RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 ALG1Q9BT22 464 aa5.02□□□□□ -1.61
VBP1-204ENST00000625964 JAM3Q9BX67 310 aa5.02□□□□□ -1.61
VBP1-204ENST00000625964 TLR9Q9NR96 1032 aa5.02□□□□□ -1.61
VBP1-204ENST00000625964 CEP72Q9P209 647 aa5.02□□□□□ -1.61
VBP1-204ENST00000625964 USP35Q9P2H5 1018 aa5.02□□□□□ -1.61
VBP1-204ENST00000625964 GIT1Q9Y2X7 761 aa5.02□□□□□ -1.61
VBP1-204ENST00000625964 NR2E1Q9Y466 385 aa5.02□□□□□ -1.61
VBP1-204ENST00000625964 PTCH2Q9Y6C5 1203 aa5.02□□□□□ -1.61
VBP1-204ENST00000625964 AQP7O14520 342 aa5.01□□□□□ -1.61
VBP1-204ENST00000625964 CYP27B1O15528 508 aa5.01□□□□□ -1.61
VBP1-204ENST00000625964 C6orf222P0C671 652 aaPredicted RBP5.01□□□□□ -1.61
VBP1-204ENST00000625964 PFKPQ01813 784 aa5.01□□□□□ -1.61
VBP1-204ENST00000625964 TOP3AQ13472 1001 aaPredicted RBP5.01□□□□□ -1.61
VBP1-204ENST00000625964 DPP8Q6V1X1 898 aaPredicted RBP5.01□□□□□ -1.61
VBP1-204ENST00000625964 Q6ZPA2 131 aa5.01□□□□□ -1.61
VBP1-204ENST00000625964 ADGRE4PQ86SQ3 457 aa5.01□□□□□ -1.61
VBP1-204ENST00000625964 TMPRSS6Q8IU80 811 aa5.01□□□□□ -1.61
VBP1-204ENST00000625964 THEMISQ8N1K5 641 aaPredicted RBP5.01□□□□□ -1.61
VBP1-204ENST00000625964 CLEC4DQ8WXI8 215 aa5.01□□□□□ -1.61
VBP1-204ENST00000625964 CDIP1Q9H305 208 aa5.01□□□□□ -1.61
VBP1-204ENST00000625964 C12orf65Q9H3J6 166 aaKnown RBP5.01□□□□□ -1.61
VBP1-204ENST00000625964 NELFAQ9H3P2 528 aa5.01□□□□□ -1.61
VBP1-204ENST00000625964 SLC2A4RGQ9NR83 387 aa5.01□□□□□ -1.61
VBP1-204ENST00000625964 KRTAP23-1A1A580 65 aa5□□□□□ -1.61
VBP1-204ENST00000625964 ZNF839A8K0R7 811 aa5□□□□□ -1.61
VBP1-204ENST00000625964 SLC27A2O14975 620 aa5□□□□□ -1.61
VBP1-204ENST00000625964 SOD2P04179 222 aa5□□□□□ -1.61
VBP1-204ENST00000625964 GABREP78334 506 aa5□□□□□ -1.61
VBP1-204ENST00000625964 MRPS21P82921 87 aaKnown RBP5□□□□□ -1.61
VBP1-204ENST00000625964 GRIN1Q05586 938 aa5□□□□□ -1.61
VBP1-204ENST00000625964 FOXL1Q12952 345 aa5□□□□□ -1.61
VBP1-204ENST00000625964 CD276Q5ZPR3 534 aa5□□□□□ -1.61
VBP1-204ENST00000625964 PIP4K2CQ8TBX8 421 aa5□□□□□ -1.61
VBP1-204ENST00000625964 PIF1Q9H611 641 aa5□□□□□ -1.61
VBP1-204ENST00000625964 NDOR1Q9UHB4 597 aa5□□□□□ -1.61
VBP1-204ENST00000625964 PUF60Q9UHX1 559 aaKnown RBP5□□□□□ -1.61
VBP1-204ENST00000625964 FAM47E-STBD1D6RA91 191 aa4.99□□□□□ -1.61
VBP1-204ENST00000625964 IL18BPO95998 194 aa4.99□□□□□ -1.61
VBP1-204ENST00000625964 GNAT1P11488 350 aa4.99□□□□□ -1.61
VBP1-204ENST00000625964 KRTAP10-11P60412 298 aa4.99□□□□□ -1.61
VBP1-204ENST00000625964 GUCY1A3Q02108 690 aa4.99□□□□□ -1.61
VBP1-204ENST00000625964 PAK1Q13153 545 aa4.99□□□□□ -1.61
VBP1-204ENST00000625964 LAIR1Q6GTX8 287 aa4.99□□□□□ -1.61
VBP1-204ENST00000625964 JMYQ8N9B5 988 aa4.99□□□□□ -1.61
VBP1-204ENST00000625964 IPPKQ9H8X2 491 aa4.99□□□□□ -1.61
VBP1-204ENST00000625964 PLA2G3Q9NZ20 509 aa4.99□□□□□ -1.61
VBP1-204ENST00000625964 SFMBT1Q9UHJ3 866 aa4.99□□□□□ -1.61
VBP1-204ENST00000625964 MATN2O00339 956 aa4.98□□□□□ -1.61
VBP1-204ENST00000625964 ARHGAP6O43182 974 aa4.98□□□□□ -1.61
VBP1-204ENST00000625964 RHOBTB3O94955 611 aa4.98□□□□□ -1.61
VBP1-204ENST00000625964 COL6A2P12110 1019 aa4.98□□□□□ -1.61
VBP1-204ENST00000625964 MSX2P35548 267 aaPredicted RBP4.98□□□□□ -1.61
VBP1-204ENST00000625964 SPIRE1Q08AE8 756 aa4.98□□□□□ -1.61
VBP1-204ENST00000625964 SH3TC2Q8TF17 1288 aa4.98□□□□□ -1.61
VBP1-204ENST00000625964 TACO1Q9BSH4 297 aaKnown RBP4.98□□□□□ -1.61
VBP1-204ENST00000625964 SLC52A2Q9HAB3 445 aa4.98□□□□□ -1.61
VBP1-204ENST00000625964 PCDHA8Q9Y5H6 950 aa4.98□□□□□ -1.61
VBP1-204ENST00000625964 CRTAMO95727 393 aa4.97□□□□□ -1.61
VBP1-204ENST00000625964 APPP05067 770 aa4.97□□□□□ -1.61
VBP1-204ENST00000625964 NAT1P18440 290 aa4.97□□□□□ -1.61
VBP1-204ENST00000625964 ETV4P43268 484 aa4.97□□□□□ -1.61
VBP1-204ENST00000625964 RANGAP1P46060 587 aaPredicted RBP4.97□□□□□ -1.61
VBP1-204ENST00000625964 TUSC3Q13454 348 aa4.97□□□□□ -1.61
VBP1-204ENST00000625964 OTOP3Q7RTS5 596 aa4.97□□□□□ -1.61
VBP1-204ENST00000625964 SGMS1Q86VZ5 419 aa4.97□□□□□ -1.61
VBP1-204ENST00000625964 PCDHA9Q9Y5H5 950 aa4.97□□□□□ -1.61
VBP1-204ENST00000625964 CCDC163A0A0D9SF12 145 aa4.97□□□□□ -1.61
VBP1-204ENST00000625964 KRTAP29-1A8MX34 341 aaPredicted RBP4.97□□□□□ -1.61
VBP1-204ENST00000625964 NKRFO15226 690 aaKnown RBP eCLIP4.97□□□□□ -1.61
VBP1-204ENST00000625964 EFCAB14O75071 495 aa4.97□□□□□ -1.61
VBP1-204ENST00000625964 SRGAP2CP0DJJ0 459 aa4.97□□□□□ -1.61
VBP1-204ENST00000625964 SQSTM1Q13501 440 aa4.97□□□□□ -1.61
VBP1-204ENST00000625964 ZC3H7AQ8IWR0 971 aaKnown RBP4.97□□□□□ -1.61
VBP1-204ENST00000625964 KANSL2Q9H9L4 492 aa4.97□□□□□ -1.61
VBP1-204ENST00000625964 ESYT3A0FGR9 886 aa4.96□□□□□ -1.62
VBP1-204ENST00000625964 PMS2P1A4D2B8 440 aa4.96□□□□□ -1.62
VBP1-204ENST00000625964 ARVCFO00192 962 aa4.96□□□□□ -1.62
VBP1-204ENST00000625964 RASGRP1O95267 797 aa4.96□□□□□ -1.62
VBP1-204ENST00000625964 ST5P78524 1137 aa4.96□□□□□ -1.62
VBP1-204ENST00000625964 PRIMA1Q86XR5 153 aa4.96□□□□□ -1.62
VBP1-204ENST00000625964 RBM12BQ8IXT5 1001 aaKnown RBP4.96□□□□□ -1.62
VBP1-204ENST00000625964 RPUSD2Q8IZ73 545 aaKnown RBP4.96□□□□□ -1.62
VBP1-204ENST00000625964 PCDH19Q8TAB3 1148 aa4.96□□□□□ -1.62
VBP1-204ENST00000625964 UHMK1Q8TAS1 419 aaKnown RBP4.96□□□□□ -1.62
VBP1-204ENST00000625964 SLC7A14Q8TBB6 771 aa4.96□□□□□ -1.62
VBP1-204ENST00000625964 FBXW5Q969U6 566 aa4.96□□□□□ -1.62
VBP1-204ENST00000625964 ZNF764Q96H86 408 aaPredicted RBP4.96□□□□□ -1.62
VBP1-204ENST00000625964 MRPL4Q9BYD3 311 aaKnown RBP4.96□□□□□ -1.62
VBP1-204ENST00000625964 NCOA5Q9HCD5 579 aaKnown RBP4.96□□□□□ -1.62
VBP1-204ENST00000625964 CATSPERZQ9NTU4 200 aa4.96□□□□□ -1.62
VBP1-204ENST00000625964 PTGFRNQ9P2B2 879 aa4.96□□□□□ -1.62
VBP1-204ENST00000625964 FBXO10Q9UK96 956 aa4.96□□□□□ -1.62
VBP1-204ENST00000625964 DSEQ9UL01 958 aa4.96□□□□□ -1.62
VBP1-204ENST00000625964 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.95□□□□□ -1.62
VBP1-204ENST00000625964 RAPGEF3O95398 923 aa4.95□□□□□ -1.62
VBP1-204ENST00000625964 PYGMP11217 842 aa4.95□□□□□ -1.62
VBP1-204ENST00000625964 RRADP55042 308 aa4.95□□□□□ -1.62
VBP1-204ENST00000625964 GRM7Q14831 915 aa4.95□□□□□ -1.62
VBP1-204ENST00000625964 NOLC1Q14978 699 aaKnown RBP eCLIP4.95□□□□□ -1.623e-14■■■□□ 14.8
VBP1-204ENST00000625964 TRIM61Q5EBN2 209 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms