RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.56■□□□□ 0.08
PNKP-228ENST00000637325 MICALL1Q8N3F8 863 aa15.56■□□□□ 0.08
PNKP-228ENST00000637325 USP38Q8NB14 1042 aa15.56■□□□□ 0.08
PNKP-228ENST00000637325 RDM1Q8NG50 284 aa15.56■□□□□ 0.08
PNKP-228ENST00000637325 YME1L1Q96TA2 773 aa15.56■□□□□ 0.08
PNKP-228ENST00000637325 SQORQ9Y6N5 450 aa15.56■□□□□ 0.08
PNKP-228ENST00000637325 IGSF9BQ9UPX0 1349 aa15.56■□□□□ 0.08
PNKP-228ENST00000637325 EYSQ5T1H1 3165 aa15.55■□□□□ 0.08
PNKP-228ENST00000637325 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.55■□□□□ 0.08
PNKP-228ENST00000637325 ZBTB42B2RXF5 422 aa15.55■□□□□ 0.08
PNKP-228ENST00000637325 MAGEB2O15479 319 aa15.55■□□□□ 0.08
PNKP-228ENST00000637325 SLC37A4O43826 429 aa15.55■□□□□ 0.08
PNKP-228ENST00000637325 ARHGEF15O94989 841 aa15.55■□□□□ 0.08
PNKP-228ENST00000637325 TMOD1P28289 359 aa15.55■□□□□ 0.08
PNKP-228ENST00000637325 CD52P31358 61 aa15.55■□□□□ 0.08
PNKP-228ENST00000637325 PRKCEQ02156 737 aa15.55■□□□□ 0.08
PNKP-228ENST00000637325 PAK2Q13177 524 aa15.55■□□□□ 0.08
PNKP-228ENST00000637325 NR5A1Q13285 461 aa15.55■□□□□ 0.08
PNKP-228ENST00000637325 MKRN4PQ13434 485 aaPredicted RBP15.55■□□□□ 0.08
PNKP-228ENST00000637325 PPP4R3AQ6IN85 833 aa15.55■□□□□ 0.08
PNKP-228ENST00000637325 CCDC83Q8IWF9 413 aa15.55■□□□□ 0.08
PNKP-228ENST00000637325 KIAA0319LQ8IZA0 1049 aa15.55■□□□□ 0.08
PNKP-228ENST00000637325 ETNPPLQ8TBG4 499 aa15.55■□□□□ 0.08
PNKP-228ENST00000637325 TOP1MTQ969P6 601 aa15.55■□□□□ 0.08
PNKP-228ENST00000637325 ZSCAN31Q96LW9 406 aaPredicted RBP15.55■□□□□ 0.08
PNKP-228ENST00000637325 FAM20AQ96MK3 541 aa15.55■□□□□ 0.08
PNKP-228ENST00000637325 TGS1Q96RS0 853 aaKnown RBP15.55■□□□□ 0.08
PNKP-228ENST00000637325 UPF2Q9HAU5 1272 aaKnown RBP15.55■□□□□ 0.08
PNKP-228ENST00000637325 RALGAPA2Q2PPJ7 1873 aa15.54■□□□□ 0.08
PNKP-228ENST00000637325 COL4A4P53420 1690 aaPredicted RBP15.54■□□□□ 0.08
PNKP-228ENST00000637325 KDM3AQ9Y4C1 1321 aa15.54■□□□□ 0.08
PNKP-228ENST00000637325 LINC01553A4QN01 128 aa15.54■□□□□ 0.08
PNKP-228ENST00000637325 ENPP3O14638 875 aa15.54■□□□□ 0.08
PNKP-228ENST00000637325 BAG4O95429 457 aaKnown RBP15.54■□□□□ 0.08
PNKP-228ENST00000637325 C22orf31O95567 290 aa15.54■□□□□ 0.08
PNKP-228ENST00000637325 SAFBQ15424 915 aaKnown RBP eCLIP15.54■□□□□ 0.08
PNKP-228ENST00000637325 ODR4Q5SWX8 454 aa15.54■□□□□ 0.08
PNKP-228ENST00000637325 FTHL17Q9BXU8 183 aa15.54■□□□□ 0.08
PNKP-228ENST00000637325 AGO3Q9H9G7 860 aaKnown RBP15.54■□□□□ 0.08
PNKP-228ENST00000637325 SEPT9Q9UHD8 586 aaPredicted RBP15.54■□□□□ 0.08
PNKP-228ENST00000637325 MTUS1Q9ULD2 1270 aa15.54■□□□□ 0.08
PNKP-228ENST00000637325 MYO7AQ13402 2215 aa15.53■□□□□ 0.08
PNKP-228ENST00000637325 TRANK1O15050 2925 aa15.53■□□□□ 0.08
PNKP-228ENST00000637325 EPOPA6NHQ4 379 aa15.53■□□□□ 0.08
PNKP-228ENST00000637325 ZNF862O60290 1169 aa15.53■□□□□ 0.08
PNKP-228ENST00000637325 MMP1P03956 469 aa15.53■□□□□ 0.08
PNKP-228ENST00000637325 HTRA4P83105 476 aaPredicted RBP15.53■□□□□ 0.08
PNKP-228ENST00000637325 NFX1Q12986 1120 aaKnown RBP15.53■□□□□ 0.08
PNKP-228ENST00000637325 UGCGQ16739 394 aa15.53■□□□□ 0.08
PNKP-228ENST00000637325 EARS2Q5JPH6 523 aaKnown RBP15.53■□□□□ 0.08
PNKP-228ENST00000637325 KRT40Q6A162 431 aa15.53■□□□□ 0.08
PNKP-228ENST00000637325 EFCAB12Q6NXP0 572 aa15.53■□□□□ 0.08
PNKP-228ENST00000637325 DIS3L2Q8IYB7 885 aaKnown RBP15.53■□□□□ 0.08
PNKP-228ENST00000637325 MAP7D2Q96T17 732 aa15.53■□□□□ 0.08
PNKP-228ENST00000637325 PPP1R16BQ96T49 567 aa15.53■□□□□ 0.08
PNKP-228ENST00000637325 LLPHQ9BRT6 129 aaKnown RBP15.53■□□□□ 0.08
PNKP-228ENST00000637325 SUGCTQ9HAC7 445 aa15.53■□□□□ 0.08
PNKP-228ENST00000637325 SH2B1Q9NRF2 756 aaPredicted RBP15.53■□□□□ 0.08
PNKP-228ENST00000637325 PADI3Q9ULW8 664 aa15.53■□□□□ 0.08
PNKP-228ENST00000637325 AKT3Q9Y243 479 aa15.53■□□□□ 0.08
PNKP-228ENST00000637325 A0A0C4DFX4 3053 aa15.53■□□□□ 0.08
PNKP-228ENST00000637325 FAM205CA6NFA0 338 aa15.52■□□□□ 0.08
PNKP-228ENST00000637325 DDX11L8A8MPP1 907 aa15.52■□□□□ 0.08
PNKP-228ENST00000637325 BTBD18B2RXH4 712 aa15.52■□□□□ 0.08
PNKP-228ENST00000637325 TBX3O15119 743 aa15.52■□□□□ 0.08
PNKP-228ENST00000637325 RPS6KA5O75582 802 aa15.52■□□□□ 0.08
PNKP-228ENST00000637325 VTNP04004 478 aa15.52■□□□□ 0.08
PNKP-228ENST00000637325 CLCN3P51790 818 aa15.52■□□□□ 0.08
PNKP-228ENST00000637325 ERVK-21P61565 698 aa15.52■□□□□ 0.08
PNKP-228ENST00000637325 GUCY1B3Q02153 619 aa15.52■□□□□ 0.08
PNKP-228ENST00000637325 TBC1D8BQ0IIM8 1120 aa15.52■□□□□ 0.08
PNKP-228ENST00000637325 ST3GAL1Q11201 340 aa15.52■□□□□ 0.08
PNKP-228ENST00000637325 TMEM266Q2M3C6 531 aa15.52■□□□□ 0.08
PNKP-228ENST00000637325 MTERF2Q49AM1 385 aa15.52■□□□□ 0.08
PNKP-228ENST00000637325 XKR3Q5GH77 459 aa15.52■□□□□ 0.08
PNKP-228ENST00000637325 SPRED2Q7Z698 418 aa15.52■□□□□ 0.08
PNKP-228ENST00000637325 SLFN12Q8IYM2 578 aa15.52■□□□□ 0.08
PNKP-228ENST00000637325 FAM184AQ8NB25 1140 aa15.52■□□□□ 0.08
PNKP-228ENST00000637325 C8orf76Q96K31 380 aa15.52■□□□□ 0.08
PNKP-228ENST00000637325 TSPYL2Q9H2G4 693 aaPredicted RBP15.52■□□□□ 0.08
PNKP-228ENST00000637325 KCNMB3Q9NPA1 279 aa15.52■□□□□ 0.08
PNKP-228ENST00000637325 UNC80Q8N2C7 3258 aa15.51■□□□□ 0.07
PNKP-228ENST00000637325 BRWD1Q9NSI6 2320 aa15.51■□□□□ 0.07
PNKP-228ENST00000637325 GPR182O15218 404 aa15.51■□□□□ 0.07
PNKP-228ENST00000637325 DKC1O60832 514 aaKnown RBP eCLIP15.51■□□□□ 0.07
PNKP-228ENST00000637325 IBSPP21815 317 aaPredicted RBP15.51■□□□□ 0.07
PNKP-228ENST00000637325 RBM25P49756 843 aaKnown RBP15.51■□□□□ 0.07
PNKP-228ENST00000637325 CRYBB1P53674 252 aaPredicted RBP15.51■□□□□ 0.07
PNKP-228ENST00000637325 PSMC5P62195 406 aa15.51■□□□□ 0.07
PNKP-228ENST00000637325 GRB10Q13322 594 aa15.51■□□□□ 0.07
PNKP-228ENST00000637325 PPP2R5CQ13362 524 aa15.51■□□□□ 0.07
PNKP-228ENST00000637325 RABEP1Q15276 862 aa15.51■□□□□ 0.07
PNKP-228ENST00000637325 SKIV2LQ15477 1246 aaKnown RBP15.51■□□□□ 0.07
PNKP-228ENST00000637325 KIZQ2M2Z5 673 aa15.51■□□□□ 0.07
PNKP-228ENST00000637325 B3GNT9Q6UX72 402 aa15.51■□□□□ 0.07
PNKP-228ENST00000637325 POTEDQ86YR6 584 aa15.51■□□□□ 0.07
PNKP-228ENST00000637325 LRRC71Q8N4P6 559 aa15.51■□□□□ 0.07
PNKP-228ENST00000637325 BANK1Q8NDB2 785 aa15.51■□□□□ 0.07
PNKP-228ENST00000637325 SP7Q8TDD2 431 aaPredicted RBP15.51■□□□□ 0.07
PNKP-228ENST00000637325 GDPD5Q8WTR4 605 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms