RNA–Protein interactions for RNA: ENST00000636861.1

CHD2-225, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 146 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-225ENST00000636861 NECAB2Q7Z6G3 386 aa4.38□□□□□ -1.71
CHD2-225ENST00000636861 TMEM110Q86TL2 294 aa4.38□□□□□ -1.71
CHD2-225ENST00000636861 FAM228AQ86W67 206 aa4.38□□□□□ -1.71
CHD2-225ENST00000636861 RAB11FIP4Q86YS3 637 aa4.38□□□□□ -1.71
CHD2-225ENST00000636861 SLF2Q8IX21 1173 aa4.38□□□□□ -1.71
CHD2-225ENST00000636861 ALDH16A1Q8IZ83 802 aa4.38□□□□□ -1.71
CHD2-225ENST00000636861 CRACR2BQ8N4Y2 399 aaPredicted RBP4.38□□□□□ -1.71
CHD2-225ENST00000636861 CNBD1Q8NA66 436 aa4.38□□□□□ -1.71
CHD2-225ENST00000636861 RETREG2Q8NC44 543 aa4.38□□□□□ -1.71
CHD2-225ENST00000636861 OTUD7AQ8TE49 926 aaPredicted RBP4.38□□□□□ -1.71
CHD2-225ENST00000636861 USP33Q8TEY7 942 aa4.38□□□□□ -1.71
CHD2-225ENST00000636861 SREK1Q8WXA9 508 aaKnown RBP4.38□□□□□ -1.71
CHD2-225ENST00000636861 CTNNBL1Q8WYA6 563 aaPredicted RBP4.38□□□□□ -1.71
CHD2-225ENST00000636861 CCT6BQ92526 530 aa4.38□□□□□ -1.71
CHD2-225ENST00000636861 EVI5LQ96CN4 794 aa4.38□□□□□ -1.71
CHD2-225ENST00000636861 HAUS1Q96CS2 278 aa4.38□□□□□ -1.71
CHD2-225ENST00000636861 ITPKCQ96DU7 683 aa4.38□□□□□ -1.71
CHD2-225ENST00000636861 CHMP6Q96FZ7 201 aa4.38□□□□□ -1.71
CHD2-225ENST00000636861 DHTKD1Q96HY7 919 aaPredicted RBP4.38□□□□□ -1.71
CHD2-225ENST00000636861 NDNQ99608 321 aa4.38□□□□□ -1.71
CHD2-225ENST00000636861 SH3GL1Q99961 368 aa4.38□□□□□ -1.71
CHD2-225ENST00000636861 SLF1Q9BQI6 1058 aa4.38□□□□□ -1.71
CHD2-225ENST00000636861 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.38□□□□□ -1.71
CHD2-225ENST00000636861 CARD14Q9BXL6 1004 aa4.38□□□□□ -1.71
CHD2-225ENST00000636861 CARD9Q9H257 536 aa4.38□□□□□ -1.71
CHD2-225ENST00000636861 NDST4Q9H3R1 872 aa4.38□□□□□ -1.71
CHD2-225ENST00000636861 ZNF576Q9H609 170 aa4.38□□□□□ -1.71
CHD2-225ENST00000636861 MRPL44Q9H9J2 332 aaKnown RBP4.38□□□□□ -1.71
CHD2-225ENST00000636861 PARVBQ9HBI1 364 aa4.38□□□□□ -1.71
CHD2-225ENST00000636861 GGA3Q9NZ52 723 aa4.38□□□□□ -1.71
CHD2-225ENST00000636861 SUCLA2Q9P2R7 463 aaPredicted RBP4.38□□□□□ -1.71
CHD2-225ENST00000636861 STOML1Q9UBI4 398 aa4.38□□□□□ -1.71
CHD2-225ENST00000636861 HDAC6Q9UBN7 1215 aa4.38□□□□□ -1.71
CHD2-225ENST00000636861 DKK3Q9UBP4 350 aa4.38□□□□□ -1.71
CHD2-225ENST00000636861 NARFQ9UHQ1 456 aa4.38□□□□□ -1.71
CHD2-225ENST00000636861 BZW2Q9Y6E2 419 aaKnown RBP4.38□□□□□ -1.71
CHD2-225ENST00000636861 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.38□□□□□ -1.71
CHD2-225ENST00000636861 SCN9AQ15858 1988 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 A0A1B0GTH6 734 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 TMEM221A6NGB7 291 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 BTBD19C9JJ37 291 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 APBB1O00213 710 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 SPTLC2O15270 562 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 FANCGO15287 622 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 P4HA2O15460 535 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 PPIP5K2O43314 1243 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 ORC4O43929 436 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 PPP6R2O75170 966 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 MBD4O95243 580 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 LARGE1O95461 756 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 HNRNPCP07910 306 aaKnown RBP eCLIP4.37□□□□□ -1.714e-9■■■□□ 18.3
CHD2-225ENST00000636861 MSL3P1P0C860 447 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 SP100P23497 879 aaPredicted RBP4.37□□□□□ -1.71
CHD2-225ENST00000636861 GJA5P36382 358 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 HSPA9P38646 679 aaKnown RBP4.37□□□□□ -1.71
CHD2-225ENST00000636861 SYKP43405 635 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 CD97P48960 835 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 ATP1A2P50993 1020 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 CLCN2P51788 898 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 TNNC1P63316 161 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 ITGB3BPQ13352 177 aaPredicted RBP4.37□□□□□ -1.71
CHD2-225ENST00000636861 CUL1Q13616 776 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 SEPT6Q14141 434 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 CCDC153Q494R4 210 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 ACCSLQ4AC99 568 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 PABPC1LQ4VXU2 614 aaKnown RBP4.37□□□□□ -1.71
CHD2-225ENST00000636861 ODF2Q5BJF6 829 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 TTMPQ5BVD1 217 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 CREB3L3Q68CJ9 461 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 CCDC102BQ68D86 513 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 GRAMD4Q6IC98 578 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 TMEM154Q6P9G4 183 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 UNC13DQ70J99 1090 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 ERICH1Q86X53 443 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 LRRC49Q8IUZ0 686 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 PASD1Q8IV76 773 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 CROCCP3Q8IVE0 287 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 PEX5LQ8IYB4 626 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.37□□□□□ -1.71
CHD2-225ENST00000636861 ST13P4Q8IZP2 240 aaPredicted RBP4.37□□□□□ -1.71
CHD2-225ENST00000636861 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.37□□□□□ -1.71
CHD2-225ENST00000636861 NOA1Q8NC60 698 aaKnown RBP4.37□□□□□ -1.71
CHD2-225ENST00000636861 PPP1R14CQ8TAE6 165 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 AGAP11Q8TF27 550 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 RIN2Q8WYP3 895 aaPredicted RBP4.37□□□□□ -1.71
CHD2-225ENST00000636861 PTPRN2Q92932 1015 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 LENG1Q96BZ8 264 aaPredicted RBP4.37□□□□□ -1.71
CHD2-225ENST00000636861 HIC2Q96JB3 615 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 CDK5RAP3Q96JB5 506 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 C8orf76Q96K31 380 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 RNPC3Q96LT9 517 aaKnown RBP4.37□□□□□ -1.71
CHD2-225ENST00000636861 ZIM3Q96PE6 472 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 DEFB118Q96PH6 123 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 NR1H4Q96RI1 486 aaPredicted RBP4.37□□□□□ -1.71
CHD2-225ENST00000636861 CDC5LQ99459 802 aaKnown RBP4.37□□□□□ -1.71
CHD2-225ENST00000636861 PYM1Q9BRP8 204 aaKnown RBP4.37□□□□□ -1.71
CHD2-225ENST00000636861 DESI2Q9BSY9 194 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 OSBPL7Q9BZF2 842 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 PHACTR1Q9C0D0 580 aa4.37□□□□□ -1.71
CHD2-225ENST00000636861 BRD8Q9H0E9 1235 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms