RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 LTBP1Q14766 1721 aa21.96■■□□□ 1.11
SYNGAP1-227ENST00000638142 GTPBP10A4D1E9 387 aaKnown RBP21.96■■□□□ 1.11
SYNGAP1-227ENST00000638142 F8W031 263 aaPredicted RBP21.96■■□□□ 1.11
SYNGAP1-227ENST00000638142 NR3C1P04150 777 aa21.96■■□□□ 1.11
SYNGAP1-227ENST00000638142 SERPINB2P05120 415 aa21.96■■□□□ 1.11
SYNGAP1-227ENST00000638142 NPEPPSP55786 919 aa21.96■■□□□ 1.11
SYNGAP1-227ENST00000638142 PRR16Q569H4 304 aa21.96■■□□□ 1.11
SYNGAP1-227ENST00000638142 NAA35Q5VZE5 725 aa21.96■■□□□ 1.11
SYNGAP1-227ENST00000638142 PEX26Q7Z412 305 aa21.96■■□□□ 1.11
SYNGAP1-227ENST00000638142 RASGEF1CQ8N431 466 aa21.96■■□□□ 1.11
SYNGAP1-227ENST00000638142 CRAMP1Q96RY5 1269 aa21.96■■□□□ 1.11
SYNGAP1-227ENST00000638142 GOLPH3Q9H4A6 298 aa21.96■■□□□ 1.11
SYNGAP1-227ENST00000638142 SIX2Q9NPC8 291 aa21.96■■□□□ 1.11
SYNGAP1-227ENST00000638142 GCOM1H8Y6P7 765 aaPredicted RBP21.95■■□□□ 1.1
SYNGAP1-227ENST00000638142 MYZAPP0CAP1 466 aa21.95■■□□□ 1.1
SYNGAP1-227ENST00000638142 SLC35C1Q96A29 364 aa21.95■■□□□ 1.1
SYNGAP1-227ENST00000638142 SLITRK6Q9H5Y7 841 aa21.95■■□□□ 1.1
SYNGAP1-227ENST00000638142 MEFVO15553 781 aaPredicted RBP21.95■■□□□ 1.1
SYNGAP1-227ENST00000638142 YTHDF3Q7Z739 585 aaKnown RBP21.95■■□□□ 1.1
SYNGAP1-227ENST00000638142 FAM20AQ96MK3 541 aa21.95■■□□□ 1.1
SYNGAP1-227ENST00000638142 STXBP5LQ9Y2K9 1186 aa21.95■■□□□ 1.1
SYNGAP1-227ENST00000638142 TMCO5BA8MYB1 307 aa21.94■■□□□ 1.1
SYNGAP1-227ENST00000638142 H0YGN5 161 aa21.94■■□□□ 1.1
SYNGAP1-227ENST00000638142 KRIT1O00522 736 aa21.94■■□□□ 1.1
SYNGAP1-227ENST00000638142 GFPT2O94808 682 aa21.94■■□□□ 1.1
SYNGAP1-227ENST00000638142 MTMR3Q13615 1198 aa21.94■■□□□ 1.1
SYNGAP1-227ENST00000638142 TCERG1LQ5VWI1 586 aa21.94■■□□□ 1.1
SYNGAP1-227ENST00000638142 CERS5Q8N5B7 392 aa21.94■■□□□ 1.1
SYNGAP1-227ENST00000638142 ZNF473Q8WTR7 871 aaKnown RBP21.94■■□□□ 1.1
SYNGAP1-227ENST00000638142 MKL1Q969V6 931 aa21.94■■□□□ 1.1
SYNGAP1-227ENST00000638142 GCNT4Q9P109 453 aa21.94■■□□□ 1.1
SYNGAP1-227ENST00000638142 NFS1Q9Y697 457 aa21.94■■□□□ 1.1
SYNGAP1-227ENST00000638142 ASTN1O14525 1302 aa21.94■■□□□ 1.1
SYNGAP1-227ENST00000638142 LRRC37AA6NMS7 1700 aa21.94■■□□□ 1.1
SYNGAP1-227ENST00000638142 MEIS1O00470 390 aa21.94■■□□□ 1.1
SYNGAP1-227ENST00000638142 FERP16591 822 aa21.94■■□□□ 1.1
SYNGAP1-227ENST00000638142 HNRNPH1P31943 449 aaKnown RBP21.94■■□□□ 1.1
SYNGAP1-227ENST00000638142 CNPY4Q8N129 248 aa21.94■■□□□ 1.1
SYNGAP1-227ENST00000638142 AP1M1Q9BXS5 423 aa21.94■■□□□ 1.1
SYNGAP1-227ENST00000638142 GEMIN8Q9NWZ8 242 aaKnown RBP21.94■■□□□ 1.1
SYNGAP1-227ENST00000638142 GGA2Q9UJY4 613 aa21.94■■□□□ 1.1
SYNGAP1-227ENST00000638142 USP8P40818 1118 aa21.93■■□□□ 1.1
SYNGAP1-227ENST00000638142 BIRC3Q13489 604 aa21.93■■□□□ 1.1
SYNGAP1-227ENST00000638142 UAP1Q16222 522 aaPredicted RBP21.93■■□□□ 1.1
SYNGAP1-227ENST00000638142 CDC42EP5Q6NZY7 148 aa21.93■■□□□ 1.1
SYNGAP1-227ENST00000638142 RUFY4Q6ZNE9 571 aa21.93■■□□□ 1.1
SYNGAP1-227ENST00000638142 NLRP14Q86W24 1093 aa21.93■■□□□ 1.1
SYNGAP1-227ENST00000638142 OTUD6BQ8N6M0 293 aa21.93■■□□□ 1.1
SYNGAP1-227ENST00000638142 LENG9Q96B70 501 aa21.93■■□□□ 1.1
SYNGAP1-227ENST00000638142 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.92■■□□□ 1.1
SYNGAP1-227ENST00000638142 TBCAO75347 108 aaKnown RBP21.92■■□□□ 1.1
SYNGAP1-227ENST00000638142 CTNNA1P35221 906 aaKnown RBP21.92■■□□□ 1.1
SYNGAP1-227ENST00000638142 KCTD17Q8N5Z5 321 aa21.92■■□□□ 1.1
SYNGAP1-227ENST00000638142 CCDC26Q8TAB7 109 aa21.92■■□□□ 1.1
SYNGAP1-227ENST00000638142 MYCBPAPQ8TBZ2 947 aa21.92■■□□□ 1.1
SYNGAP1-227ENST00000638142 DDX47Q9H0S4 455 aaKnown RBP21.92■■□□□ 1.1
SYNGAP1-227ENST00000638142 NYAP2Q9P242 653 aa21.92■■□□□ 1.1
SYNGAP1-227ENST00000638142 DDX3XO00571 662 aaKnown RBP eCLIP21.92■■□□□ 1.1
SYNGAP1-227ENST00000638142 FAM107AO95990 144 aa21.92■■□□□ 1.1
SYNGAP1-227ENST00000638142 FOSP01100 380 aaPredicted RBP21.92■■□□□ 1.1
SYNGAP1-227ENST00000638142 GYS1P13807 737 aa21.92■■□□□ 1.1
SYNGAP1-227ENST00000638142 SLFN13Q68D06 897 aa21.92■■□□□ 1.1
SYNGAP1-227ENST00000638142 NT5DC3Q86UY8 548 aa21.92■■□□□ 1.1
SYNGAP1-227ENST00000638142 PRPF38AQ8NAV1 312 aaKnown RBP21.92■■□□□ 1.1
SYNGAP1-227ENST00000638142 CCT8L2Q96SF2 557 aa21.92■■□□□ 1.1
SYNGAP1-227ENST00000638142 AJAP1Q9UKB5 411 aaPredicted RBP21.92■■□□□ 1.1
SYNGAP1-227ENST00000638142 SREBF1P36956 1147 aa21.91■■□□□ 1.1
SYNGAP1-227ENST00000638142 HHIPL2Q6UWX4 724 aa21.91■■□□□ 1.1
SYNGAP1-227ENST00000638142 DAAM2Q86T65 1068 aa21.91■■□□□ 1.1
SYNGAP1-227ENST00000638142 SP8Q8IXZ3 490 aa21.91■■□□□ 1.1
SYNGAP1-227ENST00000638142 SEC14L1Q92503 715 aa21.91■■□□□ 1.1
SYNGAP1-227ENST00000638142 HES6Q96HZ4 224 aa21.91■■□□□ 1.1
SYNGAP1-227ENST00000638142 NGLY1Q96IV0 654 aa21.91■■□□□ 1.1
SYNGAP1-227ENST00000638142 AMNQ9BXJ7 453 aa21.91■■□□□ 1.1
SYNGAP1-227ENST00000638142 POLD4Q9HCU8 107 aa21.91■■□□□ 1.1
SYNGAP1-227ENST00000638142 OLFML3Q9NRN5 406 aa21.91■■□□□ 1.1
SYNGAP1-227ENST00000638142 RIMBP2O15034 1052 aa21.91■■□□□ 1.1
SYNGAP1-227ENST00000638142 FSBPO95073 299 aa21.91■■□□□ 1.1
SYNGAP1-227ENST00000638142 GCNT3O95395 438 aa21.91■■□□□ 1.1
SYNGAP1-227ENST00000638142 EEF2P13639 858 aaKnown RBP21.91■■□□□ 1.1
SYNGAP1-227ENST00000638142 STAT1P42224 750 aa21.91■■□□□ 1.1
SYNGAP1-227ENST00000638142 CASP4P49662 377 aa21.91■■□□□ 1.1
SYNGAP1-227ENST00000638142 ZNF844Q08AG5 666 aa21.91■■□□□ 1.1
SYNGAP1-227ENST00000638142 FBXW10Q5XX13 1052 aa21.91■■□□□ 1.1
SYNGAP1-227ENST00000638142 KCNV1Q6PIU1 500 aa21.91■■□□□ 1.1
SYNGAP1-227ENST00000638142 DDX42Q86XP3 938 aaKnown RBP eCLIP21.91■■□□□ 1.1
SYNGAP1-227ENST00000638142 DNAAF5Q86Y56 855 aa21.91■■□□□ 1.1
SYNGAP1-227ENST00000638142 P2RX7Q99572 595 aaKnown RBP21.91■■□□□ 1.1
SYNGAP1-227ENST00000638142 POLR3CQ9BUI4 534 aaPredicted RBP21.91■■□□□ 1.1
SYNGAP1-227ENST00000638142 TTC7AQ9ULT0 858 aaPredicted RBP21.91■■□□□ 1.1
SYNGAP1-227ENST00000638142 SPDYE3A6NKU9 549 aa21.9■■□□□ 1.1
SYNGAP1-227ENST00000638142 RAD21O60216 631 aa21.9■■□□□ 1.1
SYNGAP1-227ENST00000638142 GAP43P17677 238 aa21.9■■□□□ 1.1
SYNGAP1-227ENST00000638142 FNTAP49354 379 aa21.9■■□□□ 1.1
SYNGAP1-227ENST00000638142 NEUROG2Q9H2A3 272 aa21.9■■□□□ 1.1
SYNGAP1-227ENST00000638142 BHMT2Q9H2M3 363 aa21.9■■□□□ 1.1
SYNGAP1-227ENST00000638142 RSPH10B2B2RC85 870 aa21.9■■□□□ 1.1
SYNGAP1-227ENST00000638142 FAM86B1E9PN63 330 aa21.9■■□□□ 1.1
SYNGAP1-227ENST00000638142 EYA4O95677 639 aa21.9■■□□□ 1.1
SYNGAP1-227ENST00000638142 FAM86B2P0C5J1 330 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms