RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 GINM1Q9NU53 330 aa12.52□□□□□ -0.41
COL11A1-211ENST00000635193 GJA3Q9Y6H8 435 aa12.52□□□□□ -0.41
COL11A1-211ENST00000635193 KDM1AO60341 852 aa12.52□□□□□ -0.41
COL11A1-211ENST00000635193 KIF22Q14807 665 aa12.52□□□□□ -0.41
COL11A1-211ENST00000635193 LARGE2Q8N3Y3 721 aa12.52□□□□□ -0.41
COL11A1-211ENST00000635193 TGS1Q96RS0 853 aaKnown RBP12.52□□□□□ -0.41
COL11A1-211ENST00000635193 IRX2Q9BZI1 471 aaPredicted RBP12.52□□□□□ -0.41
COL11A1-211ENST00000635193 SAYSD1Q9NPB0 183 aa12.52□□□□□ -0.41
COL11A1-211ENST00000635193 METP08581 1390 aa12.52□□□□□ -0.41
COL11A1-211ENST00000635193 KIF28PB7ZC32 967 aa12.51□□□□□ -0.41
COL11A1-211ENST00000635193 USP17L8P0C7I0 530 aa12.51□□□□□ -0.41
COL11A1-211ENST00000635193 DDIT3P35638 169 aa12.51□□□□□ -0.41
COL11A1-211ENST00000635193 BRDTQ58F21 947 aaPredicted RBP12.51□□□□□ -0.41
COL11A1-211ENST00000635193 EPM2AIP1Q7L775 607 aaPredicted RBP12.51□□□□□ -0.41
COL11A1-211ENST00000635193 PDIK1LQ8N165 341 aa12.51□□□□□ -0.41
COL11A1-211ENST00000635193 DYNLL2Q96FJ2 89 aa12.51□□□□□ -0.41
COL11A1-211ENST00000635193 CCT8L2Q96SF2 557 aa12.51□□□□□ -0.41
COL11A1-211ENST00000635193 DDX47Q9H0S4 455 aaKnown RBP12.51□□□□□ -0.41
COL11A1-211ENST00000635193 SMYD3Q9H7B4 428 aa12.51□□□□□ -0.41
COL11A1-211ENST00000635193 SCHIP1Q9P0W5 487 aaPredicted RBP12.51□□□□□ -0.41
COL11A1-211ENST00000635193 CCPG1Q9ULG6 757 aa12.51□□□□□ -0.41
COL11A1-211ENST00000635193 CAPN11Q9UMQ6 739 aa12.51□□□□□ -0.41
COL11A1-211ENST00000635193 G3BP2Q9UN86 482 aaKnown RBP12.51□□□□□ -0.41
COL11A1-211ENST00000635193 NR1H3Q13133 447 aa12.51□□□□□ -0.41
COL11A1-211ENST00000635193 TMEM259Q4ZIN3 620 aa12.51□□□□□ -0.41
COL11A1-211ENST00000635193 ICA1LQ8NDH6 482 aa12.51□□□□□ -0.41
COL11A1-211ENST00000635193 SPATA4Q8NEY3 305 aa12.51□□□□□ -0.41
COL11A1-211ENST00000635193 CFAP36Q96G28 342 aa12.51□□□□□ -0.41
COL11A1-211ENST00000635193 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.51□□□□□ -0.41
COL11A1-211ENST00000635193 DNAJC12Q9UKB3 198 aa12.51□□□□□ -0.41
COL11A1-211ENST00000635193 EPHA10Q5JZY3 1008 aa12.51□□□□□ -0.41
COL11A1-211ENST00000635193 RUBCNQ92622 972 aa12.51□□□□□ -0.41
COL11A1-211ENST00000635193 A0A1W2PQC6 194 aa12.51□□□□□ -0.41
COL11A1-211ENST00000635193 LTKP29376 864 aa12.51□□□□□ -0.41
COL11A1-211ENST00000635193 CDC27P30260 824 aa12.51□□□□□ -0.41
COL11A1-211ENST00000635193 ALDH1B1P30837 517 aa12.51□□□□□ -0.41
COL11A1-211ENST00000635193 ITKQ08881 620 aa12.51□□□□□ -0.41
COL11A1-211ENST00000635193 FAM83BQ5T0W9 1011 aa12.51□□□□□ -0.41
COL11A1-211ENST00000635193 WDR75Q8IWA0 830 aaKnown RBP12.51□□□□□ -0.41
COL11A1-211ENST00000635193 SRRM1Q8IYB3 904 aaKnown RBP12.51□□□□□ -0.41
COL11A1-211ENST00000635193 DCLK2Q8N568 766 aa12.51□□□□□ -0.41
COL11A1-211ENST00000635193 KCTD6Q8NC69 237 aa12.51□□□□□ -0.41
COL11A1-211ENST00000635193 SUPT20HQ8NEM7 779 aa12.51□□□□□ -0.41
COL11A1-211ENST00000635193 HOOK2Q96ED9 719 aa12.51□□□□□ -0.41
COL11A1-211ENST00000635193 KIFC3Q9BVG8 833 aa12.51□□□□□ -0.41
COL11A1-211ENST00000635193 CALN1Q9BXU9 219 aa12.51□□□□□ -0.41
COL11A1-211ENST00000635193 NACA2Q9H009 215 aa12.51□□□□□ -0.41
COL11A1-211ENST00000635193 MLXIPLQ9NP71 852 aa12.51□□□□□ -0.41
COL11A1-211ENST00000635193 CLEC11AQ9Y240 323 aa12.51□□□□□ -0.41
COL11A1-211ENST00000635193 SYNJ2BP-COX16A0A087WUM0 186 aa12.5□□□□□ -0.41
COL11A1-211ENST00000635193 USP17L3A6NCW0 530 aa12.5□□□□□ -0.41
COL11A1-211ENST00000635193 USP17L4A6NCW7 530 aa12.5□□□□□ -0.41
COL11A1-211ENST00000635193 H0YIN7 160 aa12.5□□□□□ -0.41
COL11A1-211ENST00000635193 H7C1W4 665 aa12.5□□□□□ -0.41
COL11A1-211ENST00000635193 TTI1O43156 1089 aa12.5□□□□□ -0.41
COL11A1-211ENST00000635193 STAT2P52630 851 aa12.5□□□□□ -0.41
COL11A1-211ENST00000635193 TMPRSS15P98073 1019 aa12.5□□□□□ -0.41
COL11A1-211ENST00000635193 PRPSAP1Q14558 356 aa12.5□□□□□ -0.41
COL11A1-211ENST00000635193 USP17L1Q7RTZ2 530 aa12.5□□□□□ -0.41
COL11A1-211ENST00000635193 TTC17Q96AE7 1141 aa12.5□□□□□ -0.41
COL11A1-211ENST00000635193 POLR3CQ9BUI4 534 aaPredicted RBP12.5□□□□□ -0.41
COL11A1-211ENST00000635193 LY9Q9HBG7 655 aa12.5□□□□□ -0.41
COL11A1-211ENST00000635193 COX16Q9P0S2 106 aa12.5□□□□□ -0.41
COL11A1-211ENST00000635193 TRAF3IP3Q9Y228 551 aa12.5□□□□□ -0.41
COL11A1-211ENST00000635193 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.5□□□□□ -0.41
COL11A1-211ENST00000635193 UBN2Q6ZU65 1347 aa12.5□□□□□ -0.41
COL11A1-211ENST00000635193 PYGBP11216 843 aa12.5□□□□□ -0.41
COL11A1-211ENST00000635193 METTL16Q86W50 562 aaKnown RBP12.5□□□□□ -0.41
COL11A1-211ENST00000635193 ADPGKQ9BRR6 497 aa12.5□□□□□ -0.41
COL11A1-211ENST00000635193 SEPT9Q9UHD8 586 aaPredicted RBP12.5□□□□□ -0.41
COL11A1-211ENST00000635193 PSMC1P62191 440 aaKnown RBP12.5□□□□□ -0.41
COL11A1-211ENST00000635193 PLCB4Q15147 1175 aa12.5□□□□□ -0.41
COL11A1-211ENST00000635193 PFKFB3Q16875 520 aaPredicted RBP12.5□□□□□ -0.41
COL11A1-211ENST00000635193 TSGA10IPQ3SY00 556 aa12.5□□□□□ -0.41
COL11A1-211ENST00000635193 TMEM154Q6P9G4 183 aa12.5□□□□□ -0.41
COL11A1-211ENST00000635193 NLRP10Q86W26 655 aa12.5□□□□□ -0.41
COL11A1-211ENST00000635193 KIAA2013Q8IYS2 634 aa12.5□□□□□ -0.41
COL11A1-211ENST00000635193 LRRC1Q9BTT6 524 aa12.5□□□□□ -0.41
COL11A1-211ENST00000635193 ARHGEF9O43307 516 aa12.5□□□□□ -0.41
COL11A1-211ENST00000635193 IL6STP40189 918 aaPredicted RBP12.5□□□□□ -0.41
COL11A1-211ENST00000635193 PCGF5Q86SE9 256 aa12.5□□□□□ -0.41
COL11A1-211ENST00000635193 KIAA0825Q8IV33 1275 aa12.5□□□□□ -0.41
COL11A1-211ENST00000635193 MCUQ8NE86 351 aa12.5□□□□□ -0.41
COL11A1-211ENST00000635193 ATP6V0A1Q93050 837 aa12.5□□□□□ -0.41
COL11A1-211ENST00000635193 FBXL5Q9UKA1 691 aa12.5□□□□□ -0.41
COL11A1-211ENST00000635193 IVNS1ABPQ9Y6Y0 642 aa12.5□□□□□ -0.41
COL11A1-211ENST00000635193 SAMD9LQ8IVG5 1584 aa12.5□□□□□ -0.41
COL11A1-211ENST00000635193 PVALEFA0A1B0GWK0 134 aa12.49□□□□□ -0.41
COL11A1-211ENST00000635193 CCND1P24385 295 aa12.49□□□□□ -0.41
COL11A1-211ENST00000635193 PSMD7P51665 324 aa12.49□□□□□ -0.41
COL11A1-211ENST00000635193 GRAMD1AQ96CP6 724 aa12.49□□□□□ -0.41
COL11A1-211ENST00000635193 NRBP2Q9NSY0 501 aa12.49□□□□□ -0.41
COL11A1-211ENST00000635193 ASAP1Q9ULH1 1129 aa12.49□□□□□ -0.41
COL11A1-211ENST00000635193 ZBTB1Q9Y2K1 713 aa12.49□□□□□ -0.41
COL11A1-211ENST00000635193 MED14O60244 1454 aa12.49□□□□□ -0.41
COL11A1-211ENST00000635193 HSPA8P11142 646 aaKnown RBP12.49□□□□□ -0.41
COL11A1-211ENST00000635193 BRAFP15056 766 aa12.49□□□□□ -0.41
COL11A1-211ENST00000635193 CRYMQ14894 314 aa12.49□□□□□ -0.41
COL11A1-211ENST00000635193 DGKHQ86XP1 1220 aa12.49□□□□□ -0.41
COL11A1-211ENST00000635193 TRIM15Q9C019 465 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms