPredicted RBP14.06□□□□□ -0.16
CLN6-225ENST00000638144 NOL7Q9UMY1 257 aaKnown RBP14.06□□□□□ -0.16
CLN6-225ENST00000638144 PCDHA12Q9UN75 941 aa14.06□□□□□ -0.16
CLN6-225ENST00000638144 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.05□□□□□ -0.16
CLN6-225ENST00000638144 SMIM35A0A1B0GVV1 85 aa14.05□□□□□ -0.16
CLN6-225ENST00000638144 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.05□□□□□ -0.16
CLN6-225ENST00000638144 ZBTB39O15060 712 aa14.05□□□□□ -0.16
CLN6-225ENST00000638144 CAND2O75155 1236 aa14.05□□□□□ -0.16
CLN6-225ENST00000638144 ATP2A2P16615 1042 aaKnown RBP14.05□□□□□ -0.16
CLN6-225ENST00000638144 DNAJB2P25686 324 aa14.05□□□□□ -0.16
CLN6-225ENST00000638144 NPEPPSP55786 919 aa14.05□□□□□ -0.16
CLN6-225ENST00000638144 WDR5P61964 334 aaKnown RBP14.05□□□□□ -0.16
CLN6-225ENST00000638144 PSMC5P62195 406 aa14.05□□□□□ -0.16
CLN6-225ENST00000638144 LPIN1Q14693 890 aa14.05□□□□□ -0.16
CLN6-225ENST00000638144 EPHA7Q15375 998 aa14.05□□□□□ -0.16
CLN6-225ENST00000638144 FAM26DQ5JW98 314 aa14.05□□□□□ -0.16
CLN6-225ENST00000638144 FAM117BQ6P1L5 589 aa14.05□□□□□ -0.16
CLN6-225ENST00000638144 ANO5Q75V66 913 aa14.05□□□□□ -0.16
CLN6-225ENST00000638144 KIAA0319LQ8IZA0 1049 aa14.05□□□□□ -0.16
CLN6-225ENST00000638144 ZNF579Q8NAF0 562 aaKnown RBP14.05□□□□□ -0.16
CLN6-225ENST00000638144 PBX4Q9BYU1 374 aa14.05□□□□□ -0.16
CLN6-225ENST00000638144 SUGCTQ9HAC7 445 aa14.05□□□□□ -0.16
CLN6-225ENST00000638144 CDHR5Q9HBB8 845 aa14.05□□□□□ -0.16
CLN6-225ENST00000638144 NRBP2Q9NSY0 501 aa14.05□□□□□ -0.16
CLN6-225ENST00000638144 TRPV2Q9Y5S1 764 aa14.05□□□□□ -0.16
CLN6-225ENST00000638144 P4HBP07237 508 aaKnown RBP14.04□□□□□ -0.16
CLN6-225ENST00000638144 TECP42680 631 aa14.04□□□□□ -0.16
CLN6-225ENST00000638144 QARSP47897 775 aaKnown RBP14.04□□□□□ -0.16
CLN6-225ENST00000638144 KCNJ6P48051 423 aa14.04□□□□□ -0.16
CLN6-225ENST00000638144 SMAD3P84022 425 aaKnown RBP14.04□□□□□ -0.16
CLN6-225ENST00000638144 DRP2Q13474 957 aa14.04□□□□□ -0.16
CLN6-225ENST00000638144 KIZQ2M2Z5 673 aa14.04□□□□□ -0.16
CLN6-225ENST00000638144 TMEM266Q2M3C6 531 aa14.04□□□□□ -0.16
CLN6-225ENST00000638144 PLEKHG4Q58EX7 1191 aa14.04□□□□□ -0.16
CLN6-225ENST00000638144 XKR3Q5GH77 459 aa14.04□□□□□ -0.16
CLN6-225ENST00000638144 FBXO47Q5MNV8 452 aa14.04□□□□□ -0.16
CLN6-225ENST00000638144 EFCAB12Q6NXP0 572 aa14.04□□□□□ -0.16
CLN6-225ENST00000638144 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.04□□□□□ -0.16
CLN6-225ENST00000638144 RPAINQ86UA6 219 aa14.04□□□□□ -0.16
CLN6-225ENST00000638144 HSCBQ8IWL3 235 aa14.04□□□□□ -0.16
CLN6-225ENST00000638144 TPH2Q8IWU9 490 aa14.04□□□□□ -0.16
CLN6-225ENST00000638144 DEFB123Q8N688 67 aa14.04□□□□□ -0.16
CLN6-225ENST00000638144 SPRYD3Q8NCJ5 442 aa14.04□□□□□ -0.16
CLN6-225ENST00000638144 EIF2AK1Q9BQI3 630 aaKnown RBP14.04□□□□□ -0.16
CLN6-225ENST00000638144 IFIH1Q9BYX4 1025 aaKnown RBP14.04□□□□□ -0.16
CLN6-225ENST00000638144 AGO3Q9H9G7 860 aaKnown RBP14.04□□□□□ -0.16
CLN6-225ENST00000638144 CEP131Q9UPN4 1083 aa14.04□□□□□ -0.16
CLN6-225ENST00000638144 YBX2Q9Y2T7 364 aaKnown RBP14.04□□□□□ -0.16
CLN6-225ENST00000638144 CDH23Q9H251 3354 aa14.04□□□□□ -0.16
CLN6-225ENST00000638144 M0QZ92 97 aa14.03□□□□□ -0.16
CLN6-225ENST00000638144 PARNO95453 639 aaKnown RBP14.03□□□□□ -0.16
CLN6-225ENST00000638144 IBSPP21815 317 aaPredicted RBP14.03□□□□□ -0.16
CLN6-225ENST00000638144 CD52P31358 61 aa14.03□□□□□ -0.16
CLN6-225ENST00000638144 TRAPPC10P48553 1259 aa14.03□□□□□ -0.16
CLN6-225ENST00000638144 TBC1D8BQ0IIM8 1120 aa14.03□□□□□ -0.16
CLN6-225ENST00000638144 PTGDRQ13258 359 aa14.03□□□□□ -0.16
CLN6-225ENST00000638144 TARBP2Q15633 366 aaKnown RBP14.03□□□□□ -0.16
CLN6-225ENST00000638144 IER5Q5VY09 327 aa14.03□□□□□ -0.16
CLN6-225ENST00000638144 LINC01465Q8N7H1 131 aa14.03□□□□□ -0.16
CLN6-225ENST00000638144 C4orf32Q8N8J7 132 aa14.03□□□□□ -0.16
CLN6-225ENST00000638144 TMEM40Q8WWA1 233 aa14.03□□□□□ -0.16
CLN6-225ENST00000638144 SEPT8Q92599 483 aa14.03□□□□□ -0.16
CLN6-225ENST00000638144 SNX21Q969T3 373 aa14.03□□□□□ -0.16
CLN6-225ENST00000638144 CEP89Q96ST8 783 aa14.03□□□□□ -0.16
CLN6-225ENST00000638144 OSMRQ99650 979 aa14.03□□□□□ -0.16
CLN6-225ENST00000638144 CELF4Q9BZC1 486 aaKnown RBP14.03□□□□□ -0.16
CLN6-225ENST00000638144 NKX2-4Q9H2Z4 354 aa14.03□□□□□ -0.16
CLN6-225ENST00000638144 TTYH1Q9H313 450 aaPredicted RBP14.03□□□□□ -0.16
CLN6-225ENST00000638144 AKT3Q9Y243 479 aa14.03□□□□□ -0.16
CLN6-225ENST00000638144 BAIAP3O94812 1187 aa14.02□□□□□ -0.17
CLN6-225ENST00000638144 ARHGEF15O94989 841 aa14.02□□□□□ -0.17
CLN6-225ENST00000638144 YWHABP31946 246 aaKnown RBP14.02□□□□□ -0.17
CLN6-225ENST00000638144 MKRN4PQ13434 485 aaPredicted RBP14.02□□□□□ -0.17
CLN6-225ENST00000638144 IKBKEQ14164 716 aa14.02□□□□□ -0.17
CLN6-225ENST00000638144 ZNF697Q5TEC3 545 aa14.02□□□□□ -0.17
CLN6-225ENST00000638144 MYOCDQ8IZQ8 938 aa14.02□□□□□ -0.17
CLN6-225ENST00000638144 TIFAQ96CG3 184 aa14.02□□□□□ -0.17
CLN6-225ENST00000638144 CEP170P1Q96L14 293 aa14.02□□□□□ -0.17
CLN6-225ENST00000638144 MAP7D2Q96T17 732 aa14.02□□□□□ -0.17
CLN6-225ENST00000638144 NIFKQ9BYG3 293 aaKnown RBP14.02□□□□□ -0.17
CLN6-225ENST00000638144 CYP26B1Q9NR63 512 aa14.02□□□□□ -0.17
CLN6-225ENST00000638144 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms