RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 ITGB3BPQ13352 177 aaPredicted RBP14.3□□□□□ -0.12
CTSD-208ENST00000636843 NAALADL2Q58DX5 795 aa14.3□□□□□ -0.12
CTSD-208ENST00000636843 TYW1BQ6NUM6 668 aa14.3□□□□□ -0.12
CTSD-208ENST00000636843 POTEBQ6S5H4 581 aa14.3□□□□□ -0.12
CTSD-208ENST00000636843 NIPA1Q7RTP0 329 aa14.3□□□□□ -0.12
CTSD-208ENST00000636843 RTN4RL1Q86UN2 441 aaPredicted RBP14.3□□□□□ -0.12
CTSD-208ENST00000636843 CRIPAKQ8N1N5 446 aa14.3□□□□□ -0.12
CTSD-208ENST00000636843 LINC01599Q8WXQ3 324 aa14.3□□□□□ -0.12
CTSD-208ENST00000636843 P2RX5Q93086 422 aa14.3□□□□□ -0.12
CTSD-208ENST00000636843 ZBTB10Q96DT7 871 aa14.3□□□□□ -0.12
CTSD-208ENST00000636843 CELF4Q9BZC1 486 aaKnown RBP14.3□□□□□ -0.12
CTSD-208ENST00000636843 BARHL2Q9NY43 387 aa14.3□□□□□ -0.12
CTSD-208ENST00000636843 PADI3Q9ULW8 664 aa14.3□□□□□ -0.12
CTSD-208ENST00000636843 IGSF9BQ9UPX0 1349 aa14.3□□□□□ -0.12
CTSD-208ENST00000636843 KDM3AQ9Y4C1 1321 aa14.3□□□□□ -0.12
CTSD-208ENST00000636843 NLRC5Q86WI3 1866 aa14.29□□□□□ -0.12
CTSD-208ENST00000636843 SMCO2A6NFE2 343 aa14.29□□□□□ -0.12
CTSD-208ENST00000636843 PRR33A8MZF0 331 aa14.29□□□□□ -0.12
CTSD-208ENST00000636843 HBP1O60381 514 aa14.29□□□□□ -0.12
CTSD-208ENST00000636843 MMP1P03956 469 aa14.29□□□□□ -0.12
CTSD-208ENST00000636843 ZNF76P36508 570 aa14.29□□□□□ -0.12
CTSD-208ENST00000636843 RCAN1P53805 252 aa14.29□□□□□ -0.12
CTSD-208ENST00000636843 HYAL1Q12794 435 aa14.29□□□□□ -0.12
CTSD-208ENST00000636843 PAK2Q13177 524 aa14.29□□□□□ -0.12
CTSD-208ENST00000636843 TRAPPC12Q8WVT3 735 aa14.29□□□□□ -0.12
CTSD-208ENST00000636843 PGBD1Q96JS3 809 aa14.29□□□□□ -0.12
CTSD-208ENST00000636843 LMBRD1Q9NUN5 540 aa14.29□□□□□ -0.12
CTSD-208ENST00000636843 BRPF3Q9ULD4 1205 aa14.29□□□□□ -0.12
CTSD-208ENST00000636843 TCHHQ07283 1943 aa14.29□□□□□ -0.12
CTSD-208ENST00000636843 IGKV6D-21A0A0A0MT36 114 aa14.28□□□□□ -0.12
CTSD-208ENST00000636843 GOLGA8AA7E2F4 631 aa14.28□□□□□ -0.12
CTSD-208ENST00000636843 GOLGA8BA8MQT2 603 aa14.28□□□□□ -0.12
CTSD-208ENST00000636843 LARGE1O95461 756 aa14.28□□□□□ -0.12
CTSD-208ENST00000636843 SCG2P13521 617 aa14.28□□□□□ -0.12
CTSD-208ENST00000636843 LTBRP36941 435 aa14.28□□□□□ -0.12
CTSD-208ENST00000636843 CLK2P49760 499 aaKnown RBP14.28□□□□□ -0.12
CTSD-208ENST00000636843 KRT76Q01546 638 aa14.28□□□□□ -0.12
CTSD-208ENST00000636843 ZP2Q05996 745 aa14.28□□□□□ -0.12
CTSD-208ENST00000636843 ME3Q16798 604 aa14.28□□□□□ -0.12
CTSD-208ENST00000636843 FAM160B1Q5W0V3 765 aa14.28□□□□□ -0.12
CTSD-208ENST00000636843 MTHFD1LQ6UB35 978 aa14.28□□□□□ -0.12
CTSD-208ENST00000636843 CCDC83Q8IWF9 413 aa14.28□□□□□ -0.12
CTSD-208ENST00000636843 ADHFE1Q8IWW8 467 aa14.28□□□□□ -0.12
CTSD-208ENST00000636843 PPP2R3CQ969Q6 453 aa14.28□□□□□ -0.12
CTSD-208ENST00000636843 PLAGL2Q9UPG8 496 aa14.28□□□□□ -0.12
CTSD-208ENST00000636843 MRPL42Q9Y6G3 142 aaKnown RBP14.28□□□□□ -0.12
CTSD-208ENST00000636843 GOLGA6L3A6NEY3 463 aa14.27□□□□□ -0.12
CTSD-208ENST00000636843 C19orf67A6NJJ6 358 aa14.27□□□□□ -0.12
CTSD-208ENST00000636843 DCXO43602 365 aa14.27□□□□□ -0.12
CTSD-208ENST00000636843 KLRC1P26715 233 aa14.27□□□□□ -0.12
CTSD-208ENST00000636843 TMEM62Q0P6H9 643 aa14.27□□□□□ -0.12
CTSD-208ENST00000636843 ODR4Q5SWX8 454 aa14.27□□□□□ -0.12
CTSD-208ENST00000636843 MCTP2Q6DN12 878 aa14.27□□□□□ -0.12
CTSD-208ENST00000636843 ABHD15Q6UXT9 468 aa14.27□□□□□ -0.12
CTSD-208ENST00000636843 ATP8B4Q8TF62 1192 aa14.27□□□□□ -0.12
CTSD-208ENST00000636843 GZF1Q9H116 711 aaPredicted RBP14.27□□□□□ -0.12
CTSD-208ENST00000636843 ALG13Q9NP73 1137 aaKnown RBP14.27□□□□□ -0.12
CTSD-208ENST00000636843 FAM217BQ9NTX9 383 aaPredicted RBP14.27□□□□□ -0.12
CTSD-208ENST00000636843 RNF216Q9NWF9 866 aaPredicted RBP14.27□□□□□ -0.12
CTSD-208ENST00000636843 TPCN1Q9ULQ1 816 aa14.27□□□□□ -0.12
CTSD-208ENST00000636843 COL1A2P08123 1366 aa14.26□□□□□ -0.13
CTSD-208ENST00000636843 KLF18A0A0U1RQI7 1052 aa14.26□□□□□ -0.13
CTSD-208ENST00000636843 FSD2A1L4K1 749 aa14.26□□□□□ -0.13
CTSD-208ENST00000636843 BACH1O14867 736 aa14.26□□□□□ -0.13
CTSD-208ENST00000636843 STX6O43752 255 aa14.26□□□□□ -0.13
CTSD-208ENST00000636843 CCNE2O96020 404 aa14.26□□□□□ -0.13
CTSD-208ENST00000636843 CYP3A4P08684 503 aa14.26□□□□□ -0.13
CTSD-208ENST00000636843 HOXD11P31277 338 aaPredicted RBP14.26□□□□□ -0.13
CTSD-208ENST00000636843 CAMK1Q14012 370 aa14.26□□□□□ -0.13
CTSD-208ENST00000636843 TOB2Q14106 344 aaPredicted RBP14.26□□□□□ -0.13
CTSD-208ENST00000636843 SMAD2Q15796 467 aaKnown RBP14.26□□□□□ -0.13
CTSD-208ENST00000636843 ZNF484Q5JVG2 852 aa14.26□□□□□ -0.13
CTSD-208ENST00000636843 MIS18BP1Q6P0N0 1132 aa14.26□□□□□ -0.13
CTSD-208ENST00000636843 PLA2G4DQ86XP0 818 aa14.26□□□□□ -0.13
CTSD-208ENST00000636843 SPPL3Q8TCT6 385 aa14.26□□□□□ -0.13
CTSD-208ENST00000636843 TCEANC2Q96MN5 208 aa14.26□□□□□ -0.13
CTSD-208ENST00000636843 TMEM260Q9NX78 707 aa14.26□□□□□ -0.13
CTSD-208ENST00000636843 LRFN2Q9ULH4 789 aa14.26□□□□□ -0.13
CTSD-208ENST00000636843 ATP6V1DQ9Y5K8 247 aa14.26□□□□□ -0.13
CTSD-208ENST00000636843 CCDC196A0A1B0GTZ2 297 aa14.25□□□□□ -0.13
CTSD-208ENST00000636843 ITGB1P05556 798 aa14.25□□□□□ -0.13
CTSD-208ENST00000636843 ZSCAN22P10073 491 aaPredicted RBP14.25□□□□□ -0.13
CTSD-208ENST00000636843 GJB2P29033 226 aa14.25□□□□□ -0.13
CTSD-208ENST00000636843 CDC27P30260 824 aa14.25□□□□□ -0.13
CTSD-208ENST00000636843 SARSP49591 514 aaKnown RBP14.25□□□□□ -0.13
CTSD-208ENST00000636843 NFX1Q12986 1120 aaKnown RBP14.25□□□□□ -0.13
CTSD-208ENST00000636843 ADAM15Q13444 863 aa14.25□□□□□ -0.13
CTSD-208ENST00000636843 PAN2Q504Q3 1202 aaKnown RBP14.25□□□□□ -0.13
CTSD-208ENST00000636843 PDXDC2PQ6P474 469 aa14.25□□□□□ -0.13
CTSD-208ENST00000636843 KIAA0319LQ8IZA0 1049 aa14.25□□□□□ -0.13
CTSD-208ENST00000636843 POP1Q99575 1024 aaKnown RBP14.25□□□□□ -0.13
CTSD-208ENST00000636843 LARP6Q9BRS8 491 aaKnown RBP14.25□□□□□ -0.13
CTSD-208ENST00000636843 TMX1Q9H3N1 280 aa14.25□□□□□ -0.13
CTSD-208ENST00000636843 IGFLR1Q9H665 355 aa14.25□□□□□ -0.13
CTSD-208ENST00000636843 ZNF302Q9NR11 478 aa14.25□□□□□ -0.13
CTSD-208ENST00000636843 PCDHB7Q9Y5E2 793 aa14.25□□□□□ -0.13
CTSD-208ENST00000636843 ESYT2A0FGR8 921 aa14.25□□□□□ -0.13
CTSD-208ENST00000636843 FAM86B1E9PN63 330 aa14.25□□□□□ -0.13
CTSD-208ENST00000636843 DDX39AO00148 427 aaKnown RBP14.25□□□□□ -0.13
CTSD-208ENST00000636843 IPO5O00410 1097 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms