RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 SSU72P8A0A1W2PR75 194 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 LRRD1A4D1F6 860 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 GOLGA6CA6NDK9 693 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 GOLGA6BA6NDN3 693 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 CCDC69A6NI79 296 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 WTIPA6NIX2 430 aaPredicted RBP2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 KRTAP29-1A8MX34 341 aaPredicted RBP2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 CHURC1-FNTBB4DL54 471 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 GOLGA8KD6RF30 607 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 NDUFAB1O14561 156 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 LIN7AO14910 233 aaPredicted RBP2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 TPD52L2O43399 206 aaKnown RBP2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 MYO1BO43795 1136 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 AHCYL1O43865 530 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 SMIM24O75264 130 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 E2F6O75461 281 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 DNAJC8O75937 253 aaPredicted RBP2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 BRD1O95696 1058 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 GOLGA6DP0CG33 693 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 MYBL2P10244 700 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 FERP16591 822 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 PLCG1P19174 1290 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 VCAM1P19320 739 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 GPTP24298 496 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 GJA8P48165 433 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 CD151P48509 253 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 ZNF165P49910 485 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 NEK4P51957 841 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 PCBP3P57721 371 aaKnown RBP2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 PSMC1P62191 440 aaKnown RBP2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 ST5P78524 1137 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 MXRA7P84157 204 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 DGCR2P98153 550 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 APOBRQ0VD83 1088 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 ZBTB17Q13105 803 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 PPFIA1Q13136 1202 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 G3BP1Q13283 466 aaKnown RBP eCLIP2.31□□□□□ -2.048e-10■■■■□ 19.7
SPTAN1-216ENST00000629047 PRPF4BQ13523 1007 aaKnown RBP2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 CUL3Q13618 768 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 MYBPC2Q14324 1141 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 TARBP2Q15633 366 aaKnown RBP2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 STX1AQ16623 288 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 LONRF2Q1L5Z9 754 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 C9orf131Q5VYM1 1079 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 SPTY2D1Q68D10 685 aaPredicted RBP2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 CC2D1AQ6P1N0 951 aaPredicted RBP2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 CCDC73Q6ZRK6 1079 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 ZNF365Q70YC5 407 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 SPATA21Q7Z572 469 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 ARHGAP22Q7Z5H3 698 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 B3GNT8Q7Z7M8 397 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 MYLK4Q86YV6 388 aaPredicted RBP2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 CCDC83Q8IWF9 413 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 LRRC8AQ8IWT6 810 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 RPAP2Q8IXW5 612 aaPredicted RBP2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 TEX9Q8N6V9 391 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 PRPF38AQ8NAV1 312 aaKnown RBP2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 LINC00116Q8NCU8 138 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 CNNM3Q8NE01 707 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 CCDC148Q8NFR7 591 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 MAGEC3Q8TD91 643 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 MICAL1Q8TDZ2 1067 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 SNRNP27Q8WVK2 155 aaKnown RBP2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 HNRNPLLQ8WVV9 542 aaKnown RBP2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 JARID2Q92833 1246 aaPredicted RBP2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 TEKT1Q969V4 418 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 VOPP1Q96AW1 172 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 ZNF428Q96B54 188 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 ZBTB8AQ96BR9 441 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 ALKBH8Q96BT7 664 aaKnown RBP2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 BICD1Q96G01 975 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 SCLT1Q96NL6 688 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 ALS2CR12Q96Q35 445 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 SPAG5Q96R06 1193 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 ASPNQ9BXN1 380 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 MOV10L1Q9BXT6 1211 aaKnown RBP2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 RANBP17Q9H2T7 1088 aaKnown RBP2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 VCX3BQ9H321 246 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 UNC45AQ9H3U1 944 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 FAM204AQ9H8W3 233 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 VIPAS39Q9H9C1 493 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 L2HGDHQ9H9P8 463 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 VCX3AQ9NNX9 186 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 KCND1Q9NSA2 647 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 KLC4Q9NSK0 619 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 RRP7BPQ9NSQ0 103 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 AP5S1Q9NUS5 200 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 ANO10Q9NW15 660 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 TRMT1Q9NXH9 659 aaKnown RBP2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 TUBA8Q9NY65 449 aaPredicted RBP2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 GOLGA6AQ9NYA3 693 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 TNFRSF10DQ9UBN6 386 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 KLHL3Q9UH77 587 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 LCMT1Q9UIC8 334 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 PPM1HQ9ULR3 514 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 PAIP2BQ9ULR5 123 aaKnown RBP2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 MRFAP1Q9Y605 127 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 CAPN7Q9Y6W3 813 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 FAM169AQ9Y6X4 670 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 SOS1Q07889 1333 aaPredicted RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms