RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 SOX9P48436 509 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 MRE11P49959 708 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 TSPY1Q01534 308 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 ITKQ08881 620 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 MOGSQ13724 837 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 WTAPQ15007 396 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 DDR2Q16832 855 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 MUM1Q2TAK8 710 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 TUBB8Q3ZCM7 444 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.44□□□□□ -1.86
VIM-210ENST00000637053 AMOTQ4VCS5 1084 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 ATP13A4Q4VNC1 1196 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 VPS53Q5VIR6 699 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 SPATA1Q5VX52 437 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 EP400NLQ6ZTU2 488 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 BTN2A1Q7KYR7 527 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 NECAB2Q7Z6G3 386 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 FRMD5Q7Z6J6 570 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 CDH24Q86UP0 819 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 TMEFF1Q8IYR6 380 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 MFSD2AQ8NA29 543 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 SLC16A11Q8NCK7 471 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 CCDC191Q8NCU4 936 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 NEK9Q8TD19 979 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 PARD3BQ8TEW8 1205 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 XAGE3Q8WTP9 111 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 ANAPC16Q96DE5 110 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 Q96M66 194 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 MOGAT1Q96PD6 335 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 GPR20Q99678 358 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 TRIM8Q9BZR9 551 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 SLC13A1Q9BZW2 595 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 NIF3L1Q9GZT8 377 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 CCDC8Q9H0W5 538 aaPredicted RBP3.44□□□□□ -1.86
VIM-210ENST00000637053 CNTD2Q9H8S5 307 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 ATP6V0A4Q9HBG4 840 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 LUC7LQ9NQ29 371 aaKnown RBP3.44□□□□□ -1.86
VIM-210ENST00000637053 KLHL11Q9NVR0 708 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 PIH1D1Q9NWS0 290 aaKnown RBP3.44□□□□□ -1.86
VIM-210ENST00000637053 KCTD5Q9NXV2 234 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 NKIRAS2Q9NYR9 191 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 PPARGC1AQ9UBK2 798 aaKnown RBP3.44□□□□□ -1.86
VIM-210ENST00000637053 ZMAT5Q9UDW3 170 aaKnown RBP3.44□□□□□ -1.86
VIM-210ENST00000637053 ADAMTS1Q9UHI8 967 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 HERC5Q9UII4 1024 aaKnown RBP3.44□□□□□ -1.86
VIM-210ENST00000637053 PCDHA4Q9UN74 947 aa3.44□□□□□ -1.86
VIM-210ENST00000637053 FAM221AA4D161 298 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 GSG1L2A8MUP6 293 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 SMAD7O15105 426 aaKnown RBP3.43□□□□□ -1.86
VIM-210ENST00000637053 RASA4O43374 803 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 SGTAO43765 313 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 TIPRLO75663 272 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 EYA4O95677 639 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 ZNF853P0CG23 659 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 DESP17661 470 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 BTF3P20290 206 aaKnown RBP3.43□□□□□ -1.86
VIM-210ENST00000637053 GARTP22102 1010 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 XPAP23025 273 aaPredicted RBP3.43□□□□□ -1.86
VIM-210ENST00000637053 KIR3DL1P43629 444 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 PAPOLAP51003 745 aaKnown RBP3.43□□□□□ -1.86
VIM-210ENST00000637053 RCAN1P53805 252 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 TMF1P82094 1093 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 MRPS35P82673 323 aaKnown RBP3.43□□□□□ -1.86
VIM-210ENST00000637053 SRSF3P84103 164 aaKnown RBP3.43□□□□□ -1.86
VIM-210ENST00000637053 MPP1Q00013 466 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 PTPN11Q06124 597 aaPredicted RBP3.43□□□□□ -1.86
VIM-210ENST00000637053 EGR3Q06889 387 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 CACNB2Q08289 660 aaPredicted RBP3.43□□□□□ -1.86
VIM-210ENST00000637053 MRPL28Q13084 256 aaKnown RBP3.43□□□□□ -1.86
VIM-210ENST00000637053 G3BP1Q13283 466 aaKnown RBP eCLIP3.43□□□□□ -1.86
VIM-210ENST00000637053 GALEQ14376 348 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 GBX1Q14549 363 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 GRM3Q14832 879 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 SLC9A5Q14940 896 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 INTS11Q5TA45 600 aaKnown RBP3.43□□□□□ -1.86
VIM-210ENST00000637053 MEI1Q5TIA1 1274 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 PRAMEF13Q5VWM6 474 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 NUGGCQ68CJ6 796 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 FAAH2Q6GMR7 532 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 LRFN4Q6PJG9 635 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 ABRAXAS1Q6UWZ7 409 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 BRINP3Q76B58 766 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 FASTKD5Q7L8L6 764 aaKnown RBP3.43□□□□□ -1.86
VIM-210ENST00000637053 STRA8Q7Z7C7 330 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 SDCCAG8Q86SQ7 713 aaPredicted RBP3.43□□□□□ -1.86
VIM-210ENST00000637053 SRLQ86TD4 932 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 TAX1BP1Q86VP1 789 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 TPH2Q8IWU9 490 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 SP8Q8IXZ3 490 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 CEP57L1Q8IYX8 460 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 RTKN2Q8IZC4 609 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 CARNMT1Q8N4J0 409 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 OXR1Q8N573 874 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 LILRB1Q8NHL6 650 aaPredicted RBP3.43□□□□□ -1.86
VIM-210ENST00000637053 PIWIL2Q8TC59 973 aaKnown RBP3.43□□□□□ -1.86
VIM-210ENST00000637053 SPATA18Q8TC71 538 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 MGARPQ8TDB4 240 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 ERCC4Q92889 916 aaPredicted RBP3.43□□□□□ -1.86
VIM-210ENST00000637053 HIC2Q96JB3 615 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 NECAB3Q96P71 396 aaPredicted RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms