RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 CYB5RLQ6IPT4 315 aa12.4□□□□□ -0.43
CLTC-215ENST00000621829 LUZP2Q86TE4 346 aa12.4□□□□□ -0.43
CLTC-215ENST00000621829 ATP6V0A4Q9HBG4 840 aa12.4□□□□□ -0.43
CLTC-215ENST00000621829 FBXL5Q9UKA1 691 aa12.4□□□□□ -0.43
CLTC-215ENST00000621829 EFCAB5A4FU69 1503 aa12.4□□□□□ -0.43
CLTC-215ENST00000621829 NSUN2Q08J23 767 aaKnown RBP eCLIP12.39□□□□□ -0.43
CLTC-215ENST00000621829 PUM3Q15397 648 aaKnown RBP12.39□□□□□ -0.43
CLTC-215ENST00000621829 METTL13Q8N6R0 699 aa12.39□□□□□ -0.43
CLTC-215ENST00000621829 DEPTORQ8TB45 409 aa12.39□□□□□ -0.43
CLTC-215ENST00000621829 TMEM191CA6NGB0 347 aa12.39□□□□□ -0.43
CLTC-215ENST00000621829 ZNF185O15231 689 aa12.39□□□□□ -0.43
CLTC-215ENST00000621829 AP1G2O75843 785 aa12.39□□□□□ -0.43
CLTC-215ENST00000621829 TMEM191BP0C7N4 346 aa12.39□□□□□ -0.43
CLTC-215ENST00000621829 FOSL2P15408 326 aa12.39□□□□□ -0.43
CLTC-215ENST00000621829 ZCWPW2Q504Y3 356 aa12.39□□□□□ -0.43
CLTC-215ENST00000621829 CYB5D1Q6P9G0 228 aa12.39□□□□□ -0.43
CLTC-215ENST00000621829 MB21D1Q8N884 522 aa12.39□□□□□ -0.43
CLTC-215ENST00000621829 NLRP3Q96P20 1036 aa12.39□□□□□ -0.43
CLTC-215ENST00000621829 KRT37O76014 449 aa12.39□□□□□ -0.43
CLTC-215ENST00000621829 ARHGEF25Q86VW2 580 aa12.39□□□□□ -0.43
CLTC-215ENST00000621829 GLT8D2Q9H1C3 349 aa12.39□□□□□ -0.43
CLTC-215ENST00000621829 ZWILCHQ9H900 591 aa12.39□□□□□ -0.43
CLTC-215ENST00000621829 LVRNQ6Q4G3 990 aa12.39□□□□□ -0.43
CLTC-215ENST00000621829 ZNF507Q8TCN5 953 aa12.39□□□□□ -0.43
CLTC-215ENST00000621829 KIAA1024Q9UPX6 916 aa12.39□□□□□ -0.43
CLTC-215ENST00000621829 PDIA3P30101 505 aaKnown RBP12.39□□□□□ -0.43
CLTC-215ENST00000621829 SLC39A14Q15043 492 aa12.39□□□□□ -0.43
CLTC-215ENST00000621829 ANKRD7Q92527 254 aa12.39□□□□□ -0.43
CLTC-215ENST00000621829 TMA16Q96EY4 203 aaKnown RBP12.39□□□□□ -0.43
CLTC-215ENST00000621829 DSG1Q02413 1049 aa12.39□□□□□ -0.43
CLTC-215ENST00000621829 LZTS2Q9BRK4 669 aa12.39□□□□□ -0.43
CLTC-215ENST00000621829 CACNB1Q02641 598 aaPredicted RBP12.39□□□□□ -0.43
CLTC-215ENST00000621829 PLOD1Q02809 727 aaPredicted RBP12.39□□□□□ -0.43
CLTC-215ENST00000621829 DMP1Q13316 513 aaPredicted RBP12.39□□□□□ -0.43
CLTC-215ENST00000621829 GRAMD1AQ96CP6 724 aa12.39□□□□□ -0.43
CLTC-215ENST00000621829 VPS11Q9H270 941 aa12.39□□□□□ -0.43
CLTC-215ENST00000621829 COL4A3BPQ9Y5P4 624 aa12.39□□□□□ -0.43
CLTC-215ENST00000621829 SLC1A4P43007 532 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 MAP3K10Q02779 954 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 PPP2R5BQ15173 497 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 ANGPT1Q15389 498 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 FAM81BQ96LP2 452 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 USP15Q9Y4E8 981 aaPredicted RBP12.38□□□□□ -0.43
CLTC-215ENST00000621829 GOLGA8RI6L899 631 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 TBC1D4O60343 1298 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 CCDC22O60826 627 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 ZAP70P43403 619 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 ZBTB18Q99592 522 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 ADAMTS1Q9UHI8 967 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 SYNJ2O15056 1496 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 IQCA1LA6NCM1 817 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 CCDC188H7C350 402 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 NSMFQ6X4W1 530 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 NFATC2IPQ8NCF5 419 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 BBS2Q9BXC9 721 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 ATAD2BQ9ULI0 1458 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 ATP1A1P05023 1023 aaKnown RBP12.38□□□□□ -0.43
CLTC-215ENST00000621829 SOX5P35711 763 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 ATP1A4Q13733 1029 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 CLEC4FQ8N1N0 589 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 RPS6KC1Q96S38 1066 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 HEMGNQ9BXL5 484 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 MAPKBP1O60336 1514 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 SETD1BQ9UPS6 1966 aaKnown RBP12.38□□□□□ -0.43
CLTC-215ENST00000621829 F5H423 210 aaPredicted RBP12.38□□□□□ -0.43
CLTC-215ENST00000621829 TAC1P20366 129 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 SOX11P35716 441 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 TRIP10Q15642 601 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 ZC3H15Q8WU90 426 aaKnown RBP12.38□□□□□ -0.43
CLTC-215ENST00000621829 WDR24Q96S15 920 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 DENND2AQ9ULE3 1009 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 MAGEA13PA6NCF6 341 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 PSMC2P35998 433 aaKnown RBP12.38□□□□□ -0.43
CLTC-215ENST00000621829 TAF1BQ53T94 588 aaPredicted RBP12.38□□□□□ -0.43
CLTC-215ENST00000621829 AGGF1Q8N302 714 aaeCLIP12.38□□□□□ -0.437e-7■□□□□ 8
CLTC-215ENST00000621829 MS4A14Q96JA4 679 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 MRGBPQ9NV56 204 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 DCAF8L1A6NGE4 600 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 DNALI1O14645 258 aaPredicted RBP12.38□□□□□ -0.43
CLTC-215ENST00000621829 PDHBP11177 359 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 TCN1P20061 433 aaPredicted RBP12.38□□□□□ -0.43
CLTC-215ENST00000621829 PLIN5Q00G26 463 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 NR1H3Q13133 447 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 EIF4A2Q14240 407 aaKnown RBP12.38□□□□□ -0.43
CLTC-215ENST00000621829 MTERF3Q96E29 417 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 TRIM11Q96F44 468 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 MID2Q9UJV3 735 aa12.38□□□□□ -0.43
CLTC-215ENST00000621829 MRPS26Q9BYN8 205 aaKnown RBP12.37□□□□□ -0.43
CLTC-215ENST00000621829 POLR3EQ9NVU0 708 aa12.37□□□□□ -0.43
CLTC-215ENST00000621829 SYBUQ9NX95 663 aa12.37□□□□□ -0.43
CLTC-215ENST00000621829 ITGA6P23229 1130 aa12.37□□□□□ -0.43
CLTC-215ENST00000621829 PMLP29590 882 aa12.37□□□□□ -0.43
CLTC-215ENST00000621829 VHLP40337 213 aa12.37□□□□□ -0.43
CLTC-215ENST00000621829 HADHAP40939 763 aa12.37□□□□□ -0.43
CLTC-215ENST00000621829 CLK1P49759 484 aaKnown RBP12.37□□□□□ -0.43
CLTC-215ENST00000621829 THEMISQ8N1K5 641 aaPredicted RBP12.37□□□□□ -0.43
CLTC-215ENST00000621829 MARCH10Q8NA82 808 aaPredicted RBP12.37□□□□□ -0.43
CLTC-215ENST00000621829 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.37□□□□□ -0.433e-10■■■■■ 88.3
CLTC-215ENST00000621829 PBXIP1Q96AQ6 731 aa12.37□□□□□ -0.43
CLTC-215ENST00000621829 DBR1Q9UK59 544 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms