RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 ATP11BQ9Y2G3 1177 aa17.88■□□□□ 0.45
CLN6-216ENST00000636876 TRIP12Q14669 1992 aaPredicted RBP17.88■□□□□ 0.45
CLN6-216ENST00000636876 PQBP1O60828 265 aaKnown RBP17.87■□□□□ 0.45
CLN6-216ENST00000636876 NPEPPSP55786 919 aa17.87■□□□□ 0.45
CLN6-216ENST00000636876 IGBP1P78318 339 aa17.87■□□□□ 0.45
CLN6-216ENST00000636876 ZNF200P98182 395 aaPredicted RBP17.87■□□□□ 0.45
CLN6-216ENST00000636876 TLE2Q04725 743 aa17.87■□□□□ 0.45
CLN6-216ENST00000636876 KARSQ15046 597 aaKnown RBP17.87■□□□□ 0.45
CLN6-216ENST00000636876 MTERF2Q49AM1 385 aa17.87■□□□□ 0.45
CLN6-216ENST00000636876 RESP18Q5W5W9 173 aa17.87■□□□□ 0.45
CLN6-216ENST00000636876 ADALQ6DHV7 355 aa17.87■□□□□ 0.45
CLN6-216ENST00000636876 CLEC17AQ6ZS10 378 aa17.87■□□□□ 0.45
CLN6-216ENST00000636876 FAM126BQ8IXS8 530 aa17.87■□□□□ 0.45
CLN6-216ENST00000636876 KCTD17Q8N5Z5 321 aa17.87■□□□□ 0.45
CLN6-216ENST00000636876 PIGOQ8TEQ8 1089 aa17.87■□□□□ 0.45
CLN6-216ENST00000636876 TOX2Q96NM4 488 aa17.87■□□□□ 0.45
CLN6-216ENST00000636876 TRPV6Q9H1D0 765 aa17.87■□□□□ 0.45
CLN6-216ENST00000636876 DBR1Q9UK59 544 aaKnown RBP17.87■□□□□ 0.45
CLN6-216ENST00000636876 A0A087WWV3 80 aa17.86■□□□□ 0.45
CLN6-216ENST00000636876 MBLAC1A4D2B0 266 aaPredicted RBP17.86■□□□□ 0.45
CLN6-216ENST00000636876 TLR3O15455 904 aaKnown RBP17.86■□□□□ 0.45
CLN6-216ENST00000636876 B4GALT4O60513 344 aa17.86■□□□□ 0.45
CLN6-216ENST00000636876 CD4P01730 458 aa17.86■□□□□ 0.45
CLN6-216ENST00000636876 PLCG1P19174 1290 aa17.86■□□□□ 0.45
CLN6-216ENST00000636876 PTGISQ16647 500 aa17.86■□□□□ 0.45
CLN6-216ENST00000636876 CSPP1Q1MSJ5 1256 aa17.86■□□□□ 0.45
CLN6-216ENST00000636876 XKR9Q5GH70 373 aa17.86■□□□□ 0.45
CLN6-216ENST00000636876 MARCH8Q5T0T0 291 aa17.86■□□□□ 0.45
CLN6-216ENST00000636876 KCNK18Q7Z418 384 aa17.86■□□□□ 0.45
CLN6-216ENST00000636876 RASSF8Q8NHQ8 419 aa17.86■□□□□ 0.45
CLN6-216ENST00000636876 CEP170P1Q96L14 293 aa17.86■□□□□ 0.45
CLN6-216ENST00000636876 CTAGE1Q96RT6 745 aa17.86■□□□□ 0.45
CLN6-216ENST00000636876 CEP89Q96ST8 783 aa17.86■□□□□ 0.45
CLN6-216ENST00000636876 PLIN2Q99541 437 aa17.86■□□□□ 0.45
CLN6-216ENST00000636876 HTATIP2Q9BUP3 242 aa17.86■□□□□ 0.45
CLN6-216ENST00000636876 CYP26B1Q9NR63 512 aa17.86■□□□□ 0.45
CLN6-216ENST00000636876 TRMT13Q9NUP7 481 aaKnown RBP17.86■□□□□ 0.45
CLN6-216ENST00000636876 TUBE1Q9UJT0 475 aa17.86■□□□□ 0.45
CLN6-216ENST00000636876 DNM3Q9UQ16 869 aa17.86■□□□□ 0.45
CLN6-216ENST00000636876 PPME1Q9Y570 386 aa17.86■□□□□ 0.45
CLN6-216ENST00000636876 A0A1W2PQ27 194 aa17.85■□□□□ 0.45
CLN6-216ENST00000636876 A0A1W2PQ64 194 aa17.85■□□□□ 0.45
CLN6-216ENST00000636876 A0A1W2PQD8 194 aa17.85■□□□□ 0.45
CLN6-216ENST00000636876 DCDC2CA8MYV0 355 aa17.85■□□□□ 0.45
CLN6-216ENST00000636876 TREHO43280 583 aa17.85■□□□□ 0.45
CLN6-216ENST00000636876 C22orf31O95567 290 aa17.85■□□□□ 0.45
CLN6-216ENST00000636876 CMA1P23946 247 aa17.85■□□□□ 0.45
CLN6-216ENST00000636876 KLRC1P26715 233 aa17.85■□□□□ 0.45
CLN6-216ENST00000636876 RARRES1P49788 294 aa17.85■□□□□ 0.45
CLN6-216ENST00000636876 HABP4Q5JVS0 413 aaKnown RBP17.85■□□□□ 0.45
CLN6-216ENST00000636876 ALPK3Q96L96 1907 aa17.85■□□□□ 0.45
CLN6-216ENST00000636876 CCDC43Q96MW1 224 aaKnown RBP17.85■□□□□ 0.45
CLN6-216ENST00000636876 SH2D3AQ9BRG2 576 aa17.85■□□□□ 0.45
CLN6-216ENST00000636876 FAM13BQ9NYF5 915 aa17.85■□□□□ 0.45
CLN6-216ENST00000636876 CCDC39Q9UFE4 941 aa17.85■□□□□ 0.45
CLN6-216ENST00000636876 NOD1Q9Y239 953 aa17.85■□□□□ 0.45
CLN6-216ENST00000636876 A0A087X0B3 334 aa17.84■□□□□ 0.45
CLN6-216ENST00000636876 ARHGEF35A5YM69 484 aa17.84■□□□□ 0.45
CLN6-216ENST00000636876 E9PMD0 336 aa17.84■□□□□ 0.45
CLN6-216ENST00000636876 EYA4O95677 639 aa17.84■□□□□ 0.45
CLN6-216ENST00000636876 TBC1D8BQ0IIM8 1120 aa17.84■□□□□ 0.45
CLN6-216ENST00000636876 MTHFD1LQ6UB35 978 aa17.84■□□□□ 0.45
CLN6-216ENST00000636876 SERINC5Q86VE9 423 aa17.84■□□□□ 0.45
CLN6-216ENST00000636876 TMEM87AQ8NBN3 555 aa17.84■□□□□ 0.45
CLN6-216ENST00000636876 LRRC15Q8TF66 581 aa17.84■□□□□ 0.45
CLN6-216ENST00000636876 ZBTB10Q96DT7 871 aa17.84■□□□□ 0.45
CLN6-216ENST00000636876 ARID2Q68CP9 1835 aa17.84■□□□□ 0.45
CLN6-216ENST00000636876 LOXHD1Q8IVV2 1947 aa17.83■□□□□ 0.44
CLN6-216ENST00000636876 MAGEB2O15479 319 aa17.83■□□□□ 0.44
CLN6-216ENST00000636876 RFC5P40937 340 aa17.83■□□□□ 0.44
CLN6-216ENST00000636876 FAAP100Q0VG06 881 aa17.83■□□□□ 0.44
CLN6-216ENST00000636876 PTK7Q13308 1070 aa17.83■□□□□ 0.44
CLN6-216ENST00000636876 RRAGBQ5VZM2 374 aa17.83■□□□□ 0.44
CLN6-216ENST00000636876 RUFY4Q6ZNE9 571 aa17.83■□□□□ 0.44
CLN6-216ENST00000636876 CCDC73Q6ZRK6 1079 aa17.83■□□□□ 0.44
CLN6-216ENST00000636876 DHX38Q92620 1227 aaKnown RBP17.83■□□□□ 0.44
CLN6-216ENST00000636876 PANK2Q9BZ23 570 aa17.83■□□□□ 0.44
CLN6-216ENST00000636876 BHMT2Q9H2M3 363 aa17.83■□□□□ 0.44
CLN6-216ENST00000636876 BLOC1S4Q9NUP1 217 aa17.83■□□□□ 0.44
CLN6-216ENST00000636876 STK17AQ9UEE5 414 aa17.83■□□□□ 0.44
CLN6-216ENST00000636876 PCDHA2Q9Y5H9 948 aa17.83■□□□□ 0.44
CLN6-216ENST00000636876 GOLGA6L4A6NEF3 574 aa17.82■□□□□ 0.44
CLN6-216ENST00000636876 MAFO75444 373 aaPredicted RBP17.82■□□□□ 0.44
CLN6-216ENST00000636876 CYP2C9P11712 490 aa17.82■□□□□ 0.44
CLN6-216ENST00000636876 PFKFB1P16118 471 aa17.82■□□□□ 0.44
CLN6-216ENST00000636876 TAF2Q6P1X5 1199 aa17.82■□□□□ 0.44
CLN6-216ENST00000636876 EXOC8Q8IYI6 725 aa17.82■□□□□ 0.44
CLN6-216ENST00000636876 PDILTQ8N807 584 aa17.82■□□□□ 0.44
CLN6-216ENST00000636876 FSIP1Q8NA03 581 aa17.82■□□□□ 0.44
CLN6-216ENST00000636876 MRPS27Q92552 414 aaKnown RBP17.82■□□□□ 0.44
CLN6-216ENST00000636876 RAD54LQ92698 747 aa17.82■□□□□ 0.44
CLN6-216ENST00000636876 GBP4Q96PP9 640 aa17.82■□□□□ 0.44
CLN6-216ENST00000636876 JPH2Q9BR39 696 aaPredicted RBP17.82■□□□□ 0.44
CLN6-216ENST00000636876 DHX33Q9H6R0 707 aaKnown RBP17.82■□□□□ 0.44
CLN6-216ENST00000636876 KCNH3Q9ULD8 1083 aa17.82■□□□□ 0.44
CLN6-216ENST00000636876 EVPLQ92817 2033 aa17.81■□□□□ 0.44
CLN6-216ENST00000636876 IGKV6-21A0A0C4DH24 114 aa17.81■□□□□ 0.44
CLN6-216ENST00000636876 FAM237AA0A1B0GTK4 181 aa17.81■□□□□ 0.44
CLN6-216ENST00000636876 A0A1B0GVL5 298 aa17.81■□□□□ 0.44
CLN6-216ENST00000636876 SMIM35A0A1B0GVV1 85 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms