RNA–Protein interactions for RNA: ENST00000628606.1

CHRNA4-211, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 183 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-211ENST00000628606 UPF2Q9HAU5 1272 aaKnown RBP17.94■□□□□ 0.46
CHRNA4-211ENST00000628606 GJB4Q9NTQ9 266 aa17.94■□□□□ 0.46
CHRNA4-211ENST00000628606 IGSF9BQ9UPX0 1349 aa17.94■□□□□ 0.46
CHRNA4-211ENST00000628606 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.93■□□□□ 0.46
CHRNA4-211ENST00000628606 BAG4O95429 457 aaKnown RBP17.93■□□□□ 0.46
CHRNA4-211ENST00000628606 OATP04181 439 aa17.93■□□□□ 0.46
CHRNA4-211ENST00000628606 FDPSP14324 419 aaKnown RBP17.93■□□□□ 0.46
CHRNA4-211ENST00000628606 CD52P31358 61 aa17.93■□□□□ 0.46
CHRNA4-211ENST00000628606 PRKCEQ02156 737 aa17.93■□□□□ 0.46
CHRNA4-211ENST00000628606 PAK2Q13177 524 aa17.93■□□□□ 0.46
CHRNA4-211ENST00000628606 MKRN4PQ13434 485 aaPredicted RBP17.93■□□□□ 0.46
CHRNA4-211ENST00000628606 CCDC85BQ15834 202 aaPredicted RBP17.93■□□□□ 0.46
CHRNA4-211ENST00000628606 PPP4R3AQ6IN85 833 aa17.93■□□□□ 0.46
CHRNA4-211ENST00000628606 ETNPPLQ8TBG4 499 aa17.93■□□□□ 0.46
CHRNA4-211ENST00000628606 OXER1Q8TDS5 423 aa17.93■□□□□ 0.46
CHRNA4-211ENST00000628606 TSPYL2Q9H2G4 693 aaPredicted RBP17.93■□□□□ 0.46
CHRNA4-211ENST00000628606 KDM3AQ9Y4C1 1321 aa17.93■□□□□ 0.46
CHRNA4-211ENST00000628606 PRUNE2Q8WUY3 3088 aa17.92■□□□□ 0.46
CHRNA4-211ENST00000628606 LOXHD1Q8IVV2 1947 aa17.92■□□□□ 0.46
CHRNA4-211ENST00000628606 EYSQ5T1H1 3165 aa17.92■□□□□ 0.46
CHRNA4-211ENST00000628606 RFXAPO00287 272 aa17.92■□□□□ 0.46
CHRNA4-211ENST00000628606 FOSBP53539 338 aa17.92■□□□□ 0.46
CHRNA4-211ENST00000628606 SAFBQ15424 915 aaKnown RBP eCLIP17.92■□□□□ 0.46
CHRNA4-211ENST00000628606 KIAA0319LQ8IZA0 1049 aa17.92■□□□□ 0.46
CHRNA4-211ENST00000628606 MAP7D2Q96T17 732 aa17.92■□□□□ 0.46
CHRNA4-211ENST00000628606 MTUS1Q9ULD2 1270 aa17.92■□□□□ 0.46
CHRNA4-211ENST00000628606 SIP14410 1827 aa17.91■□□□□ 0.46
CHRNA4-211ENST00000628606 TRANK1O15050 2925 aa17.91■□□□□ 0.46
CHRNA4-211ENST00000628606 LINC01553A4QN01 128 aa17.91■□□□□ 0.46
CHRNA4-211ENST00000628606 ZBTB42B2RXF5 422 aa17.91■□□□□ 0.46
CHRNA4-211ENST00000628606 ENPP3O14638 875 aa17.91■□□□□ 0.46
CHRNA4-211ENST00000628606 TBX3O15119 743 aa17.91■□□□□ 0.46
CHRNA4-211ENST00000628606 SLC37A4O43826 429 aa17.91■□□□□ 0.46
CHRNA4-211ENST00000628606 JAK2O60674 1132 aa17.91■□□□□ 0.46
CHRNA4-211ENST00000628606 DKC1O60832 514 aaKnown RBP eCLIP17.91■□□□□ 0.46
CHRNA4-211ENST00000628606 ARHGEF15O94989 841 aa17.91■□□□□ 0.46
CHRNA4-211ENST00000628606 C22orf31O95567 290 aa17.91■□□□□ 0.46
CHRNA4-211ENST00000628606 ERVK-21P61565 698 aa17.91■□□□□ 0.46
CHRNA4-211ENST00000628606 HTRA4P83105 476 aaPredicted RBP17.91■□□□□ 0.46
CHRNA4-211ENST00000628606 TBC1D8BQ0IIM8 1120 aa17.91■□□□□ 0.46
CHRNA4-211ENST00000628606 NFX1Q12986 1120 aaKnown RBP17.91■□□□□ 0.46
CHRNA4-211ENST00000628606 NR5A1Q13285 461 aa17.91■□□□□ 0.46
CHRNA4-211ENST00000628606 EFCAB12Q6NXP0 572 aa17.91■□□□□ 0.46
CHRNA4-211ENST00000628606 FAM43BQ6ZT52 329 aaPredicted RBP17.91■□□□□ 0.46
CHRNA4-211ENST00000628606 CCDC83Q8IWF9 413 aa17.91■□□□□ 0.46
CHRNA4-211ENST00000628606 ZNF710Q8N1W2 664 aa17.91■□□□□ 0.46
CHRNA4-211ENST00000628606 AGO3Q9H9G7 860 aaKnown RBP17.91■□□□□ 0.46
CHRNA4-211ENST00000628606 SH2B1Q9NRF2 756 aaPredicted RBP17.91■□□□□ 0.46
CHRNA4-211ENST00000628606 PADI3Q9ULW8 664 aa17.91■□□□□ 0.46
CHRNA4-211ENST00000628606 AKT3Q9Y243 479 aa17.91■□□□□ 0.46
CHRNA4-211ENST00000628606 ZNF862O60290 1169 aa17.9■□□□□ 0.46
CHRNA4-211ENST00000628606 RPS6KA5O75582 802 aa17.9■□□□□ 0.46
CHRNA4-211ENST00000628606 MMP1P03956 469 aa17.9■□□□□ 0.46
CHRNA4-211ENST00000628606 XKR3Q5GH77 459 aa17.9■□□□□ 0.46
CHRNA4-211ENST00000628606 KRT40Q6A162 431 aa17.9■□□□□ 0.46
CHRNA4-211ENST00000628606 DIS3L2Q8IYB7 885 aaKnown RBP17.9■□□□□ 0.46
CHRNA4-211ENST00000628606 SLFN12Q8IYM2 578 aa17.9■□□□□ 0.46
CHRNA4-211ENST00000628606 SAMD11Q96NU1 681 aa17.9■□□□□ 0.46
CHRNA4-211ENST00000628606 LLPHQ9BRT6 129 aaKnown RBP17.9■□□□□ 0.46
CHRNA4-211ENST00000628606 SUGCTQ9HAC7 445 aa17.9■□□□□ 0.46
CHRNA4-211ENST00000628606 RNF216Q9NWF9 866 aaPredicted RBP17.9■□□□□ 0.46
CHRNA4-211ENST00000628606 SEPT9Q9UHD8 586 aaPredicted RBP17.9■□□□□ 0.46
CHRNA4-211ENST00000628606 UNC80Q8N2C7 3258 aa17.89■□□□□ 0.45
CHRNA4-211ENST00000628606 EPOPA6NHQ4 379 aa17.89■□□□□ 0.45
CHRNA4-211ENST00000628606 DDX11L8A8MPP1 907 aa17.89■□□□□ 0.45
CHRNA4-211ENST00000628606 RBAK-RBAKDNI3L0D1 243 aa17.89■□□□□ 0.45
CHRNA4-211ENST00000628606 DLL1O00548 723 aa17.89■□□□□ 0.45
CHRNA4-211ENST00000628606 GPR182O15218 404 aa17.89■□□□□ 0.45
CHRNA4-211ENST00000628606 VTNP04004 478 aa17.89■□□□□ 0.45
CHRNA4-211ENST00000628606 STAG3L1P0CL83 205 aa17.89■□□□□ 0.45
CHRNA4-211ENST00000628606 POU3F3P20264 500 aaPredicted RBP17.89■□□□□ 0.45
CHRNA4-211ENST00000628606 CLCN3P51790 818 aa17.89■□□□□ 0.45
CHRNA4-211ENST00000628606 CRYBB1P53674 252 aaPredicted RBP17.89■□□□□ 0.45
CHRNA4-211ENST00000628606 PSMC5P62195 406 aa17.89■□□□□ 0.45
CHRNA4-211ENST00000628606 HMGN5P82970 282 aaKnown RBP17.89■□□□□ 0.45
CHRNA4-211ENST00000628606 PPP2R5CQ13362 524 aa17.89■□□□□ 0.45
CHRNA4-211ENST00000628606 SKIV2LQ15477 1246 aaKnown RBP17.89■□□□□ 0.45
CHRNA4-211ENST00000628606 UGCGQ16739 394 aa17.89■□□□□ 0.45
CHRNA4-211ENST00000628606 KIZQ2M2Z5 673 aa17.89■□□□□ 0.45
CHRNA4-211ENST00000628606 FAM184AQ8NB25 1140 aa17.89■□□□□ 0.45
CHRNA4-211ENST00000628606 FBXO22Q8NEZ5 403 aa17.89■□□□□ 0.45
CHRNA4-211ENST00000628606 SCLT1Q96NL6 688 aa17.89■□□□□ 0.45
CHRNA4-211ENST00000628606 PPP1R16BQ96T49 567 aa17.89■□□□□ 0.45
CHRNA4-211ENST00000628606 KCNMB3Q9NPA1 279 aa17.89■□□□□ 0.45
CHRNA4-211ENST00000628606 LRFN2Q9ULH4 789 aa17.89■□□□□ 0.45
CHRNA4-211ENST00000628606 MTCH2Q9Y6C9 303 aa17.89■□□□□ 0.45
CHRNA4-211ENST00000628606 PRRC2BQ5JSZ5 2229 aaKnown RBP17.88■□□□□ 0.45
CHRNA4-211ENST00000628606 TTC3P53804 2025 aa17.88■□□□□ 0.45
CHRNA4-211ENST00000628606 DENND3A2RUS2 1198 aa17.88■□□□□ 0.45
CHRNA4-211ENST00000628606 BTBD18B2RXH4 712 aa17.88■□□□□ 0.45
CHRNA4-211ENST00000628606 DNM2P50570 870 aa17.88■□□□□ 0.45
CHRNA4-211ENST00000628606 GRB10Q13322 594 aa17.88■□□□□ 0.45
CHRNA4-211ENST00000628606 RABEP1Q15276 862 aa17.88■□□□□ 0.45
CHRNA4-211ENST00000628606 TMEM266Q2M3C6 531 aa17.88■□□□□ 0.45
CHRNA4-211ENST00000628606 MTERF2Q49AM1 385 aa17.88■□□□□ 0.45
CHRNA4-211ENST00000628606 B3GNT9Q6UX72 402 aa17.88■□□□□ 0.45
CHRNA4-211ENST00000628606 LRRC71Q8N4P6 559 aa17.88■□□□□ 0.45
CHRNA4-211ENST00000628606 FIBCD1Q8N539 461 aa17.88■□□□□ 0.45
CHRNA4-211ENST00000628606 BANK1Q8NDB2 785 aa17.88■□□□□ 0.45
CHRNA4-211ENST00000628606 SP7Q8TDD2 431 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms