RNA–Protein interactions for RNA: ENST00000626315.1

SCARNA15.3-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 122 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.3-201ENST00000626315 PPFIBP1Q86W92 1011 aa3.72□□□□□ -1.81
SCARNA15.3-201ENST00000626315 SPACA3Q8IXA5 215 aa3.72□□□□□ -1.81
SCARNA15.3-201ENST00000626315 DHX37Q8IY37 1157 aaKnown RBP3.72□□□□□ -1.81
SCARNA15.3-201ENST00000626315 MRPL43Q8N983 215 aaKnown RBP3.72□□□□□ -1.81
SCARNA15.3-201ENST00000626315 TTC9Q92623 222 aa3.72□□□□□ -1.81
SCARNA15.3-201ENST00000626315 FGF11Q92914 225 aa3.72□□□□□ -1.81
SCARNA15.3-201ENST00000626315 LGMNQ99538 433 aa3.72□□□□□ -1.81
SCARNA15.3-201ENST00000626315 ARHGAP9Q9BRR9 750 aa3.72□□□□□ -1.81
SCARNA15.3-201ENST00000626315 METTL22Q9BUU2 404 aaPredicted RBP3.72□□□□□ -1.81
SCARNA15.3-201ENST00000626315 KATNBL1Q9H079 304 aa3.72□□□□□ -1.81
SCARNA15.3-201ENST00000626315 RC3H2Q9HBD1 1191 aaKnown RBP3.72□□□□□ -1.81
SCARNA15.3-201ENST00000626315 LRFN2Q9ULH4 789 aa3.72□□□□□ -1.81
SCARNA15.3-201ENST00000626315 COL5A1P20908 1838 aaPredicted RBP3.72□□□□□ -1.81
SCARNA15.3-201ENST00000626315 JMJD1CQ15652 2540 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 FLNCQ14315 2725 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 C2orf71A6NGG8 1288 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 ANHXE9PGG2 379 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 ENPP3O14638 875 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 TLX3O43711 291 aaPredicted RBP3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 N4BP1O75113 896 aaKnown RBP3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 PAPSS2O95340 614 aaPredicted RBP3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 CXCL14O95715 111 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 HLA-DOAP06340 250 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 SFTPCP11686 197 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 GBP1P32455 592 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 PHKA1P46020 1223 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 OXCT1P55809 520 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 NEUROD1Q13562 356 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 HTR4Q13639 388 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 LRRC32Q14392 662 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 SHROOM1Q2M3G4 852 aaPredicted RBP3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 PROX2Q3B8N5 592 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 TRIM61Q5EBN2 209 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 C6orf118Q5T5N4 469 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 BEND3Q5T5X7 828 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 C1QL3Q5VWW1 255 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 ELMSAN1Q6PJG2 1045 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 XKR5Q6UX68 686 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 MTSS1LQ765P7 747 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 CYP2U1Q7Z449 544 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 FBXO16Q8IX29 292 aaPredicted RBP3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 SPATA5Q8NB90 893 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 ST13P5Q8NFI4 369 aaPredicted RBP3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 PHKBQ93100 1093 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 MARVELD3Q96A59 401 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 CTAGE1Q96RT6 745 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 MDFIQ99750 246 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 ALG1Q9BT22 464 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 GTPBP2Q9BX10 602 aaKnown RBP3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 PLA2G12BQ9BX93 195 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 TEX13BQ9BXU2 312 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 PCGF6Q9BYE7 350 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 WDR11Q9BZH6 1224 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 PIDD1Q9HB75 910 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 WDR6Q9NNW5 1121 aaKnown RBP3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 KIAA1522Q9P206 1035 aaPredicted RBP3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 HDAC6Q9UBN7 1215 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 FBXO40Q9UH90 709 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 GTF2IRD1Q9UHL9 959 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 ZFP37Q9Y6Q3 630 aaPredicted RBP3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 PTPRSQ13332 1948 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 MICAL3Q7RTP6 2002 aa3.71□□□□□ -1.82
SCARNA15.3-201ENST00000626315 CCDC163A0A0D9SF12 145 aa3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 PATE3B3GLJ2 98 aa3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 K7ESF4 209 aa3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 NKRFO15226 690 aaKnown RBP eCLIP3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 ATP9AO75110 1047 aa3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 LDHCP07864 332 aa3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 CTSHP09668 335 aa3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 IFIT1P09914 478 aaKnown RBP3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 EPCAMP16422 314 aa3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 CASTP20810 708 aaKnown RBP3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 IBSPP21815 317 aaPredicted RBP3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 COL8A1P27658 744 aa3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 ACTN2P35609 894 aa3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 USP5P45974 858 aa3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 INHBCP55103 352 aa3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 FOXK1P85037 733 aa3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 PLCB3Q01970 1234 aa3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 RNASELQ05823 741 aaKnown RBP3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 GIT2Q14161 759 aa3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 HIC1Q14526 733 aa3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 IGFBP7Q16270 282 aa3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 ABCB5Q2M3G0 1257 aa3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 TRIM71Q2Q1W2 868 aaKnown RBP3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 PPP1R26Q5T8A7 1209 aaPredicted RBP3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 FHL5Q5TD97 284 aa3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 TAPT1Q6NXT6 567 aa3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 TATDN1Q6P1N9 297 aa3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 CYP26C1Q6V0L0 522 aa3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 GET4Q7L5D6 327 aaPredicted RBP3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 CXXC5Q7LFL8 322 aaKnown RBP3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 ATCAYQ86WG3 371 aa3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 MARCH9Q86YJ5 346 aa3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 NPAS4Q8IUM7 802 aa3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 TEX11Q8IYF3 940 aa3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 SPRYD3Q8NCJ5 442 aa3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 SNIP1Q8TAD8 396 aaKnown RBP3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 SSC4DQ8WTU2 575 aa3.7□□□□□ -1.82
SCARNA15.3-201ENST00000626315 FAM3CQ92520 227 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms