RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 KIF20AO95235 890 aa13.05□□□□□ -0.32
CLN6-223ENST00000637823 OATP04181 439 aa13.05□□□□□ -0.32
CLN6-223ENST00000637823 ATP4AP20648 1035 aa13.05□□□□□ -0.32
CLN6-223ENST00000637823 SLC26A2P50443 739 aa13.05□□□□□ -0.32
CLN6-223ENST00000637823 TNFAIP2Q03169 654 aa13.05□□□□□ -0.32
CLN6-223ENST00000637823 PAK1Q13153 545 aa13.05□□□□□ -0.32
CLN6-223ENST00000637823 NCAPHQ15003 741 aa13.05□□□□□ -0.32
CLN6-223ENST00000637823 CCL14Q16627 93 aa13.05□□□□□ -0.32
CLN6-223ENST00000637823 PRAMEF19Q5SWL8 479 aa13.05□□□□□ -0.32
CLN6-223ENST00000637823 TMEM63BQ5T3F8 832 aa13.05□□□□□ -0.32
CLN6-223ENST00000637823 UTP14CQ5TAP6 766 aaKnown RBP13.05□□□□□ -0.32
CLN6-223ENST00000637823 SPATA1Q5VX52 437 aa13.05□□□□□ -0.32
CLN6-223ENST00000637823 KLHL10Q6JEL2 608 aa13.05□□□□□ -0.32
CLN6-223ENST00000637823 GUF1Q8N442 669 aaKnown RBP13.05□□□□□ -0.32
CLN6-223ENST00000637823 PPTC7Q8NI37 304 aa13.05□□□□□ -0.32
CLN6-223ENST00000637823 NELFBQ8WX92 580 aa13.05□□□□□ -0.32
CLN6-223ENST00000637823 FAM167AQ96KS9 214 aa13.05□□□□□ -0.32
CLN6-223ENST00000637823 CEP170P1Q96L14 293 aa13.05□□□□□ -0.32
CLN6-223ENST00000637823 ZHX3Q9H4I2 956 aa13.05□□□□□ -0.32
CLN6-223ENST00000637823 SMARCAD1Q9H4L7 1026 aa13.05□□□□□ -0.32
CLN6-223ENST00000637823 SEL1LQ9UBV2 794 aa13.05□□□□□ -0.32
CLN6-223ENST00000637823 NRBP1Q9UHY1 535 aa13.05□□□□□ -0.32
CLN6-223ENST00000637823 PPME1Q9Y570 386 aa13.05□□□□□ -0.32
CLN6-223ENST00000637823 PCDHA2Q9Y5H9 948 aa13.05□□□□□ -0.32
CLN6-223ENST00000637823 EMSYQ7Z589 1322 aa13.05□□□□□ -0.32
CLN6-223ENST00000637823 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.04□□□□□ -0.32
CLN6-223ENST00000637823 BICDL2A1A5D9 508 aa13.04□□□□□ -0.32
CLN6-223ENST00000637823 PPFIA4O75335 1185 aa13.04□□□□□ -0.32
CLN6-223ENST00000637823 GNRH1P01148 92 aa13.04□□□□□ -0.32
CLN6-223ENST00000637823 ZNF865P0CJ78 1059 aaPredicted RBP13.04□□□□□ -0.32
CLN6-223ENST00000637823 SMPD1P17405 629 aa13.04□□□□□ -0.32
CLN6-223ENST00000637823 HOXD10P28358 340 aa13.04□□□□□ -0.32
CLN6-223ENST00000637823 CYP2C19P33261 490 aa13.04□□□□□ -0.32
CLN6-223ENST00000637823 ZNF131P52739 623 aa13.04□□□□□ -0.32
CLN6-223ENST00000637823 NPEPPSP55786 919 aa13.04□□□□□ -0.32
CLN6-223ENST00000637823 HTRA3P83110 453 aa13.04□□□□□ -0.32
CLN6-223ENST00000637823 CACNB1Q02641 598 aaPredicted RBP13.04□□□□□ -0.32
CLN6-223ENST00000637823 MFSD14CQ5VZR4 134 aa13.04□□□□□ -0.32
CLN6-223ENST00000637823 PLA2G4FQ68DD2 849 aa13.04□□□□□ -0.32
CLN6-223ENST00000637823 MYOCDQ8IZQ8 938 aa13.04□□□□□ -0.32
CLN6-223ENST00000637823 MYCT1Q8N699 235 aa13.04□□□□□ -0.32
CLN6-223ENST00000637823 KIAA0895Q8NCT3 520 aa13.04□□□□□ -0.32
CLN6-223ENST00000637823 GLG1Q92896 1179 aa13.04□□□□□ -0.32
CLN6-223ENST00000637823 HPS3Q969F9 1004 aa13.04□□□□□ -0.32
CLN6-223ENST00000637823 MED15Q96RN5 788 aa13.04□□□□□ -0.32
CLN6-223ENST00000637823 PARVGQ9HBI0 331 aa13.04□□□□□ -0.32
CLN6-223ENST00000637823 PDLIM7Q9NR12 457 aa13.04□□□□□ -0.32
CLN6-223ENST00000637823 CYP26B1Q9NR63 512 aa13.04□□□□□ -0.32
CLN6-223ENST00000637823 SAGE1Q9NXZ1 904 aa13.04□□□□□ -0.32
CLN6-223ENST00000637823 SEPT9Q9UHD8 586 aaPredicted RBP13.04□□□□□ -0.32
CLN6-223ENST00000637823 GABRQQ9UN88 632 aa13.04□□□□□ -0.32
CLN6-223ENST00000637823 CTNND2Q9UQB3 1225 aa13.04□□□□□ -0.32
CLN6-223ENST00000637823 MAPK8IP1Q9UQF2 711 aa13.04□□□□□ -0.32
CLN6-223ENST00000637823 Q9Y3F1 56 aa13.04□□□□□ -0.32
CLN6-223ENST00000637823 EVPLQ92817 2033 aa13.03□□□□□ -0.32
CLN6-223ENST00000637823 TMEM150BA6NC51 233 aa13.03□□□□□ -0.32
CLN6-223ENST00000637823 RSPH10B2B2RC85 870 aa13.03□□□□□ -0.32
CLN6-223ENST00000637823 GPR25O00155 361 aa13.03□□□□□ -0.32
CLN6-223ENST00000637823 USO1O60763 962 aaKnown RBP13.03□□□□□ -0.32
CLN6-223ENST00000637823 HIP1RO75146 1068 aa13.03□□□□□ -0.32
CLN6-223ENST00000637823 DGAT1O75907 488 aa13.03□□□□□ -0.32
CLN6-223ENST00000637823 RSPH10BP0C881 870 aa13.03□□□□□ -0.32
CLN6-223ENST00000637823 CCNE1P24864 410 aa13.03□□□□□ -0.32
CLN6-223ENST00000637823 FLT3LGP49771 235 aa13.03□□□□□ -0.32
CLN6-223ENST00000637823 STX17P56962 302 aa13.03□□□□□ -0.32
CLN6-223ENST00000637823 ARHGEF6Q15052 776 aa13.03□□□□□ -0.32
CLN6-223ENST00000637823 GJC2Q5T442 439 aaPredicted RBP13.03□□□□□ -0.32
CLN6-223ENST00000637823 FOXR2Q6PJQ5 311 aa13.03□□□□□ -0.32
CLN6-223ENST00000637823 TRMT1LQ7Z2T5 733 aaKnown RBP13.03□□□□□ -0.32
CLN6-223ENST00000637823 SFR1Q86XK3 245 aa13.03□□□□□ -0.32
CLN6-223ENST00000637823 EXOC8Q8IYI6 725 aa13.03□□□□□ -0.32
CLN6-223ENST00000637823 OR6J1Q8NGC5 347 aa13.03□□□□□ -0.32
CLN6-223ENST00000637823 BBXQ8WY36 941 aaPredicted RBP13.03□□□□□ -0.32
CLN6-223ENST00000637823 P2RX5Q93086 422 aa13.03□□□□□ -0.32
CLN6-223ENST00000637823 DRC1Q96MC2 740 aa13.03□□□□□ -0.32
CLN6-223ENST00000637823 OLFML3Q9NRN5 406 aa13.03□□□□□ -0.32
CLN6-223ENST00000637823 FANCLQ9NW38 375 aa13.03□□□□□ -0.32
CLN6-223ENST00000637823 TBC1D7Q9P0N9 293 aa13.03□□□□□ -0.32
CLN6-223ENST00000637823 FAM184BQ9ULE4 1060 aa13.03□□□□□ -0.32
CLN6-223ENST00000637823 NFE2L3Q9Y4A8 694 aa13.03□□□□□ -0.32
CLN6-223ENST00000637823 SYNRGQ9UMZ2 1314 aa13.03□□□□□ -0.32
CLN6-223ENST00000637823 SFI1A8K8P3 1242 aa13.02□□□□□ -0.33
CLN6-223ENST00000637823 MAPTP10636 758 aaKnown RBP13.02□□□□□ -0.33
CLN6-223ENST00000637823 HOXD8P13378 290 aaPredicted RBP13.02□□□□□ -0.33
CLN6-223ENST00000637823 RFC5P40937 340 aa13.02□□□□□ -0.33
CLN6-223ENST00000637823 PLCB2Q00722 1185 aa13.02□□□□□ -0.33
CLN6-223ENST00000637823 MAPK7Q13164 816 aa13.02□□□□□ -0.33
CLN6-223ENST00000637823 LRRC41Q15345 812 aa13.02□□□□□ -0.33
CLN6-223ENST00000637823 TARBP2Q15633 366 aaKnown RBP13.02□□□□□ -0.33
CLN6-223ENST00000637823 TPD52L1Q16890 204 aaPredicted RBP13.02□□□□□ -0.33
CLN6-223ENST00000637823 MTERF2Q49AM1 385 aa13.02□□□□□ -0.33
CLN6-223ENST00000637823 CENPPQ6IPU0 288 aa13.02□□□□□ -0.33
CLN6-223ENST00000637823 SARM1Q6SZW1 724 aa13.02□□□□□ -0.33
CLN6-223ENST00000637823 STXBP4Q6ZWJ1 553 aa13.02□□□□□ -0.33
CLN6-223ENST00000637823 EPM2AIP1Q7L775 607 aaPredicted RBP13.02□□□□□ -0.33
CLN6-223ENST00000637823 DAW1Q8N136 415 aa13.02□□□□□ -0.33
CLN6-223ENST00000637823 MCPH1Q8NEM0 835 aa13.02□□□□□ -0.33
CLN6-223ENST00000637823 ATP8B4Q8TF62 1192 aa13.02□□□□□ -0.33
CLN6-223ENST00000637823 AFG1LQ8WV93 481 aa13.02□□□□□ -0.33
CLN6-223ENST00000637823 KIFAP3Q92845 792 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms