RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 FAM228BP0C875 321 aa11.66□□□□□ -0.54
CDH1-214ENST00000621016 SLC9A1P19634 815 aa11.66□□□□□ -0.54
CDH1-214ENST00000621016 NR2F2P24468 414 aa11.66□□□□□ -0.54
CDH1-214ENST00000621016 KLRC1P26715 233 aa11.66□□□□□ -0.54
CDH1-214ENST00000621016 PAPOLAP51003 745 aaKnown RBP11.66□□□□□ -0.54
CDH1-214ENST00000621016 KCNA1Q09470 495 aa11.66□□□□□ -0.54
CDH1-214ENST00000621016 KCNMA1Q12791 1236 aa11.66□□□□□ -0.54
CDH1-214ENST00000621016 NAA35Q5VZE5 725 aa11.66□□□□□ -0.54
CDH1-214ENST00000621016 RETREG2Q8NC44 543 aa11.66□□□□□ -0.54
CDH1-214ENST00000621016 TCP11Q8WWU5 503 aa11.66□□□□□ -0.54
CDH1-214ENST00000621016 ANKS1AQ92625 1134 aa11.66□□□□□ -0.54
CDH1-214ENST00000621016 ERGIC2Q96RQ1 377 aa11.66□□□□□ -0.54
CDH1-214ENST00000621016 TSC22D3Q99576 134 aa11.66□□□□□ -0.54
CDH1-214ENST00000621016 SH2D3AQ9BRG2 576 aa11.66□□□□□ -0.54
CDH1-214ENST00000621016 AP1M1Q9BXS5 423 aa11.66□□□□□ -0.54
CDH1-214ENST00000621016 TRIM31Q9BZY9 425 aa11.66□□□□□ -0.54
CDH1-214ENST00000621016 EMILIN3Q9NT22 766 aa11.66□□□□□ -0.54
CDH1-214ENST00000621016 ANKRD36CQ5JPF3 1778 aa11.66□□□□□ -0.54
CDH1-214ENST00000621016 RSPH10B2B2RC85 870 aa11.66□□□□□ -0.54
CDH1-214ENST00000621016 ZBTB39O15060 712 aa11.66□□□□□ -0.54
CDH1-214ENST00000621016 RSPH10BP0C881 870 aa11.66□□□□□ -0.54
CDH1-214ENST00000621016 GUCY1A3Q02108 690 aa11.66□□□□□ -0.54
CDH1-214ENST00000621016 PRPF4BQ13523 1007 aaKnown RBP11.66□□□□□ -0.54
CDH1-214ENST00000621016 FAM163AQ96GL9 167 aaPredicted RBP11.66□□□□□ -0.54
CDH1-214ENST00000621016 PLEKHG4BQ96PX9 1271 aa11.66□□□□□ -0.54
CDH1-214ENST00000621016 RGL1Q9NZL6 768 aa11.66□□□□□ -0.54
CDH1-214ENST00000621016 DDX60Q8IY21 1712 aaKnown RBP11.66□□□□□ -0.54
CDH1-214ENST00000621016 PNMA6FA0A0J9YX94 578 aa11.66□□□□□ -0.54
CDH1-214ENST00000621016 KCNK3O14649 394 aa11.66□□□□□ -0.54
CDH1-214ENST00000621016 TRIM37O94972 964 aa11.66□□□□□ -0.54
CDH1-214ENST00000621016 FGFR1OPO95684 399 aaKnown RBP11.66□□□□□ -0.54
CDH1-214ENST00000621016 CLTAP09496 248 aa11.66□□□□□ -0.54
CDH1-214ENST00000621016 ATP2B4P23634 1241 aa11.66□□□□□ -0.54
CDH1-214ENST00000621016 CARSP49589 748 aaKnown RBP11.66□□□□□ -0.54
CDH1-214ENST00000621016 ZNF543Q08ER8 600 aa11.66□□□□□ -0.54
CDH1-214ENST00000621016 QRICH1Q2TAL8 776 aa11.66□□□□□ -0.54
CDH1-214ENST00000621016 HOOK3Q86VS8 718 aa11.66□□□□□ -0.54
CDH1-214ENST00000621016 GUF1Q8N442 669 aaKnown RBP11.66□□□□□ -0.54
CDH1-214ENST00000621016 EIF3HO15372 352 aaKnown RBP eCLIP11.65□□□□□ -0.54
CDH1-214ENST00000621016 ZSCAN9O15535 394 aaPredicted RBP11.65□□□□□ -0.54
CDH1-214ENST00000621016 EEF2P13639 858 aaKnown RBP11.65□□□□□ -0.54
CDH1-214ENST00000621016 SEPT2Q15019 361 aa11.65□□□□□ -0.54
CDH1-214ENST00000621016 IQCEQ6IPM2 695 aa11.65□□□□□ -0.54
CDH1-214ENST00000621016 SLF2Q8IX21 1173 aa11.65□□□□□ -0.54
CDH1-214ENST00000621016 PHC3Q8NDX5 983 aa11.65□□□□□ -0.54
CDH1-214ENST00000621016 RIOX1Q9H6W3 641 aa11.65□□□□□ -0.54
CDH1-214ENST00000621016 TRPC6Q9Y210 931 aa11.65□□□□□ -0.54
CDH1-214ENST00000621016 LRP5O75197 1615 aa11.65□□□□□ -0.54
CDH1-214ENST00000621016 TLR2O60603 784 aa11.65□□□□□ -0.54
CDH1-214ENST00000621016 MED24O75448 989 aa11.65□□□□□ -0.54
CDH1-214ENST00000621016 GLI1P08151 1106 aa11.65□□□□□ -0.54
CDH1-214ENST00000621016 FAM153BP0C7A2 387 aa11.65□□□□□ -0.54
CDH1-214ENST00000621016 NEFHP12036 1026 aa11.65□□□□□ -0.54
CDH1-214ENST00000621016 HPDP32754 393 aaPredicted RBP11.65□□□□□ -0.54
CDH1-214ENST00000621016 IGBP1P78318 339 aa11.65□□□□□ -0.54
CDH1-214ENST00000621016 ICA1Q05084 483 aa11.65□□□□□ -0.54
CDH1-214ENST00000621016 FAM153CQ494X1 144 aa11.65□□□□□ -0.54
CDH1-214ENST00000621016 WDR93Q6P2C0 686 aa11.65□□□□□ -0.54
CDH1-214ENST00000621016 TLDC1Q6P9B6 456 aa11.65□□□□□ -0.54
CDH1-214ENST00000621016 LRRC55Q6ZSA7 311 aa11.65□□□□□ -0.54
CDH1-214ENST00000621016 CCDC65Q8IXS2 484 aa11.65□□□□□ -0.54
CDH1-214ENST00000621016 TSEN2Q8NCE0 465 aaKnown RBP11.65□□□□□ -0.54
CDH1-214ENST00000621016 ARL8AQ96BM9 186 aa11.65□□□□□ -0.54
CDH1-214ENST00000621016 PPANQ9NQ55 473 aaKnown RBP11.65□□□□□ -0.54
CDH1-214ENST00000621016 RHBDL2Q9NX52 303 aa11.65□□□□□ -0.54
CDH1-214ENST00000621016 FAM153AQ9UHL3 310 aa11.65□□□□□ -0.54
CDH1-214ENST00000621016 BCORQ6W2J9 1755 aa11.65□□□□□ -0.54
CDH1-214ENST00000621016 DDX39AO00148 427 aaKnown RBP11.65□□□□□ -0.55
CDH1-214ENST00000621016 MAP3K13O43283 966 aa11.65□□□□□ -0.55
CDH1-214ENST00000621016 GYS1P13807 737 aa11.65□□□□□ -0.55
CDH1-214ENST00000621016 ABCB4P21439 1286 aa11.65□□□□□ -0.55
CDH1-214ENST00000621016 KCNH2Q12809 1159 aa11.65□□□□□ -0.55
CDH1-214ENST00000621016 HIBCHQ6NVY1 386 aaPredicted RBP11.65□□□□□ -0.55
CDH1-214ENST00000621016 MIS18BP1Q6P0N0 1132 aa11.65□□□□□ -0.55
CDH1-214ENST00000621016 MAATS1Q7Z4T9 603 aa11.65□□□□□ -0.55
CDH1-214ENST00000621016 ARHGAP22Q7Z5H3 698 aa11.65□□□□□ -0.55
CDH1-214ENST00000621016 TMEM110Q86TL2 294 aa11.65□□□□□ -0.55
CDH1-214ENST00000621016 DDX42Q86XP3 938 aaKnown RBP eCLIP11.65□□□□□ -0.55
CDH1-214ENST00000621016 KCNV2Q8TDN2 545 aa11.65□□□□□ -0.55
CDH1-214ENST00000621016 TLR10Q9BXR5 811 aa11.65□□□□□ -0.55
CDH1-214ENST00000621016 BHMT2Q9H2M3 363 aa11.65□□□□□ -0.55
CDH1-214ENST00000621016 STK17AQ9UEE5 414 aa11.65□□□□□ -0.55
CDH1-214ENST00000621016 CHORDC1Q9UHD1 332 aaPredicted RBP11.65□□□□□ -0.55
CDH1-214ENST00000621016 PCDHGC5Q9Y5F6 944 aa11.65□□□□□ -0.55
CDH1-214ENST00000621016 DOCK2Q92608 1830 aa11.64□□□□□ -0.55
CDH1-214ENST00000621016 CEP104O60308 925 aa11.64□□□□□ -0.55
CDH1-214ENST00000621016 DIAPH2O60879 1101 aa11.64□□□□□ -0.55
CDH1-214ENST00000621016 HEXIM1O94992 359 aaKnown RBP11.64□□□□□ -0.55
CDH1-214ENST00000621016 GCNT3O95395 438 aa11.64□□□□□ -0.55
CDH1-214ENST00000621016 HLA-DOAP06340 250 aa11.64□□□□□ -0.55
CDH1-214ENST00000621016 SMTNP53814 917 aa11.64□□□□□ -0.55
CDH1-214ENST00000621016 MPP3Q13368 585 aa11.64□□□□□ -0.55
CDH1-214ENST00000621016 MKRN4PQ13434 485 aaPredicted RBP11.64□□□□□ -0.55
CDH1-214ENST00000621016 ASPRV1Q53RT3 343 aa11.64□□□□□ -0.55
CDH1-214ENST00000621016 CDC42EP5Q6NZY7 148 aa11.64□□□□□ -0.55
CDH1-214ENST00000621016 PDXDC1Q6P996 788 aa11.64□□□□□ -0.55
CDH1-214ENST00000621016 FUKQ8N0W3 1084 aa11.64□□□□□ -0.55
CDH1-214ENST00000621016 BAP1Q92560 729 aa11.64□□□□□ -0.55
CDH1-214ENST00000621016 ZBTB5O15062 677 aa11.64□□□□□ -0.55
CDH1-214ENST00000621016 CFBP00751 764 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms