RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 GAP43P17677 238 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 KPNB1Q14974 876 aaKnown RBP7.67□□□□□ -1.18
COLCA1-205ENST00000620864 NUGGCQ68CJ6 796 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 ZBTB8OSQ8IWT0 167 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 LSG1Q9H089 658 aaKnown RBP7.67□□□□□ -1.18
COLCA1-205ENST00000620864 ZBTB40Q9NUA8 1239 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 POLKQ9UBT6 870 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 MIF4GDA9UHW6 222 aaKnown RBP7.67□□□□□ -1.18
COLCA1-205ENST00000620864 ZMYND10O75800 440 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 CA4P22748 312 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 PAPOLAP51003 745 aaKnown RBP7.67□□□□□ -1.18
COLCA1-205ENST00000620864 CNGA3Q16281 694 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 CCDC144BQ3MJ40 725 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 CASP10Q92851 521 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 MEIS3Q99687 375 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 TMEM245Q9H330 911 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 ADAM21Q9UKJ8 722 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 ARHGAP31Q2M1Z3 1444 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 KRT87PA6NCN2 255 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 SPDYE2BA6NHP3 402 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 PEX14O75381 377 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 SPDYE6P0CI01 402 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 ELF1P32519 619 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 KCNJ6P48051 423 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 ABCE1P61221 599 aaKnown RBP7.67□□□□□ -1.18
COLCA1-205ENST00000620864 EHHADHQ08426 723 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 TRIM67Q6ZTA4 783 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 RHOT2Q8IXI1 618 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 CHMP6Q96FZ7 201 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 CNPY3Q9BT09 278 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 PARD6BQ9BYG5 372 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 ASCC2Q9H1I8 757 aaPredicted RBP7.67□□□□□ -1.18
COLCA1-205ENST00000620864 GOLPH3LQ9H4A5 285 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 ASAP1Q9ULH1 1129 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 TMA7Q9Y2S6 64 aaKnown RBP7.67□□□□□ -1.18
COLCA1-205ENST00000620864 ANO9A1A5B4 782 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 SEMA3EO15041 775 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 HSPA1AP0DMV8 641 aaKnown RBP7.66□□□□□ -1.18
COLCA1-205ENST00000620864 HSPA1BP0DMV9 641 aaKnown RBP7.66□□□□□ -1.18
COLCA1-205ENST00000620864 ABCB4P21439 1286 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 EXOC3L4Q17RC7 722 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 RTKN2Q8IZC4 609 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 TTC13Q8NBP0 860 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 DEPDC1BQ8WUY9 529 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 PGBD1Q96JS3 809 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 SRP68Q9UHB9 627 aaKnown RBP7.66□□□□□ -1.18
COLCA1-205ENST00000620864 IRS2Q9Y4H2 1338 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 PIK3C2GO75747 1445 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 RHOBTB1O94844 696 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 RPN1P04843 607 aaKnown RBP7.66□□□□□ -1.18
COLCA1-205ENST00000620864 ATP2B4P23634 1241 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 CASP14P31944 242 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 TXKP42681 527 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 NFX1Q12986 1120 aaKnown RBP7.66□□□□□ -1.18
COLCA1-205ENST00000620864 SPOPLQ6IQ16 392 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 CDR2LQ86X02 465 aaPredicted RBP7.66□□□□□ -1.18
COLCA1-205ENST00000620864 RFWD2Q8NHY2 731 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 TADA1Q96BN2 335 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 TCEANC2Q96MN5 208 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 MLXIPQ9HAP2 919 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 FANCEQ9HB96 536 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 NLRC4Q9NPP4 1024 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 TARSL2A2RTX5 802 aaKnown RBP7.66□□□□□ -1.18
COLCA1-205ENST00000620864 ZNF839A8K0R7 811 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 KCNQ2O43526 872 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 LZTS3O60299 673 aaPredicted RBP7.66□□□□□ -1.18
COLCA1-205ENST00000620864 IREB2P48200 963 aaKnown RBP7.66□□□□□ -1.18
COLCA1-205ENST00000620864 YARSP54577 528 aaKnown RBP7.66□□□□□ -1.18
COLCA1-205ENST00000620864 NUP107P57740 925 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 PPARDQ03181 441 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 SEMA3FQ13275 785 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 EFTUD2Q15029 972 aaKnown RBP eCLIP7.66□□□□□ -1.18
COLCA1-205ENST00000620864 MYSM1Q5VVJ2 828 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 KAZNQ674X7 775 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 SLC35F6Q8N357 371 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 C17orf53Q8N3J3 647 aaPredicted RBP7.66□□□□□ -1.18
COLCA1-205ENST00000620864 FAM135BQ49AJ0 1406 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 FAM95CA0A1B0GW59 222 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 COPEO14579 308 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 PRDM1O75626 825 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 PURAQ00577 322 aaKnown RBP7.66□□□□□ -1.18
COLCA1-205ENST00000620864 MYO1EQ12965 1108 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 KRT40Q6A162 431 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 LRRC8EQ6NSJ5 796 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 NLRX1Q86UT6 975 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 NCLNQ969V3 563 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 ITM2BQ9Y287 266 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 KDM5DQ9BY66 1539 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 SGSM2O43147 1006 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 STRNO43815 780 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 PDHA1P08559 390 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 PFKFB1P16118 471 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 IL31Q6EBC2 164 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 TNIP2Q8NFZ5 429 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 SLC12A6Q9UHW9 1150 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 MAGI2Q86UL8 1455 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.66□□□□□ -1.18
COLCA1-205ENST00000620864 PPP6R2O75170 966 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 RAD23BP54727 409 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 PPP2R2AP63151 447 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms