RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 PADI6Q6TGC4 694 aa8.36□□□□□ -1.07
PTP4A1-206ENST00000627002 METTL7BQ6UX53 244 aa8.36□□□□□ -1.07
PTP4A1-206ENST00000627002 STXBP4Q6ZWJ1 553 aa8.36□□□□□ -1.07
PTP4A1-206ENST00000627002 TRMT44Q8IYL2 757 aaKnown RBP8.36□□□□□ -1.07
PTP4A1-206ENST00000627002 KIAA0895Q8NCT3 520 aa8.36□□□□□ -1.07
PTP4A1-206ENST00000627002 ANKRD20A12PQ8NF67 263 aa8.36□□□□□ -1.07
PTP4A1-206ENST00000627002 SEPT1Q8WYJ6 367 aa8.36□□□□□ -1.07
PTP4A1-206ENST00000627002 P2RX5Q93086 422 aa8.36□□□□□ -1.07
PTP4A1-206ENST00000627002 TRIM44Q96DX7 344 aaPredicted RBP8.36□□□□□ -1.07
PTP4A1-206ENST00000627002 TSG101Q99816 390 aa8.36□□□□□ -1.07
PTP4A1-206ENST00000627002 REEP2Q9BRK0 252 aa8.36□□□□□ -1.07
PTP4A1-206ENST00000627002 RUSC1Q9BVN2 902 aa8.36□□□□□ -1.07
PTP4A1-206ENST00000627002 ZHX3Q9H4I2 956 aa8.36□□□□□ -1.07
PTP4A1-206ENST00000627002 MLXIPQ9HAP2 919 aa8.36□□□□□ -1.07
PTP4A1-206ENST00000627002 OLFML3Q9NRN5 406 aa8.36□□□□□ -1.07
PTP4A1-206ENST00000627002 GABBR1Q9UBS5 961 aa8.36□□□□□ -1.07
PTP4A1-206ENST00000627002 DDX41Q9UJV9 622 aaKnown RBP8.36□□□□□ -1.07
PTP4A1-206ENST00000627002 PCDHA2Q9Y5H9 948 aa8.36□□□□□ -1.07
PTP4A1-206ENST00000627002 IGSF9BQ9UPX0 1349 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 IGKV6D-21A0A0A0MT36 114 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 RBM47A0AV96 593 aaKnown RBP8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 ZBTB39O15060 712 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 PTMAP06454 111 aaKnown RBP8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 HOXC6P09630 235 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 TXNP10599 105 aaKnown RBP8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 ZNF131P52739 623 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 SP4Q02446 784 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 LRRC63Q05C16 580 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 RAD51AP2Q09MP3 1159 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 MAP2K5Q13163 448 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 UGCGQ16739 394 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 LY6KQ17RY6 165 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 HS1BP3Q53T59 392 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 XKR3Q5GH77 459 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 CDKAL1Q5VV42 579 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 CENPPQ6IPU0 288 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 TTI2Q6NXR4 508 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 CCDC62Q6P9F0 684 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 EEPD1Q7L9B9 569 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 FAM114A1Q8IWE2 563 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 FBXO16Q8IX29 292 aaPredicted RBP8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 DHX37Q8IY37 1157 aaKnown RBP8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 MYOCDQ8IZQ8 938 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 MYCT1Q8N699 235 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 SLC17A8Q8NDX2 589 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 SOCS4Q8WXH5 440 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 MAML3Q96JK9 1138 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 TRIM47Q96LD4 638 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 DRC1Q96MC2 740 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 MED15Q96RN5 788 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 CTAGE1Q96RT6 745 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 HSD3B7Q9H2F3 369 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 THAP9Q9H5L6 903 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 AZI2Q9H6S1 392 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 PARVGQ9HBI0 331 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 ZNF302Q9NR11 478 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 MAPK8IP1Q9UQF2 711 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 PPME1Q9Y570 386 aa8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 MAFBQ9Y5Q3 323 aaPredicted RBP8.35□□□□□ -1.07
PTP4A1-206ENST00000627002 UBE4BO95155 1302 aa8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 NOP56O00567 594 aaKnown RBP8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 NKRFO15226 690 aaKnown RBP eCLIP8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 EIF3DO15371 548 aaKnown RBP eCLIP8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 ZNF862O60290 1169 aa8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 USO1O60763 962 aaKnown RBP8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 HIP1RO75146 1068 aa8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 ARIH2O95376 493 aa8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 GH1P01241 217 aa8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 MAPTP10636 758 aaKnown RBP8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 RGS2P41220 211 aa8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 UBASH3AP57075 661 aa8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 PRKCEQ02156 737 aa8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 CRHR2Q13324 411 aa8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 ALCAMQ13740 583 aa8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 LAMC2Q13753 1193 aa8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 XKR9Q5GH70 373 aa8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 OLFML2BQ68BL8 750 aa8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 TAPT1Q6NXT6 567 aa8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 ANO5Q75V66 913 aa8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 SFR1Q86XK3 245 aa8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 CCDC60Q8IWA6 550 aaPredicted RBP8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 DRC7Q8IY82 874 aa8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 CSGALNACT2Q8N6G5 542 aa8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 MCPH1Q8NEM0 835 aa8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 AFAP1L1Q8TED9 768 aa8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 HPS3Q969F9 1004 aa8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 FAM167AQ96KS9 214 aa8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 CEP170P1Q96L14 293 aa8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 SPATA33Q96N06 139 aa8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 GPR20Q99678 358 aa8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 TINF2Q9BSI4 451 aa8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 MCOLN1Q9GZU1 580 aa8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 ABHD16BQ9H3Z7 469 aa8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 BCAS3Q9H6U6 928 aa8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 MRPL44Q9H9J2 332 aaKnown RBP8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 SAMSN1Q9NSI8 373 aaKnown RBP8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 NRBP2Q9NSY0 501 aa8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 IFNKQ9P0W0 207 aa8.34□□□□□ -1.07
PTP4A1-206ENST00000627002 LARSQ9P2J5 1176 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms