RNA–Protein interactions for RNA: ENST00000629151.2

PTPN7-219, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5 BASIC

Gene PTPN7, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-219ENST00000629151 ANO5Q75V66 913 aa12.87□□□□□ -0.35
PTPN7-219ENST00000629151 SYT2Q8N9I0 419 aaPredicted RBP12.87□□□□□ -0.35
PTPN7-219ENST00000629151 SLC7A3Q8WY07 619 aa12.87□□□□□ -0.35
PTPN7-219ENST00000629151 TOX2Q96NM4 488 aa12.87□□□□□ -0.35
PTPN7-219ENST00000629151 PNMA5Q96PV4 448 aa12.87□□□□□ -0.35
PTPN7-219ENST00000629151 CYP26B1Q9NR63 512 aa12.87□□□□□ -0.35
PTPN7-219ENST00000629151 SEPT9Q9UHD8 586 aaPredicted RBP12.87□□□□□ -0.35
PTPN7-219ENST00000629151 GTF2IRD1Q9UHL9 959 aa12.87□□□□□ -0.35
PTPN7-219ENST00000629151 HOOK1Q9UJC3 728 aaKnown RBP12.87□□□□□ -0.35
PTPN7-219ENST00000629151 CCDC85CA6NKD9 419 aa12.86□□□□□ -0.35
PTPN7-219ENST00000629151 TLR3O15455 904 aaKnown RBP12.86□□□□□ -0.35
PTPN7-219ENST00000629151 MYL1P05976 194 aa12.86□□□□□ -0.35
PTPN7-219ENST00000629151 PLA2G4BP0C869 781 aa12.86□□□□□ -0.35
PTPN7-219ENST00000629151 PFKFB1P16118 471 aa12.86□□□□□ -0.35
PTPN7-219ENST00000629151 HOXC8P31273 242 aa12.86□□□□□ -0.35
PTPN7-219ENST00000629151 RARRES1P49788 294 aa12.86□□□□□ -0.35
PTPN7-219ENST00000629151 DNM2P50570 870 aa12.86□□□□□ -0.35
PTPN7-219ENST00000629151 CDK7P50613 346 aa12.86□□□□□ -0.35
PTPN7-219ENST00000629151 FAM160A1Q05DH4 1040 aa12.86□□□□□ -0.35
PTPN7-219ENST00000629151 TBC1D8BQ0IIM8 1120 aa12.86□□□□□ -0.35
PTPN7-219ENST00000629151 SNX17Q15036 470 aa12.86□□□□□ -0.35
PTPN7-219ENST00000629151 SLC39A5Q6ZMH5 540 aa12.86□□□□□ -0.35
PTPN7-219ENST00000629151 SV2BQ7L1I2 683 aa12.86□□□□□ -0.35
PTPN7-219ENST00000629151 RSPH3Q86UC2 560 aa12.86□□□□□ -0.35
PTPN7-219ENST00000629151 ELOA2Q8IYF1 753 aaPredicted RBP12.86□□□□□ -0.35
PTPN7-219ENST00000629151 CEP57L1Q8IYX8 460 aa12.86□□□□□ -0.35
PTPN7-219ENST00000629151 MCPH1Q8NEM0 835 aa12.86□□□□□ -0.35
PTPN7-219ENST00000629151 LARP4BQ92615 738 aaKnown RBP12.86□□□□□ -0.35
PTPN7-219ENST00000629151 RAD54LQ92698 747 aa12.86□□□□□ -0.35
PTPN7-219ENST00000629151 PAWRQ96IZ0 340 aaKnown RBP12.86□□□□□ -0.35
PTPN7-219ENST00000629151 TIGD1Q96MW7 591 aa12.86□□□□□ -0.35
PTPN7-219ENST00000629151 TNMDQ9H2S6 317 aa12.86□□□□□ -0.35
PTPN7-219ENST00000629151 WRAP73Q9P2S5 460 aaPredicted RBP12.86□□□□□ -0.35
PTPN7-219ENST00000629151 HDAC6Q9UBN7 1215 aa12.86□□□□□ -0.35
PTPN7-219ENST00000629151 PCDHA2Q9Y5H9 948 aa12.86□□□□□ -0.35
PTPN7-219ENST00000629151 MCM3APO60318 1980 aa12.86□□□□□ -0.35
PTPN7-219ENST00000629151 A0A1B0GVL5 298 aa12.85□□□□□ -0.35
PTPN7-219ENST00000629151 MBLAC1A4D2B0 266 aaPredicted RBP12.85□□□□□ -0.35
PTPN7-219ENST00000629151 DCDC2CA8MYV0 355 aa12.85□□□□□ -0.35
PTPN7-219ENST00000629151 POLR2DO15514 142 aaKnown RBP12.85□□□□□ -0.35
PTPN7-219ENST00000629151 CAND2O75155 1236 aa12.85□□□□□ -0.35
PTPN7-219ENST00000629151 MAFO75444 373 aaPredicted RBP12.85□□□□□ -0.35
PTPN7-219ENST00000629151 SLFN14P0C7P3 912 aa12.85□□□□□ -0.35
PTPN7-219ENST00000629151 CYP11B2P19099 503 aa12.85□□□□□ -0.35
PTPN7-219ENST00000629151 EN2P19622 333 aaPredicted RBP12.85□□□□□ -0.35
PTPN7-219ENST00000629151 KLRC1P26715 233 aa12.85□□□□□ -0.35
PTPN7-219ENST00000629151 POLGP54098 1239 aaPredicted RBP12.85□□□□□ -0.35
PTPN7-219ENST00000629151 CHMP4BP1P59074 171 aa12.85□□□□□ -0.35
PTPN7-219ENST00000629151 PSMC6P62333 389 aa12.85□□□□□ -0.35
PTPN7-219ENST00000629151 ECM1Q16610 540 aa12.85□□□□□ -0.35
PTPN7-219ENST00000629151 MTERF2Q49AM1 385 aa12.85□□□□□ -0.35
PTPN7-219ENST00000629151 FAM47CQ5HY64 1035 aa12.85□□□□□ -0.35
PTPN7-219ENST00000629151 PADI6Q6TGC4 694 aa12.85□□□□□ -0.35
PTPN7-219ENST00000629151 FAM43BQ6ZT52 329 aaPredicted RBP12.85□□□□□ -0.35
PTPN7-219ENST00000629151 ANKRD33Q7Z3H0 272 aa12.85□□□□□ -0.35
PTPN7-219ENST00000629151 UBE2Q1Q7Z7E8 422 aa12.85□□□□□ -0.35
PTPN7-219ENST00000629151 NME8Q8N427 588 aa12.85□□□□□ -0.35
PTPN7-219ENST00000629151 PIGOQ8TEQ8 1089 aa12.85□□□□□ -0.35
PTPN7-219ENST00000629151 TCP11Q8WWU5 503 aa12.85□□□□□ -0.35
PTPN7-219ENST00000629151 BHMT2Q9H2M3 363 aa12.85□□□□□ -0.35
PTPN7-219ENST00000629151 SETD4Q9NVD3 440 aa12.85□□□□□ -0.35
PTPN7-219ENST00000629151 NOD1Q9Y239 953 aa12.85□□□□□ -0.35
PTPN7-219ENST00000629151 GRIN2DO15399 1336 aa12.85□□□□□ -0.35
PTPN7-219ENST00000629151 PCNTO95613 3336 aa12.84□□□□□ -0.35
PTPN7-219ENST00000629151 IGKV6-21A0A0C4DH24 114 aa12.84□□□□□ -0.35
PTPN7-219ENST00000629151 SMIM35A0A1B0GVV1 85 aa12.84□□□□□ -0.35
PTPN7-219ENST00000629151 E9PMD0 336 aa12.84□□□□□ -0.35
PTPN7-219ENST00000629151 ASAP2O43150 1006 aa12.84□□□□□ -0.35
PTPN7-219ENST00000629151 ZNF202O95125 648 aa12.84□□□□□ -0.35
PTPN7-219ENST00000629151 MBD3O95983 291 aa12.84□□□□□ -0.35
PTPN7-219ENST00000629151 GUCY2CP25092 1073 aa12.84□□□□□ -0.35
PTPN7-219ENST00000629151 MCM4P33991 863 aa12.84□□□□□ -0.35
PTPN7-219ENST00000629151 NDUFA8P51970 172 aa12.84□□□□□ -0.35
PTPN7-219ENST00000629151 ADAM17P78536 824 aa12.84□□□□□ -0.35
PTPN7-219ENST00000629151 PTK7Q13308 1070 aa12.84□□□□□ -0.35
PTPN7-219ENST00000629151 E2F4Q16254 413 aa12.84□□□□□ -0.35
PTPN7-219ENST00000629151 PTGISQ16647 500 aa12.84□□□□□ -0.35
PTPN7-219ENST00000629151 IER5Q5VY09 327 aa12.84□□□□□ -0.35
PTPN7-219ENST00000629151 MTHFD1LQ6UB35 978 aa12.84□□□□□ -0.35
PTPN7-219ENST00000629151 RPAINQ86UA6 219 aa12.84□□□□□ -0.35
PTPN7-219ENST00000629151 CCDC155Q8N6L0 562 aa12.84□□□□□ -0.35
PTPN7-219ENST00000629151 PDILTQ8N807 584 aa12.84□□□□□ -0.35
PTPN7-219ENST00000629151 LMBR1Q8WVP7 490 aa12.84□□□□□ -0.35
PTPN7-219ENST00000629151 DHX58Q96C10 678 aa12.84□□□□□ -0.35
PTPN7-219ENST00000629151 HTATIP2Q9BUP3 242 aa12.84□□□□□ -0.35
PTPN7-219ENST00000629151 PANK2Q9BZ23 570 aa12.84□□□□□ -0.35
PTPN7-219ENST00000629151 DHX33Q9H6R0 707 aaKnown RBP12.84□□□□□ -0.35
PTPN7-219ENST00000629151 C17orf75Q9HAS0 396 aa12.84□□□□□ -0.35
PTPN7-219ENST00000629151 ATP6V0A4Q9HBG4 840 aa12.84□□□□□ -0.35
PTPN7-219ENST00000629151 LMBRD1Q9NUN5 540 aa12.84□□□□□ -0.35
PTPN7-219ENST00000629151 BLOC1S4Q9NUP1 217 aa12.84□□□□□ -0.35
PTPN7-219ENST00000629151 KBTBD4Q9NVX7 518 aa12.84□□□□□ -0.35
PTPN7-219ENST00000629151 TUBE1Q9UJT0 475 aa12.84□□□□□ -0.35
PTPN7-219ENST00000629151 ZBTB42B2RXF5 422 aa12.83□□□□□ -0.36
PTPN7-219ENST00000629151 KINO60870 393 aaKnown RBP12.83□□□□□ -0.36
PTPN7-219ENST00000629151 SSBP05455 408 aaKnown RBP eCLIP12.83□□□□□ -0.36
PTPN7-219ENST00000629151 SCP2P22307 547 aa12.83□□□□□ -0.36
PTPN7-219ENST00000629151 SLC12A3P55017 1021 aa12.83□□□□□ -0.36
PTPN7-219ENST00000629151 NPEPPSP55786 919 aa12.83□□□□□ -0.36
PTPN7-219ENST00000629151 MXD4Q14582 209 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms