RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 METTL3Q86U44 580 aaKnown RBP-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 DZIP3Q86Y13 1208 aaKnown RBP-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 SPATA2LQ8IUW3 424 aaPredicted RBP-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 ZNF295-AS1Q8N0V1 137 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 D2HGDHQ8N465 521 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 TTLL6Q8N841 843 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 KYQ8NBH2 561 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 PCSK9Q8NBP7 692 aaKnown RBP-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 B4GALNT2Q8NHY0 566 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 LMO3Q8TAP4 145 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 ADAM32Q8TC27 787 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 RHPN1Q8TCX5 695 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 ZCCHC13Q8WW36 166 aaKnown RBP-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 ALG3Q92685 438 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 ATP2A3Q93084 1043 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 RUNDC1Q96C34 613 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 DNAJA3Q96EY1 480 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 IFT43Q96FT9 208 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 MED30Q96HR3 178 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 EAF1Q96JC9 268 aaPredicted RBP-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 HSH2DQ96JZ2 352 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 KLHL32Q96NJ5 620 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 CAMK1GQ96NX5 476 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 GORASP1Q9BQQ3 440 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 PLCD4Q9BRC7 762 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 SELENOOQ9BVL4 669 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 PLA2G12BQ9BX93 195 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 RMI1Q9H9A7 625 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 ZNF556Q9HAH1 456 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 TCF7L1Q9HCS4 588 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 CYTL1Q9NRR1 136 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 TRNAU1APQ9NX07 287 aaKnown RBP-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 SLC17A6Q9P2U8 582 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 DUSP13Q9UII6 198 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 FBXO3Q9UK99 471 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 PPP1R9AQ9ULJ8 1098 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 GAB2Q9UQC2 676 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 PTPN22Q9Y2R2 807 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 SLC4A7Q9Y6M7 1214 aa-0.64□□□□□ -2.51
CDKL5-210ENST00000636046 HSPG2P98160 4391 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 CROCCQ5TZA2 2017 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 SPDYE5A6NIY4 337 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 LINC01548A6NM66 108 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 EML1O00423 815 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 TPP1O14773 563 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 EDIL3O43854 480 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 CBX7O95931 251 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 TOMM40O96008 361 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 FGBP02675 491 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 FDX1P10109 184 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 CYP2C8P10632 490 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 HCLS1P14317 486 aaPredicted RBP-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 GATA1P15976 413 aaPredicted RBP-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 PRKCAP17252 672 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 LAG3P18627 525 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 RASA1P20936 1047 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 GPD1P21695 349 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 CERS1P27544 350 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 ALDH1B1P30837 517 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 IL13P35225 146 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 RPS19P39019 145 aaKnown RBP-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 PSMD8P48556 350 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 MAN2A2P49641 1150 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 GZMKP49863 264 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 RTP1P59025 263 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 RBM6P78332 1123 aaKnown RBP-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 HTRA4P83105 476 aaPredicted RBP-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 PRR5P85299 388 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 CACNB2Q08289 660 aaPredicted RBP-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 MPP3Q13368 585 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 PDIA6Q15084 440 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 UBE3CQ15386 1083 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 UGP2Q16851 508 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 ZNF568Q3ZCX4 644 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 RABL3Q5HYI8 236 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 LDLRAD1Q5T700 205 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 KPRPQ5T749 579 aaPredicted RBP-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 WSCD1Q658N2 575 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 FCRLBQ6BAA4 426 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 TTLL5Q6EMB2 1281 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 VASNQ6EMK4 673 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 GALNT18Q6P9A2 607 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 LAYNQ6UX15 382 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 DSTYKQ6XUX3 929 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 ZNF782Q6ZMW2 699 aaPredicted RBP-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 LINC00336Q6ZUF6 198 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 BTLAQ7Z6A9 289 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 ADGRE4PQ86SQ3 457 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 RSPH3Q86UC2 560 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 LRRTM1Q86UE6 522 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 CDH24Q86UP0 819 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 DTX2Q86UW9 622 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 STK32CQ86UX6 486 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 CDC20BQ86Y33 519 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 CCDC125Q86Z20 511 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 TICAM1Q8IUC6 712 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 ERC1Q8IUD2 1116 aa-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 PHF6Q8IWS0 365 aaKnown RBP eCLIP-0.65□□□□□ -2.51
CDKL5-210ENST00000636046 IFNL2Q8IZJ0 200 aa-0.65□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms