RNA–Protein interactions for RNA: ENST00000635849.1

ARID1B-210, Transcript of AT-rich interaction domain 1B, human

APPRIS ALT2 TSL 5 BASIC

Gene ARID1B, Length 5,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARID1B-210	ENST00000635849	HOOK2	Q96ED9	719 aa		11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	PAGE5	Q96GU1	130 aa		11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	ANKRD36BP1	Q96IX9	119 aa		11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	ZBTB18	Q99592	522 aa		11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	LBHD1	Q9BQE6	289 aa	Predicted RBP	11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	GTSE1	Q9NYZ3	720 aa		11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	EHD2	Q9NZN4	543 aa		11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	PAIP2B	Q9ULR5	123 aa	Known RBP	11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	CFAP65	Q6ZU64	1925 aa	Known RBP	11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	SEC24D	O94855	1032 aa	Predicted RBP	11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	BRAF	P15056	766 aa		11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	TAF1B	Q53T94	588 aa	Predicted RBP	11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	FBXW10	Q5XX13	1052 aa		11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	PPP4R4	Q6NUP7	873 aa		11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	KRT26	Q7Z3Y9	468 aa		11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	STAMBPL1	Q96FJ0	436 aa		11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	ASCC2	Q9H1I8	757 aa	Predicted RBP	11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	GGT7	Q9UJ14	662 aa		11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	KDM5A	P29375	1690 aa	Known RBP	11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	BAG6	P46379	1132 aa		11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	PMS2	P54278	862 aa		11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	TFAM	Q00059	246 aa	Known RBP	11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	TEDDM1	Q5T9Z0	273 aa		11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	LARGE2	Q8N3Y3	721 aa		11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	THAP11	Q96EK4	314 aa		11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	NAF1	Q96HR8	494 aa	Known RBP	11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	ANTXR1	Q9H6X2	564 aa		11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	HSPH1	Q92598	858 aa		11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	VPS11	Q9H270	941 aa		11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	NRBP2	Q9NSY0	501 aa		11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	CCPG1	Q9ULG6	757 aa		11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	FAM135B	Q49AJ0	1406 aa		11.17	□□□□□ -0.62
ARID1B-210	ENST00000635849	KDM5C	P41229	1560 aa		11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	CFAP73	A6NFT4	308 aa		11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	TAC1	P20366	129 aa		11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	ARL4C	P56559	192 aa		11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	GUCY1A3	Q02108	690 aa		11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	CUL4A	Q13619	759 aa		11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	LRRC24	Q50LG9	513 aa		11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	TBC1D22A	Q8WUA7	517 aa		11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	IL17RA	Q96F46	866 aa		11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	RNF26	Q9BY78	433 aa	Predicted RBP	11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	CXorf56	Q9H5V9	222 aa		11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	QTRT2	Q9H974	415 aa	Known RBP	11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	COG4	Q9H9E3	785 aa		11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	KMT5A	Q9NQR1	393 aa		11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	NOC2L	Q9Y3T9	749 aa	Known RBP	11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	ZCCHC11	Q5TAX3	1644 aa	Known RBP	11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	TRIM66	O15016	1216 aa		11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	LPXN	O60711	386 aa		11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	MXI1	P50539	228 aa		11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	UBE3A	Q05086	875 aa		11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	SLFN13	Q68D06	897 aa		11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	VPS39	Q96JC1	886 aa		11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	STAP2	Q9UGK3	403 aa		11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	MORC2	Q9Y6X9	1032 aa	Predicted RBP	11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	PTPRE	P23469	700 aa		11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	DLGAP5	Q15398	846 aa		11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	CDO1	Q16878	200 aa		11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	TRIM60	Q495X7	471 aa		11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	RABGAP1L	Q5R372	815 aa		11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	DNAJC10	Q8IXB1	793 aa		11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	TBCK	Q8TEA7	893 aa		11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	OSBPL3	Q9H4L5	887 aa		11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	PCDHB6	Q9Y5E3	794 aa		11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	ERVK-7	P63135	1459 aa		11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	USP27X	A6NNY8	438 aa		11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	KRT38	O76015	456 aa		11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	CARS	P49589	748 aa	Known RBP	11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	SLC30A9	Q6PML9	568 aa		11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	FAM193B	Q96PV7	902 aa	Predicted RBP	11.16	□□□□□ -0.62
ARID1B-210	ENST00000635849	DDIT3	P35638	169 aa		11.15	□□□□□ -0.62
ARID1B-210	ENST00000635849	ICA1	Q05084	483 aa		11.15	□□□□□ -0.62
ARID1B-210	ENST00000635849	CERKL	Q49MI3	558 aa	Predicted RBP	11.15	□□□□□ -0.62
ARID1B-210	ENST00000635849	SRL	Q86TD4	932 aa		11.15	□□□□□ -0.62
ARID1B-210	ENST00000635849	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.15	□□□□□ -0.62
ARID1B-210	ENST00000635849	CCNYL1	Q8N7R7	359 aa		11.15	□□□□□ -0.62
ARID1B-210	ENST00000635849	DTX3L	Q8TDB6	740 aa		11.15	□□□□□ -0.62
ARID1B-210	ENST00000635849	ATP6V1G3	Q96LB4	118 aa		11.15	□□□□□ -0.62
ARID1B-210	ENST00000635849	TTC7A	Q9ULT0	858 aa	Predicted RBP	11.15	□□□□□ -0.62
ARID1B-210	ENST00000635849	ADGB	Q8N7X0	1667 aa		11.15	□□□□□ -0.62
ARID1B-210	ENST00000635849	LARGE1	O95461	756 aa		11.15	□□□□□ -0.62
ARID1B-210	ENST00000635849	MMP1	P03956	469 aa		11.15	□□□□□ -0.62
ARID1B-210	ENST00000635849	RASSF3	Q86WH2	238 aa		11.15	□□□□□ -0.62
ARID1B-210	ENST00000635849	ZNF577	Q9BSK1	485 aa		11.15	□□□□□ -0.62
ARID1B-210	ENST00000635849	ATG3	Q9NT62	314 aa		11.15	□□□□□ -0.62
ARID1B-210	ENST00000635849	CPSF3	Q9UKF6	684 aa	Known RBP	11.15	□□□□□ -0.62
ARID1B-210	ENST00000635849	TSC22D4	Q9Y3Q8	395 aa		11.15	□□□□□ -0.62
ARID1B-210	ENST00000635849	INO80B-WBP1	J3KQ70	363 aa		11.15	□□□□□ -0.62
ARID1B-210	ENST00000635849	NCK2	O43639	380 aa		11.15	□□□□□ -0.62
ARID1B-210	ENST00000635849	ZNF18	P17022	549 aa		11.15	□□□□□ -0.62
ARID1B-210	ENST00000635849	PLCG1	P19174	1290 aa		11.15	□□□□□ -0.62
ARID1B-210	ENST00000635849	RFX1	P22670	979 aa		11.15	□□□□□ -0.62
ARID1B-210	ENST00000635849	CTSW	P56202	376 aa		11.15	□□□□□ -0.62
ARID1B-210	ENST00000635849	NSUN2	Q08J23	767 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
ARID1B-210	ENST00000635849	KCNA1	Q09470	495 aa		11.15	□□□□□ -0.62
ARID1B-210	ENST00000635849	PSMD2	Q13200	908 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms