RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 SIX6OS1Q8N1H7 587 aa20.62■□□□□ 0.89
CACNA1A-257ENST00000638009 NACC1Q96RE7 527 aa20.62■□□□□ 0.89
CACNA1A-257ENST00000638009 YIPF3Q9GZM5 350 aa20.62■□□□□ 0.89
CACNA1A-257ENST00000638009 PSTPIP2Q9H939 334 aa20.62■□□□□ 0.89
CACNA1A-257ENST00000638009 ERAP1Q9NZ08 941 aa20.62■□□□□ 0.89
CACNA1A-257ENST00000638009 LRRIQ4A6NIV6 560 aa20.62■□□□□ 0.89
CACNA1A-257ENST00000638009 NFIBO00712 420 aa20.62■□□□□ 0.89
CACNA1A-257ENST00000638009 KRT1P04264 644 aa20.62■□□□□ 0.89
CACNA1A-257ENST00000638009 HSPA13P48723 471 aa20.62■□□□□ 0.89
CACNA1A-257ENST00000638009 RBM46Q8TBY0 533 aaKnown RBP20.62■□□□□ 0.89
CACNA1A-257ENST00000638009 CAPZA2P47755 286 aa20.62■□□□□ 0.89
CACNA1A-257ENST00000638009 CSADQ9Y600 493 aa20.62■□□□□ 0.89
CACNA1A-257ENST00000638009 INAQ16352 499 aa20.62■□□□□ 0.89
CACNA1A-257ENST00000638009 VPS50Q96JG6 964 aa20.62■□□□□ 0.89
CACNA1A-257ENST00000638009 CLEC4MQ9H2X3 399 aaPredicted RBP20.62■□□□□ 0.89
CACNA1A-257ENST00000638009 PLXNC1O60486 1568 aa20.62■□□□□ 0.89
CACNA1A-257ENST00000638009 BBS7Q8IWZ6 715 aa20.62■□□□□ 0.89
CACNA1A-257ENST00000638009 IRS4O14654 1257 aaPredicted RBP20.61■□□□□ 0.89
CACNA1A-257ENST00000638009 MXD4Q14582 209 aaPredicted RBP20.61■□□□□ 0.89
CACNA1A-257ENST00000638009 RDH13Q8NBN7 331 aa20.61■□□□□ 0.89
CACNA1A-257ENST00000638009 SCN3BQ9NY72 215 aa20.61■□□□□ 0.89
CACNA1A-257ENST00000638009 FARP1Q9Y4F1 1045 aaPredicted RBP20.61■□□□□ 0.89
CACNA1A-257ENST00000638009 SYNCRIPO60506 623 aaKnown RBP20.61■□□□□ 0.89
CACNA1A-257ENST00000638009 PLEKHM2Q8IWE5 1019 aa20.61■□□□□ 0.89
CACNA1A-257ENST00000638009 RBM41Q96IZ5 413 aaKnown RBP20.61■□□□□ 0.89
CACNA1A-257ENST00000638009 AKAP4Q5JQC9 854 aa20.61■□□□□ 0.89
CACNA1A-257ENST00000638009 ERICH1Q86X53 443 aa20.61■□□□□ 0.89
CACNA1A-257ENST00000638009 GTSE1Q9NYZ3 720 aa20.61■□□□□ 0.89
CACNA1A-257ENST00000638009 C5orf58C9J3I9 102 aa20.61■□□□□ 0.89
CACNA1A-257ENST00000638009 ANGPT2O15123 496 aa20.61■□□□□ 0.89
CACNA1A-257ENST00000638009 FKBP3Q00688 224 aaKnown RBP20.61■□□□□ 0.89
CACNA1A-257ENST00000638009 MEI1Q5TIA1 1274 aa20.61■□□□□ 0.89
CACNA1A-257ENST00000638009 DCAF15Q66K64 600 aa20.61■□□□□ 0.89
CACNA1A-257ENST00000638009 RINLQ6ZS11 566 aa20.61■□□□□ 0.89
CACNA1A-257ENST00000638009 PPP1R2P1Q96PQ5 205 aa20.61■□□□□ 0.89
CACNA1A-257ENST00000638009 OSBPL1AQ9BXW6 950 aa20.61■□□□□ 0.89
CACNA1A-257ENST00000638009 SERPING1P05155 500 aa20.61■□□□□ 0.89
CACNA1A-257ENST00000638009 HIC1Q14526 733 aa20.61■□□□□ 0.89
CACNA1A-257ENST00000638009 HABP4Q5JVS0 413 aaKnown RBP20.61■□□□□ 0.89
CACNA1A-257ENST00000638009 MYH1P12882 1939 aa20.61■□□□□ 0.89
CACNA1A-257ENST00000638009 MYH2Q9UKX2 1941 aa20.61■□□□□ 0.89
CACNA1A-257ENST00000638009 MYH4Q9Y623 1939 aa20.61■□□□□ 0.89
CACNA1A-257ENST00000638009 TRAPPC10P48553 1259 aa20.61■□□□□ 0.89
CACNA1A-257ENST00000638009 XKR9Q5GH70 373 aa20.61■□□□□ 0.89
CACNA1A-257ENST00000638009 NRBP2Q9NSY0 501 aa20.61■□□□□ 0.89
CACNA1A-257ENST00000638009 LAMB3Q13751 1172 aa20.6■□□□□ 0.89
CACNA1A-257ENST00000638009 FHDC1Q9C0D6 1143 aaPredicted RBP20.6■□□□□ 0.89
CACNA1A-257ENST00000638009 ARMCX4Q5H9R4 360 aa20.6■□□□□ 0.89
CACNA1A-257ENST00000638009 TDRD7Q8NHU6 1098 aaKnown RBP20.6■□□□□ 0.89
CACNA1A-257ENST00000638009 CNOT6LQ96LI5 555 aaKnown RBP20.6■□□□□ 0.89
CACNA1A-257ENST00000638009 HPS5Q9UPZ3 1129 aa20.6■□□□□ 0.89
CACNA1A-257ENST00000638009 CCDC149Q6ZUS6 474 aa20.6■□□□□ 0.89
CACNA1A-257ENST00000638009 PHF8Q9UPP1 1060 aa20.6■□□□□ 0.89
CACNA1A-257ENST00000638009 VCPP55072 806 aaKnown RBP20.6■□□□□ 0.89
CACNA1A-257ENST00000638009 MYLK2Q9H1R3 596 aa20.6■□□□□ 0.89
CACNA1A-257ENST00000638009 ASZ1Q8WWH4 475 aa20.6■□□□□ 0.89
CACNA1A-257ENST00000638009 ECT2Q9H8V3 914 aa20.6■□□□□ 0.89
CACNA1A-257ENST00000638009 MFN1Q8IWA4 741 aa20.6■□□□□ 0.89
CACNA1A-257ENST00000638009 DIS3LQ8TF46 1054 aaKnown RBP20.6■□□□□ 0.89
CACNA1A-257ENST00000638009 PLEKHA4Q9H4M7 779 aa20.6■□□□□ 0.89
CACNA1A-257ENST00000638009 MAP3K5Q99683 1374 aa20.6■□□□□ 0.89
CACNA1A-257ENST00000638009 KRT76Q01546 638 aa20.59■□□□□ 0.89
CACNA1A-257ENST00000638009 ATAD3BQ5T9A4 648 aa20.59■□□□□ 0.89
CACNA1A-257ENST00000638009 VIPAS39Q9H9C1 493 aa20.59■□□□□ 0.89
CACNA1A-257ENST00000638009 IGHDP01880 384 aa20.59■□□□□ 0.89
CACNA1A-257ENST00000638009 PSMC6P62333 389 aa20.59■□□□□ 0.89
CACNA1A-257ENST00000638009 PARP9Q8IXQ6 854 aa20.59■□□□□ 0.89
CACNA1A-257ENST00000638009 MRPL1Q9BYD6 325 aaKnown RBP20.59■□□□□ 0.89
CACNA1A-257ENST00000638009 RAD21L1Q9H4I0 556 aa20.59■□□□□ 0.89
CACNA1A-257ENST00000638009 KLHL12Q53G59 568 aa20.59■□□□□ 0.89
CACNA1A-257ENST00000638009 SLC7A3Q8WY07 619 aa20.59■□□□□ 0.89
CACNA1A-257ENST00000638009 ADAMTS2O95450 1211 aa20.59■□□□□ 0.89
CACNA1A-257ENST00000638009 CCDC134Q9H6E4 229 aa20.59■□□□□ 0.89
CACNA1A-257ENST00000638009 TRIM16LQ309B1 348 aa20.59■□□□□ 0.89
CACNA1A-257ENST00000638009 PCYOX1LQ8NBM8 494 aa20.59■□□□□ 0.89
CACNA1A-257ENST00000638009 APPL2Q8NEU8 664 aa20.59■□□□□ 0.89
CACNA1A-257ENST00000638009 UHRF1BP1Q6BDS2 1440 aa20.59■□□□□ 0.89
CACNA1A-257ENST00000638009 SYNJ2BP-COX16A0A087WUM0 186 aa20.59■□□□□ 0.89
CACNA1A-257ENST00000638009 POLR2MP0CAP2 368 aa20.59■□□□□ 0.89
CACNA1A-257ENST00000638009 BLIDQ8IZY5 108 aa20.59■□□□□ 0.89
CACNA1A-257ENST00000638009 CNBD1Q8NA66 436 aa20.59■□□□□ 0.89
CACNA1A-257ENST00000638009 COG1Q8WTW3 980 aa20.59■□□□□ 0.89
CACNA1A-257ENST00000638009 COX16Q9P0S2 106 aa20.59■□□□□ 0.89
CACNA1A-257ENST00000638009 GGA1Q9UJY5 639 aa20.59■□□□□ 0.89
CACNA1A-257ENST00000638009 SAP30BPQ9UHR5 308 aaKnown RBP20.59■□□□□ 0.89
CACNA1A-257ENST00000638009 ACSL3O95573 720 aa20.58■□□□□ 0.89
CACNA1A-257ENST00000638009 HSPA9P38646 679 aaKnown RBP20.58■□□□□ 0.89
CACNA1A-257ENST00000638009 NLRP11P59045 1033 aaKnown RBP20.58■□□□□ 0.89
CACNA1A-257ENST00000638009 PLCH2O75038 1416 aa20.58■□□□□ 0.89
CACNA1A-257ENST00000638009 PANX2Q96RD6 677 aa20.58■□□□□ 0.89
CACNA1A-257ENST00000638009 TINF2Q9BSI4 451 aa20.58■□□□□ 0.89
CACNA1A-257ENST00000638009 TESPA1A2RU30 521 aaPredicted RBP20.58■□□□□ 0.89
CACNA1A-257ENST00000638009 NBPF26B4DH59 902 aa20.58■□□□□ 0.89
CACNA1A-257ENST00000638009 NCF4Q15080 339 aa20.58■□□□□ 0.89
CACNA1A-257ENST00000638009 LVRNQ6Q4G3 990 aa20.58■□□□□ 0.89
CACNA1A-257ENST00000638009 NBPF15Q8N660 670 aa20.58■□□□□ 0.89
CACNA1A-257ENST00000638009 LZTS1Q9Y250 596 aa20.58■□□□□ 0.89
CACNA1A-257ENST00000638009 MED23Q9ULK4 1368 aa20.58■□□□□ 0.89
CACNA1A-257ENST00000638009 NNMTP40261 264 aa20.58■□□□□ 0.88
CACNA1A-257ENST00000638009 TFCP2Q12800 502 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms