RNA–Protein interactions for RNA: ENST00000635994.1

GABRB3-218, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,192 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-218ENST00000635994 ECT2Q9H8V3 914 aa6.78□□□□□ -1.32
GABRB3-218ENST00000635994 ATP6V0A4Q9HBG4 840 aa6.78□□□□□ -1.32
GABRB3-218ENST00000635994 FEM1BQ9UK73 627 aa6.78□□□□□ -1.32
GABRB3-218ENST00000635994 PCDHA4Q9UN74 947 aa6.78□□□□□ -1.32
GABRB3-218ENST00000635994 KAT6BQ8WYB5 2073 aa6.78□□□□□ -1.32
GABRB3-218ENST00000635994 SETBP1Q9Y6X0 1596 aa6.78□□□□□ -1.32
GABRB3-218ENST00000635994 USP17L5A8MUK1 530 aa6.78□□□□□ -1.32
GABRB3-218ENST00000635994 OPHN1O60890 802 aa6.78□□□□□ -1.32
GABRB3-218ENST00000635994 SLC4A1P02730 911 aa6.78□□□□□ -1.32
GABRB3-218ENST00000635994 FKBP3Q00688 224 aaKnown RBP6.78□□□□□ -1.32
GABRB3-218ENST00000635994 ART3Q13508 389 aa6.78□□□□□ -1.32
GABRB3-218ENST00000635994 MTERF2Q49AM1 385 aa6.78□□□□□ -1.32
GABRB3-218ENST00000635994 PGBD3Q8N328 593 aa6.78□□□□□ -1.32
GABRB3-218ENST00000635994 SLC26A7Q8TE54 656 aa6.78□□□□□ -1.32
GABRB3-218ENST00000635994 ARL8AQ96BM9 186 aa6.78□□□□□ -1.32
GABRB3-218ENST00000635994 XAB2Q9HCS7 855 aaKnown RBP6.78□□□□□ -1.32
GABRB3-218ENST00000635994 ATG3Q9NT62 314 aa6.78□□□□□ -1.32
GABRB3-218ENST00000635994 KIAA1024Q9UPX6 916 aa6.78□□□□□ -1.32
GABRB3-218ENST00000635994 DIS3Q9Y2L1 958 aaKnown RBP6.78□□□□□ -1.32
GABRB3-218ENST00000635994 DAAM1Q9Y4D1 1078 aa6.78□□□□□ -1.32
GABRB3-218ENST00000635994 CPSF1Q10570 1443 aaKnown RBP6.77□□□□□ -1.32
GABRB3-218ENST00000635994 ERBB3P21860 1342 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 CCDC78A2IDD5 438 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 CHL1O00533 1208 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 RPN1P04843 607 aaKnown RBP6.77□□□□□ -1.33
GABRB3-218ENST00000635994 OCRLQ01968 901 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 PDE1CQ14123 709 aaPredicted RBP6.77□□□□□ -1.33
GABRB3-218ENST00000635994 MXD4Q14582 209 aaPredicted RBP6.77□□□□□ -1.33
GABRB3-218ENST00000635994 ANGPTL8Q6UXH0 198 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 DCLK2Q8N568 766 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 NSUN6Q8TEA1 469 aaKnown RBP6.77□□□□□ -1.33
GABRB3-218ENST00000635994 GJA10Q969M2 543 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 SPATA16Q9BXB7 569 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 ZBTB40Q9NUA8 1239 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 ASNSD1Q9NWL6 643 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 NXF1Q9UBU9 619 aaKnown RBP6.77□□□□□ -1.33
GABRB3-218ENST00000635994 KCNJ14Q9UNX9 436 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 DEPDC5O75140 1603 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 ABCB11O95342 1321 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 TNPO2O14787 897 aaKnown RBP6.77□□□□□ -1.33
GABRB3-218ENST00000635994 KRT37O76014 449 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 PDE8BO95263 885 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 ANP32DO95626 131 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 APOA4P06727 396 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 NR2F2P24468 414 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 CAPZA2P47755 286 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 ARHGAP15Q53QZ3 475 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 SPATA1Q5VX52 437 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 TTC8Q8TAM2 541 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 FSD1LQ9BXM9 530 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 ZFYVE28Q9HCC9 887 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 COPRSQ9NQ92 184 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 CYP26B1Q9NR63 512 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 DDX56Q9NY93 547 aaKnown RBP6.77□□□□□ -1.33
GABRB3-218ENST00000635994 SERTAD1Q9UHV2 236 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 A0A1B0GW55 424 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 KIAA0391O15091 583 aaKnown RBP6.77□□□□□ -1.33
GABRB3-218ENST00000635994 NPM3O75607 178 aaKnown RBP6.77□□□□□ -1.33
GABRB3-218ENST00000635994 BAG2O95816 211 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 CALB1P05937 261 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 DUX4L2P0CJ85 424 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 DUX4L3P0CJ86 424 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 DUX4L4P0CJ87 422 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 DUX4L5P0CJ88 424 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 DUX4L6P0CJ89 424 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 DUX4L7P0CJ90 424 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 FCER1AP12319 257 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 CMA1P23946 247 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 CRKLP46109 303 aaKnown RBP6.77□□□□□ -1.33
GABRB3-218ENST00000635994 GYG1P46976 350 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 SREBF2Q12772 1141 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 NR1H3Q13133 447 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 SLC12A1Q13621 1099 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 MTFR1Q15390 333 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 C20orf194Q5TEA3 1177 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 PPP4R4Q6NUP7 873 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 CLEC4GQ6UXB4 293 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 SCN4BQ8IWT1 228 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 TMEM35BQ8NCS4 154 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 RBM41Q96IZ5 413 aaKnown RBP6.77□□□□□ -1.33
GABRB3-218ENST00000635994 PBKQ96KB5 322 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 FAM49AQ9H0Q0 323 aaPredicted RBP6.77□□□□□ -1.33
GABRB3-218ENST00000635994 COG4Q9H9E3 785 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 DUX4Q9UBX2 424 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 PALD1Q9ULE6 856 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 TRPM1Q7Z4N2 1603 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 ADAMTSL3P82987 1691 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 GOLGA8SH3BPF8 625 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 PSMD3O43242 534 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 ZFXP17010 805 aaPredicted RBP6.77□□□□□ -1.33
GABRB3-218ENST00000635994 MX2P20592 715 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 IL13P35225 146 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 ORC2Q13416 577 aaPredicted RBP6.77□□□□□ -1.33
GABRB3-218ENST00000635994 GRAPQ13588 217 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 SGO2Q562F6 1265 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 RWDD4Q6NW29 188 aaKnown RBP6.77□□□□□ -1.33
GABRB3-218ENST00000635994 GRAPLQ8TC17 118 aaPredicted RBP6.77□□□□□ -1.33
GABRB3-218ENST00000635994 UCMAQ8WVF2 138 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 PHKBQ93100 1093 aa6.77□□□□□ -1.33
GABRB3-218ENST00000635994 MAGOHBQ96A72 148 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms