RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	CYP2C9	P11712	490 aa		29.07	■■■□□ 2.24
UBE3A-222	ENST00000630907	PTK7	Q13308	1070 aa		29.07	■■■□□ 2.24
UBE3A-222	ENST00000630907	HYI	Q5T013	277 aa		29.07	■■■□□ 2.24
UBE3A-222	ENST00000630907	MTHFD1L	Q6UB35	978 aa		29.07	■■■□□ 2.24
UBE3A-222	ENST00000630907	PIGO	Q8TEQ8	1089 aa		29.07	■■■□□ 2.24
UBE3A-222	ENST00000630907	CDK5RAP3	Q96JB5	506 aa		29.07	■■■□□ 2.24
UBE3A-222	ENST00000630907	CEP170P1	Q96L14	293 aa		29.07	■■■□□ 2.24
UBE3A-222	ENST00000630907	CCSER1	Q9C0I3	900 aa		29.07	■■■□□ 2.24
UBE3A-222	ENST00000630907	PRDM5	Q9NQX1	630 aa	Predicted RBP	29.07	■■■□□ 2.24
UBE3A-222	ENST00000630907	PDLIM7	Q9NR12	457 aa		29.07	■■■□□ 2.24
UBE3A-222	ENST00000630907	CYP26B1	Q9NR63	512 aa		29.07	■■■□□ 2.24
UBE3A-222	ENST00000630907	DDX19A	Q9NUU7	478 aa	Known RBP	29.07	■■■□□ 2.24
UBE3A-222	ENST00000630907		A0A087WWV3	80 aa		29.06	■■■□□ 2.24
UBE3A-222	ENST00000630907	KLRC1	P26715	233 aa		29.06	■■■□□ 2.24
UBE3A-222	ENST00000630907	NPEPPS	P55786	919 aa		29.06	■■■□□ 2.24
UBE3A-222	ENST00000630907	XKR9	Q5GH70	373 aa		29.06	■■■□□ 2.24
UBE3A-222	ENST00000630907	USP49	Q70CQ1	688 aa		29.06	■■■□□ 2.24
UBE3A-222	ENST00000630907	SERINC5	Q86VE9	423 aa		29.06	■■■□□ 2.24
UBE3A-222	ENST00000630907	SYMPK	Q92797	1274 aa	Known RBP	29.06	■■■□□ 2.24
UBE3A-222	ENST00000630907	CALML4	Q96GE6	196 aa		29.06	■■■□□ 2.24
UBE3A-222	ENST00000630907	EPSTI1	Q96J88	318 aa		29.06	■■■□□ 2.24
UBE3A-222	ENST00000630907	PNMA5	Q96PV4	448 aa		29.06	■■■□□ 2.24
UBE3A-222	ENST00000630907	SH2D3A	Q9BRG2	576 aa		29.06	■■■□□ 2.24
UBE3A-222	ENST00000630907	NT5C3A	Q9H0P0	336 aa		29.06	■■■□□ 2.24
UBE3A-222	ENST00000630907	PPME1	Q9Y570	386 aa		29.06	■■■□□ 2.24
UBE3A-222	ENST00000630907	ALPK3	Q96L96	1907 aa		29.06	■■■□□ 2.24
UBE3A-222	ENST00000630907	MAGEB2	O15479	319 aa		29.05	■■■□□ 2.24
UBE3A-222	ENST00000630907	TXLNA	P40222	546 aa		29.05	■■■□□ 2.24
UBE3A-222	ENST00000630907	GRB10	Q13322	594 aa		29.05	■■■□□ 2.24
UBE3A-222	ENST00000630907	AXDND1	Q5T1B0	1012 aa	Predicted RBP	29.05	■■■□□ 2.24
UBE3A-222	ENST00000630907	KCTD17	Q8N5Z5	321 aa		29.05	■■■□□ 2.24
UBE3A-222	ENST00000630907	RASSF8	Q8NHQ8	419 aa		29.05	■■■□□ 2.24
UBE3A-222	ENST00000630907	ZBTB10	Q96DT7	871 aa		29.05	■■■□□ 2.24
UBE3A-222	ENST00000630907	CCDC43	Q96MW1	224 aa	Known RBP	29.05	■■■□□ 2.24
UBE3A-222	ENST00000630907	DBR1	Q9UK59	544 aa	Known RBP	29.05	■■■□□ 2.24
UBE3A-222	ENST00000630907	TBX21	Q9UL17	535 aa		29.05	■■■□□ 2.24
UBE3A-222	ENST00000630907	PCDHA2	Q9Y5H9	948 aa		29.05	■■■□□ 2.24
UBE3A-222	ENST00000630907	NR2E3	Q9Y5X4	410 aa		29.05	■■■□□ 2.24
UBE3A-222	ENST00000630907	KAT6A	Q92794	2004 aa		29.04	■■■□□ 2.24
UBE3A-222	ENST00000630907	C22orf31	O95567	290 aa		29.04	■■■□□ 2.24
UBE3A-222	ENST00000630907	TBC1D8B	Q0IIM8	1120 aa		29.04	■■■□□ 2.24
UBE3A-222	ENST00000630907	TAF2	Q6P1X5	1199 aa		29.04	■■■□□ 2.24
UBE3A-222	ENST00000630907	SH3RF1	Q7Z6J0	888 aa		29.04	■■■□□ 2.24
UBE3A-222	ENST00000630907	CEP89	Q96ST8	783 aa		29.04	■■■□□ 2.24
UBE3A-222	ENST00000630907	PLIN2	Q99541	437 aa		29.04	■■■□□ 2.24
UBE3A-222	ENST00000630907	GDPD2	Q9HCC8	539 aa		29.04	■■■□□ 2.24
UBE3A-222	ENST00000630907	PRKAG2	Q9UGJ0	569 aa		29.04	■■■□□ 2.24
UBE3A-222	ENST00000630907	DNM3	Q9UQ16	869 aa		29.04	■■■□□ 2.24
UBE3A-222	ENST00000630907	KIAA0355	O15063	1070 aa		29.03	■■■□□ 2.24
UBE3A-222	ENST00000630907	RARRES1	P49788	294 aa		29.03	■■■□□ 2.24
UBE3A-222	ENST00000630907	MLLT1	Q03111	559 aa	Predicted RBP	29.03	■■■□□ 2.24
UBE3A-222	ENST00000630907	TMEM119	Q4V9L6	283 aa		29.03	■■■□□ 2.24
UBE3A-222	ENST00000630907	RUFY4	Q6ZNE9	571 aa		29.03	■■■□□ 2.24
UBE3A-222	ENST00000630907	DHX38	Q92620	1227 aa	Known RBP	29.03	■■■□□ 2.24
UBE3A-222	ENST00000630907	CCDC39	Q9UFE4	941 aa		29.03	■■■□□ 2.24
UBE3A-222	ENST00000630907	TRIM43B	A6NCK2	446 aa		29.02	■■■□□ 2.24
UBE3A-222	ENST00000630907	KARS	Q15046	597 aa	Known RBP	29.02	■■■□□ 2.24
UBE3A-222	ENST00000630907	CCDC155	Q8N6L0	562 aa		29.02	■■■□□ 2.24
UBE3A-222	ENST00000630907	WNT8B	Q93098	351 aa		29.02	■■■□□ 2.24
UBE3A-222	ENST00000630907	TRIM43	Q96BQ3	446 aa	Predicted RBP	29.02	■■■□□ 2.24
UBE3A-222	ENST00000630907	TRIP12	Q14669	1992 aa	Predicted RBP	29.01	■■■□□ 2.23
UBE3A-222	ENST00000630907	SMIM35	A0A1B0GVV1	85 aa		29.01	■■■□□ 2.23
UBE3A-222	ENST00000630907		E9PMD0	336 aa		29.01	■■■□□ 2.23
UBE3A-222	ENST00000630907	RFC5	P40937	340 aa		29.01	■■■□□ 2.23
UBE3A-222	ENST00000630907	BFSP2	Q13515	415 aa		29.01	■■■□□ 2.23
UBE3A-222	ENST00000630907	SHC4	Q6S5L8	630 aa		29.01	■■■□□ 2.23
UBE3A-222	ENST00000630907	EXOC8	Q8IYI6	725 aa		29.01	■■■□□ 2.23
UBE3A-222	ENST00000630907	METTL13	Q8N6R0	699 aa		29.01	■■■□□ 2.23
UBE3A-222	ENST00000630907	RETREG2	Q8NC44	543 aa		29.01	■■■□□ 2.23
UBE3A-222	ENST00000630907	CAGE1	Q8TC20	777 aa		29.01	■■■□□ 2.23
UBE3A-222	ENST00000630907	JPH2	Q9BR39	696 aa	Predicted RBP	29.01	■■■□□ 2.23
UBE3A-222	ENST00000630907	NOC4L	Q9BVI4	516 aa	Known RBP	29.01	■■■□□ 2.23
UBE3A-222	ENST00000630907	HIPK3	Q9H422	1215 aa		29.01	■■■□□ 2.23
UBE3A-222	ENST00000630907	MAF	O75444	373 aa	Predicted RBP	29	■■■□□ 2.23
UBE3A-222	ENST00000630907	EYA4	O95677	639 aa		29	■■■□□ 2.23
UBE3A-222	ENST00000630907	PLCG1	P19174	1290 aa		29	■■■□□ 2.23
UBE3A-222	ENST00000630907	POLG	P54098	1239 aa	Predicted RBP	29	■■■□□ 2.23
UBE3A-222	ENST00000630907	TRIM71	Q2Q1W2	868 aa	Known RBP	29	■■■□□ 2.23
UBE3A-222	ENST00000630907	ADAL	Q6DHV7	355 aa		29	■■■□□ 2.23
UBE3A-222	ENST00000630907	EFCAB12	Q6NXP0	572 aa		29	■■■□□ 2.23
UBE3A-222	ENST00000630907	KCNK18	Q7Z418	384 aa		29	■■■□□ 2.23
UBE3A-222	ENST00000630907	SLC7A3	Q8WY07	619 aa		29	■■■□□ 2.23
UBE3A-222	ENST00000630907	PPP1R12C	Q9BZL4	782 aa		29	■■■□□ 2.23
UBE3A-222	ENST00000630907	FAM49A	Q9H0Q0	323 aa	Predicted RBP	29	■■■□□ 2.23
UBE3A-222	ENST00000630907	BHMT2	Q9H2M3	363 aa		29	■■■□□ 2.23
UBE3A-222	ENST00000630907	SUGCT	Q9HAC7	445 aa		29	■■■□□ 2.23
UBE3A-222	ENST00000630907	TCHH	Q07283	1943 aa		29	■■■□□ 2.23
UBE3A-222	ENST00000630907	ARHGEF35	A5YM69	484 aa		28.99	■■■□□ 2.23
UBE3A-222	ENST00000630907	RPLP2	P05387	115 aa	Known RBP	28.99	■■■□□ 2.23
UBE3A-222	ENST00000630907	TMOD1	P28289	359 aa		28.99	■■■□□ 2.23
UBE3A-222	ENST00000630907	THPO	P40225	353 aa		28.99	■■■□□ 2.23
UBE3A-222	ENST00000630907	RSPH3	Q86UC2	560 aa		28.99	■■■□□ 2.23
UBE3A-222	ENST00000630907	DNAJB3	Q8WWF6	145 aa		28.99	■■■□□ 2.23
UBE3A-222	ENST00000630907	DHX33	Q9H6R0	707 aa	Known RBP	28.99	■■■□□ 2.23
UBE3A-222	ENST00000630907	FAM13B	Q9NYF5	915 aa		28.99	■■■□□ 2.23
UBE3A-222	ENST00000630907	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	28.99	■■■□□ 2.23
UBE3A-222	ENST00000630907	IGKV6-21	A0A0C4DH24	114 aa		28.98	■■■□□ 2.23
UBE3A-222	ENST00000630907	DGAT1	O75907	488 aa		28.98	■■■□□ 2.23
UBE3A-222	ENST00000630907	RAG1	P15918	1043 aa		28.98	■■■□□ 2.23
UBE3A-222	ENST00000630907	RBL2	Q08999	1139 aa		28.98	■■■□□ 2.23

Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms