RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 H0YC42 278 aa10.6□□□□□ -0.71
COL4A6-210ENST00000621266 NDUFA10O95299 355 aa10.6□□□□□ -0.71
COL4A6-210ENST00000621266 LIG4P49917 911 aa10.6□□□□□ -0.71
COL4A6-210ENST00000621266 THOC5Q13769 683 aaKnown RBP10.6□□□□□ -0.71
COL4A6-210ENST00000621266 PDXDC1Q6P996 788 aa10.6□□□□□ -0.71
COL4A6-210ENST00000621266 CCNYQ8ND76 341 aa10.6□□□□□ -0.71
COL4A6-210ENST00000621266 GJA10Q969M2 543 aa10.6□□□□□ -0.71
COL4A6-210ENST00000621266 TM6SF1Q9BZW5 370 aa10.6□□□□□ -0.71
COL4A6-210ENST00000621266 PABPC4Q13310 644 aaKnown RBP eCLIP10.6□□□□□ -0.71
COL4A6-210ENST00000621266 CEP78Q5JTW2 689 aa10.6□□□□□ -0.71
COL4A6-210ENST00000621266 SMIM5Q71RC9 77 aa10.6□□□□□ -0.71
COL4A6-210ENST00000621266 COQ7Q99807 217 aa10.6□□□□□ -0.71
COL4A6-210ENST00000621266 MAN1B1Q9UKM7 699 aa10.6□□□□□ -0.71
COL4A6-210ENST00000621266 MDH1BQ5I0G3 518 aa10.6□□□□□ -0.71
COL4A6-210ENST00000621266 SPON1Q9HCB6 807 aa10.6□□□□□ -0.71
COL4A6-210ENST00000621266 FNDC3AQ9Y2H6 1198 aaKnown RBP10.6□□□□□ -0.71
COL4A6-210ENST00000621266 PCDHB4Q9Y5E5 795 aa10.6□□□□□ -0.71
COL4A6-210ENST00000621266 USP6P35125 1406 aa10.6□□□□□ -0.71
COL4A6-210ENST00000621266 ROBO2Q9HCK4 1378 aa10.6□□□□□ -0.71
COL4A6-210ENST00000621266 GFPT2O94808 682 aa10.6□□□□□ -0.71
COL4A6-210ENST00000621266 TFAP4Q01664 338 aa10.6□□□□□ -0.71
COL4A6-210ENST00000621266 MCF2L2Q86YR7 1114 aa10.6□□□□□ -0.71
COL4A6-210ENST00000621266 VSTM4Q8IW00 320 aa10.6□□□□□ -0.71
COL4A6-210ENST00000621266 DEPTORQ8TB45 409 aa10.6□□□□□ -0.71
COL4A6-210ENST00000621266 SAYSD1Q9NPB0 183 aa10.6□□□□□ -0.71
COL4A6-210ENST00000621266 COPG1Q9Y678 874 aaKnown RBP10.6□□□□□ -0.71
COL4A6-210ENST00000621266 GUCY1A3Q02108 690 aa10.6□□□□□ -0.71
COL4A6-210ENST00000621266 WDR75Q8IWA0 830 aaKnown RBP10.6□□□□□ -0.71
COL4A6-210ENST00000621266 SRRM1Q8IYB3 904 aaKnown RBP10.6□□□□□ -0.71
COL4A6-210ENST00000621266 LRRC47Q8N1G4 583 aaKnown RBP10.6□□□□□ -0.71
COL4A6-210ENST00000621266 PLEKHF1Q96S99 279 aa10.6□□□□□ -0.71
COL4A6-210ENST00000621266 ADNPQ9H2P0 1102 aa10.6□□□□□ -0.71
COL4A6-210ENST00000621266 RNPEPQ9H4A4 650 aa10.6□□□□□ -0.71
COL4A6-210ENST00000621266 CFAP69A5D8W1 941 aa10.59□□□□□ -0.71
COL4A6-210ENST00000621266 STK25O00506 426 aa10.59□□□□□ -0.71
COL4A6-210ENST00000621266 COPEO14579 308 aa10.59□□□□□ -0.71
COL4A6-210ENST00000621266 MLH1P40692 756 aa10.59□□□□□ -0.71
COL4A6-210ENST00000621266 PPARAQ07869 468 aa10.59□□□□□ -0.71
COL4A6-210ENST00000621266 FSCBQ5H9T9 825 aa10.59□□□□□ -0.71
COL4A6-210ENST00000621266 ARMCX5Q6P1M9 558 aa10.59□□□□□ -0.71
COL4A6-210ENST00000621266 DISC1Q9NRI5 854 aa10.59□□□□□ -0.71
COL4A6-210ENST00000621266 ZBTB1Q9Y2K1 713 aa10.59□□□□□ -0.71
COL4A6-210ENST00000621266 CLTCQ00610 1675 aaKnown RBP10.59□□□□□ -0.71
COL4A6-210ENST00000621266 GOLGA8CPA6NN73 597 aa10.59□□□□□ -0.71
COL4A6-210ENST00000621266 UBTFL6P0CB48 400 aaPredicted RBP10.59□□□□□ -0.71
COL4A6-210ENST00000621266 BTKQ06187 659 aa10.59□□□□□ -0.71
COL4A6-210ENST00000621266 DMPKQ09013 629 aa10.59□□□□□ -0.71
COL4A6-210ENST00000621266 CERKLQ49MI3 558 aaPredicted RBP10.59□□□□□ -0.71
COL4A6-210ENST00000621266 EAF2Q96CJ1 260 aaPredicted RBP10.59□□□□□ -0.71
COL4A6-210ENST00000621266 CNGB3Q9NQW8 809 aa10.59□□□□□ -0.71
COL4A6-210ENST00000621266 SERPINB10P48595 397 aa10.59□□□□□ -0.71
COL4A6-210ENST00000621266 GLG1Q92896 1179 aa10.59□□□□□ -0.71
COL4A6-210ENST00000621266 SNX25Q9H3E2 840 aa10.59□□□□□ -0.71
COL4A6-210ENST00000621266 RNF14Q9UBS8 474 aa10.59□□□□□ -0.71
COL4A6-210ENST00000621266 TRIM16O95361 564 aa10.59□□□□□ -0.71
COL4A6-210ENST00000621266 SRGAP2BP0DMP2 458 aa10.59□□□□□ -0.71
COL4A6-210ENST00000621266 AOC3Q16853 763 aa10.59□□□□□ -0.71
COL4A6-210ENST00000621266 BLIDQ8IZY5 108 aa10.59□□□□□ -0.71
COL4A6-210ENST00000621266 ZFYVE19Q96K21 471 aa10.59□□□□□ -0.71
COL4A6-210ENST00000621266 CARD9Q9H257 536 aa10.59□□□□□ -0.71
COL4A6-210ENST00000621266 PJA2O43164 708 aa10.59□□□□□ -0.71
COL4A6-210ENST00000621266 GAS7O60861 476 aa10.59□□□□□ -0.71
COL4A6-210ENST00000621266 SERPINB4P48594 390 aa10.59□□□□□ -0.71
COL4A6-210ENST00000621266 KLC1Q07866 573 aa10.59□□□□□ -0.71
COL4A6-210ENST00000621266 LRRC41Q15345 812 aa10.59□□□□□ -0.71
COL4A6-210ENST00000621266 RARS2Q5T160 578 aaKnown RBP10.59□□□□□ -0.71
COL4A6-210ENST00000621266 SNX24Q9Y343 169 aa10.59□□□□□ -0.71
COL4A6-210ENST00000621266 BTBD18B2RXH4 712 aa10.58□□□□□ -0.71
COL4A6-210ENST00000621266 TNNC2P02585 160 aa10.58□□□□□ -0.71
COL4A6-210ENST00000621266 PYGLP06737 847 aa10.58□□□□□ -0.71
COL4A6-210ENST00000621266 SCP2P22307 547 aa10.58□□□□□ -0.71
COL4A6-210ENST00000621266 MFAP3P55082 362 aa10.58□□□□□ -0.71
COL4A6-210ENST00000621266 CENPUQ71F23 418 aa10.58□□□□□ -0.71
COL4A6-210ENST00000621266 ARMCX6Q7L4S7 300 aa10.58□□□□□ -0.71
COL4A6-210ENST00000621266 SPICE1Q8N0Z3 855 aa10.58□□□□□ -0.71
COL4A6-210ENST00000621266 TEX9Q8N6V9 391 aa10.58□□□□□ -0.71
COL4A6-210ENST00000621266 KCTD6Q8NC69 237 aa10.58□□□□□ -0.71
COL4A6-210ENST00000621266 ASZ1Q8WWH4 475 aa10.58□□□□□ -0.71
COL4A6-210ENST00000621266 ARL8AQ96BM9 186 aa10.58□□□□□ -0.71
COL4A6-210ENST00000621266 CHMP2BQ9UQN3 213 aa10.58□□□□□ -0.71
COL4A6-210ENST00000621266 CLASP1Q7Z460 1538 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 PRR23D1E9PI22 279 aaPredicted RBP10.58□□□□□ -0.72
COL4A6-210ENST00000621266 IKBKBO14920 756 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 PRR23D2P0DMB1 279 aaPredicted RBP10.58□□□□□ -0.72
COL4A6-210ENST00000621266 HSPD1P10809 573 aaKnown RBP10.58□□□□□ -0.72
COL4A6-210ENST00000621266 ADD1P35611 737 aaKnown RBP10.58□□□□□ -0.72
COL4A6-210ENST00000621266 PTK2Q05397 1052 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 CYLC2Q14093 348 aaPredicted RBP10.58□□□□□ -0.72
COL4A6-210ENST00000621266 CNGA3Q16281 694 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 CIAPIN1Q6FI81 312 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 TLK2Q86UE8 772 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 FAM178BQ8IXR5 827 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 GPKOWQ92917 476 aaPredicted RBP eCLIP10.58□□□□□ -0.72
COL4A6-210ENST00000621266 EDC3Q96F86 508 aaKnown RBP10.58□□□□□ -0.72
COL4A6-210ENST00000621266 STMN3Q9NZ72 180 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 WDR17Q8IZU2 1322 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 SYNDIG1LA6NDD5 238 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 GOLGA8SH3BPF8 625 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 CTIFO43310 598 aaKnown RBP10.58□□□□□ -0.72
COL4A6-210ENST00000621266 POLR2BP30876 1174 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms