RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 NUCKS1Q9H1E3 243 aaKnown RBP12.66□□□□□ -0.38
CLN6-217ENST00000636964 PPP2R3BQ9Y5P8 575 aa12.66□□□□□ -0.38
CLN6-217ENST00000636964 SNCAIPQ9Y6H5 919 aa12.66□□□□□ -0.38
CLN6-217ENST00000636964 DICER1Q9UPY3 1922 aaKnown RBP12.66□□□□□ -0.38
CLN6-217ENST00000636964 RPTORQ8N122 1335 aa12.66□□□□□ -0.38
CLN6-217ENST00000636964 EYA4O95677 639 aa12.66□□□□□ -0.38
CLN6-217ENST00000636964 TFRCP02786 760 aaKnown RBP12.66□□□□□ -0.38
CLN6-217ENST00000636964 TUBB4AP04350 444 aa12.66□□□□□ -0.38
CLN6-217ENST00000636964 ITGB3BPQ13352 177 aaPredicted RBP12.66□□□□□ -0.38
CLN6-217ENST00000636964 MTMR1Q13613 665 aa12.66□□□□□ -0.38
CLN6-217ENST00000636964 MIIPQ5JXC2 388 aa12.66□□□□□ -0.38
CLN6-217ENST00000636964 BEND6Q5SZJ8 279 aaPredicted RBP12.66□□□□□ -0.38
CLN6-217ENST00000636964 CATSPERGQ6ZRH7 1159 aa12.66□□□□□ -0.38
CLN6-217ENST00000636964 PNKPQ96T60 521 aa12.66□□□□□ -0.38
CLN6-217ENST00000636964 PPP2R2CQ9Y2T4 447 aa12.66□□□□□ -0.38
CLN6-217ENST00000636964 A0A0U1RQJ8 604 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 ATP9AO75110 1047 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 TPM1P09493 284 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 KRT9P35527 623 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 TREML2Q5T2D2 321 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 RINT1Q6NUQ1 792 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 FAM114A1Q8IWE2 563 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 ATRIPQ8WXE1 791 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 IRX2Q9BZI1 471 aaPredicted RBP12.65□□□□□ -0.38
CLN6-217ENST00000636964 KDM4CQ9H3R0 1056 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 ZNF214Q9UL59 606 aaPredicted RBP12.65□□□□□ -0.38
CLN6-217ENST00000636964 FAN1Q9Y2M0 1017 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 TTC26A0AVF1 554 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 PRPF6O94906 941 aaKnown RBP12.65□□□□□ -0.38
CLN6-217ENST00000636964 PCNX4Q63HM2 1172 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 MAEAQ7L5Y9 396 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 REPS2Q8NFH8 660 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 FAM210AQ96ND0 272 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 TSG101Q99816 390 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 PDCD2LQ9BRP1 358 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 LXNQ9BS40 222 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 ZSWIM4Q9H7M6 989 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 TUFT1Q9NNX1 390 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 ITIH6Q6UXX5 1313 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 SORBS3O60504 671 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 MYBP10242 640 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 DNM2P50570 870 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 CORO7P57737 925 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 MFSD4BQ5TF39 518 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 RAD9BQ6WBX8 426 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 LRRC55Q6ZSA7 311 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 MIER3Q7Z3K6 550 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 CLMNQ96JQ2 1002 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 C12orf42Q96LP6 360 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 PANX2Q96RD6 677 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 ELP3Q9H9T3 547 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 PXMP2Q9NR77 195 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 UBIAD1Q9Y5Z9 338 aa12.65□□□□□ -0.38
CLN6-217ENST00000636964 KLHL33A6NCF5 533 aa12.64□□□□□ -0.39
CLN6-217ENST00000636964 DHX15O43143 795 aaKnown RBP12.64□□□□□ -0.39
CLN6-217ENST00000636964 SLC26A4O43511 780 aa12.64□□□□□ -0.39
CLN6-217ENST00000636964 PPP1R12BO60237 982 aaPredicted RBP12.64□□□□□ -0.39
CLN6-217ENST00000636964 LRRC63Q05C16 580 aa12.64□□□□□ -0.39
CLN6-217ENST00000636964 TTLL12Q14166 644 aaPredicted RBP12.64□□□□□ -0.39
CLN6-217ENST00000636964 C1QTNF12Q5T7M4 302 aa12.64□□□□□ -0.39
CLN6-217ENST00000636964 GPIHBP1Q8IV16 184 aa12.64□□□□□ -0.39
CLN6-217ENST00000636964 CNGA4Q8IV77 575 aa12.64□□□□□ -0.39
CLN6-217ENST00000636964 CCDC155Q8N6L0 562 aa12.64□□□□□ -0.39
CLN6-217ENST00000636964 RABGGTAQ92696 567 aa12.64□□□□□ -0.39
CLN6-217ENST00000636964 IKZF4Q9H2S9 585 aa12.64□□□□□ -0.39
CLN6-217ENST00000636964 MRPL44Q9H9J2 332 aaKnown RBP12.64□□□□□ -0.39
CLN6-217ENST00000636964 AGO4Q9HCK5 861 aaKnown RBP12.64□□□□□ -0.39
CLN6-217ENST00000636964 JADE2Q9NQC1 790 aa12.64□□□□□ -0.39
CLN6-217ENST00000636964 STK24Q9Y6E0 443 aa12.64□□□□□ -0.39
CLN6-217ENST00000636964 PITPNM2Q9BZ72 1349 aa12.64□□□□□ -0.39
CLN6-217ENST00000636964 FRMD3A2A2Y4 597 aa12.64□□□□□ -0.39
CLN6-217ENST00000636964 SPDYE16A6NNV3 312 aaPredicted RBP12.64□□□□□ -0.39
CLN6-217ENST00000636964 TBCAO75347 108 aaKnown RBP12.64□□□□□ -0.39
CLN6-217ENST00000636964 KCNA1Q09470 495 aa12.64□□□□□ -0.39
CLN6-217ENST00000636964 EPHA7Q15375 998 aa12.64□□□□□ -0.39
CLN6-217ENST00000636964 CCDC91Q7Z6B0 441 aa12.64□□□□□ -0.39
CLN6-217ENST00000636964 OTUD5Q96G74 571 aa12.64□□□□□ -0.39
CLN6-217ENST00000636964 RIT2Q99578 217 aa12.64□□□□□ -0.39
CLN6-217ENST00000636964 ABHD10Q9NUJ1 306 aa12.64□□□□□ -0.39
CLN6-217ENST00000636964 CSADQ9Y600 493 aa12.64□□□□□ -0.39
CLN6-217ENST00000636964 COL11A1P12107 1806 aaPredicted RBP12.64□□□□□ -0.39
CLN6-217ENST00000636964 TMEM150BA6NC51 233 aa12.64□□□□□ -0.39
CLN6-217ENST00000636964 PAX7P23759 505 aa12.64□□□□□ -0.39
CLN6-217ENST00000636964 ZCWPW2Q504Y3 356 aa12.64□□□□□ -0.39
CLN6-217ENST00000636964 KSR1Q8IVT5 923 aa12.64□□□□□ -0.39
CLN6-217ENST00000636964 DEF6Q9H4E7 631 aa12.64□□□□□ -0.39
CLN6-217ENST00000636964 AGPAT5Q9NUQ2 364 aa12.64□□□□□ -0.39
CLN6-217ENST00000636964 RASSF10A6NK89 507 aa12.63□□□□□ -0.39
CLN6-217ENST00000636964 CAND2O75155 1236 aa12.63□□□□□ -0.39
CLN6-217ENST00000636964 GCNT3O95395 438 aa12.63□□□□□ -0.39
CLN6-217ENST00000636964 TRIM21P19474 475 aaKnown RBP12.63□□□□□ -0.39
CLN6-217ENST00000636964 GNG11P61952 73 aa12.63□□□□□ -0.39
CLN6-217ENST00000636964 FKBP3Q00688 224 aaKnown RBP12.63□□□□□ -0.39
CLN6-217ENST00000636964 EAPPQ56P03 285 aaPredicted RBP12.63□□□□□ -0.39
CLN6-217ENST00000636964 NOL9Q5SY16 702 aaKnown RBP12.63□□□□□ -0.39
CLN6-217ENST00000636964 B3GNT9Q6UX72 402 aa12.63□□□□□ -0.39
CLN6-217ENST00000636964 GADL1Q6ZQY3 521 aa12.63□□□□□ -0.39
CLN6-217ENST00000636964 MYCT1Q8N699 235 aa12.63□□□□□ -0.39
CLN6-217ENST00000636964 CHP1Q99653 195 aa12.63□□□□□ -0.39
CLN6-217ENST00000636964 NDST4Q9H3R1 872 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms