RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 FAM49AQ9H0Q0 323 aaPredicted RBP20.49■□□□□ 0.87
LITAF-220ENST00000620789 TMEM150BA6NC51 233 aa20.48■□□□□ 0.87
LITAF-220ENST00000620789 MAGEB2O15479 319 aa20.48■□□□□ 0.87
LITAF-220ENST00000620789 BECN1Q14457 450 aa20.48■□□□□ 0.87
LITAF-220ENST00000620789 MBTPS1Q14703 1052 aa20.48■□□□□ 0.87
LITAF-220ENST00000620789 MTERF2Q49AM1 385 aa20.48■□□□□ 0.87
LITAF-220ENST00000620789 HABP4Q5JVS0 413 aaKnown RBP20.48■□□□□ 0.87
LITAF-220ENST00000620789 ZNF365Q70YC5 407 aa20.48■□□□□ 0.87
LITAF-220ENST00000620789 TPH2Q8IWU9 490 aa20.48■□□□□ 0.87
LITAF-220ENST00000620789 ZSCAN16Q9H4T2 348 aaPredicted RBP20.48■□□□□ 0.87
LITAF-220ENST00000620789 NBNO60934 754 aa20.47■□□□□ 0.87
LITAF-220ENST00000620789 LYPLA2O95372 231 aa20.47■□□□□ 0.87
LITAF-220ENST00000620789 FGBP02675 491 aa20.47■□□□□ 0.87
LITAF-220ENST00000620789 CXCL10P02778 98 aa20.47■□□□□ 0.87
LITAF-220ENST00000620789 YWHABP31946 246 aaKnown RBP20.47■□□□□ 0.87
LITAF-220ENST00000620789 MGAT3Q09327 533 aa20.47■□□□□ 0.87
LITAF-220ENST00000620789 PDIA5Q14554 519 aa20.47■□□□□ 0.87
LITAF-220ENST00000620789 DTHD1Q6ZMT9 781 aa20.47■□□□□ 0.87
LITAF-220ENST00000620789 NME8Q8N427 588 aa20.47■□□□□ 0.87
LITAF-220ENST00000620789 IGSF22Q8N9C0 903 aa20.47■□□□□ 0.87
LITAF-220ENST00000620789 ERMNQ8TAM6 284 aa20.47■□□□□ 0.87
LITAF-220ENST00000620789 CEP89Q96ST8 783 aa20.47■□□□□ 0.87
LITAF-220ENST00000620789 RAB34Q9BZG1 259 aa20.47■□□□□ 0.87
LITAF-220ENST00000620789 LRWD1Q9UFC0 647 aa20.47■□□□□ 0.87
LITAF-220ENST00000620789 LAMA3Q16787 3333 aa20.47■□□□□ 0.87
LITAF-220ENST00000620789 BMP15O95972 392 aa20.46■□□□□ 0.87
LITAF-220ENST00000620789 CHRNA1P02708 482 aa20.46■□□□□ 0.87
LITAF-220ENST00000620789 MRPS6P82932 125 aaKnown RBP20.46■□□□□ 0.87
LITAF-220ENST00000620789 TBC1D8BQ0IIM8 1120 aa20.46■□□□□ 0.87
LITAF-220ENST00000620789 IL17AQ16552 155 aa20.46■□□□□ 0.87
LITAF-220ENST00000620789 IER5Q5VY09 327 aa20.46■□□□□ 0.87
LITAF-220ENST00000620789 ARL6IP4Q66PJ3 421 aaKnown RBP20.46■□□□□ 0.87
LITAF-220ENST00000620789 PLA2G4FQ68DD2 849 aa20.46■□□□□ 0.87
LITAF-220ENST00000620789 OTUD6AQ7L8S5 288 aa20.46■□□□□ 0.87
LITAF-220ENST00000620789 KIAA0319LQ8IZA0 1049 aa20.46■□□□□ 0.87
LITAF-220ENST00000620789 METTL13Q8N6R0 699 aa20.46■□□□□ 0.87
LITAF-220ENST00000620789 RNPC3Q96LT9 517 aaKnown RBP20.46■□□□□ 0.87
LITAF-220ENST00000620789 SH2D3AQ9BRG2 576 aa20.46■□□□□ 0.87
LITAF-220ENST00000620789 POLR3CQ9BUI4 534 aaPredicted RBP20.46■□□□□ 0.87
LITAF-220ENST00000620789 FTOQ9C0B1 505 aaKnown RBP eCLIP20.46■□□□□ 0.87
LITAF-220ENST00000620789 TUFT1Q9NNX1 390 aa20.46■□□□□ 0.87
LITAF-220ENST00000620789 CYP26B1Q9NR63 512 aa20.46■□□□□ 0.87
LITAF-220ENST00000620789 MED24O75448 989 aa20.45■□□□□ 0.86
LITAF-220ENST00000620789 SPATA31C1P0DKV0 1188 aa20.45■□□□□ 0.86
LITAF-220ENST00000620789 SF3A1Q15459 793 aaKnown RBP20.45■□□□□ 0.86
LITAF-220ENST00000620789 HAUS3Q68CZ6 603 aa20.45■□□□□ 0.86
LITAF-220ENST00000620789 EFCAB12Q6NXP0 572 aa20.45■□□□□ 0.86
LITAF-220ENST00000620789 FAM173BQ6P4H8 233 aa20.45■□□□□ 0.86
LITAF-220ENST00000620789 CATSPER3Q86XQ3 398 aa20.45■□□□□ 0.86
LITAF-220ENST00000620789 LINC01465Q8N7H1 131 aa20.45■□□□□ 0.86
LITAF-220ENST00000620789 HERVK_113Q902F9 699 aa20.45■□□□□ 0.86
LITAF-220ENST00000620789 CEP170P1Q96L14 293 aa20.45■□□□□ 0.86
LITAF-220ENST00000620789 PPME1Q9Y570 386 aa20.45■□□□□ 0.86
LITAF-220ENST00000620789 CDY2AQ9Y6F7 541 aa20.45■□□□□ 0.86
LITAF-220ENST00000620789 SIP14410 1827 aa20.45■□□□□ 0.86
LITAF-220ENST00000620789 M0QZ92 97 aa20.44■□□□□ 0.86
LITAF-220ENST00000620789 ZBTB39O15060 712 aa20.44■□□□□ 0.86
LITAF-220ENST00000620789 MAFO75444 373 aaPredicted RBP20.44■□□□□ 0.86
LITAF-220ENST00000620789 ZSCAN22P10073 491 aaPredicted RBP20.44■□□□□ 0.86
LITAF-220ENST00000620789 ACTN1P12814 892 aa20.44■□□□□ 0.86
LITAF-220ENST00000620789 RPA1P27694 616 aa20.44■□□□□ 0.86
LITAF-220ENST00000620789 TMOD1P28289 359 aa20.44■□□□□ 0.86
LITAF-220ENST00000620789 CLCN3P51790 818 aa20.44■□□□□ 0.86
LITAF-220ENST00000620789 NPEPPSP55786 919 aa20.44■□□□□ 0.86
LITAF-220ENST00000620789 TMEM62Q0P6H9 643 aa20.44■□□□□ 0.86
LITAF-220ENST00000620789 LRIT3Q3SXY7 679 aa20.44■□□□□ 0.86
LITAF-220ENST00000620789 RASIP1Q5U651 963 aa20.44■□□□□ 0.86
LITAF-220ENST00000620789 OTOP2Q7RTS6 562 aa20.44■□□□□ 0.86
LITAF-220ENST00000620789 LRRC71Q8N4P6 559 aa20.44■□□□□ 0.86
LITAF-220ENST00000620789 MTIF3Q9H2K0 278 aaKnown RBP20.44■□□□□ 0.86
LITAF-220ENST00000620789 SUGCTQ9HAC7 445 aa20.44■□□□□ 0.86
LITAF-220ENST00000620789 TRPV2Q9Y5S1 764 aa20.44■□□□□ 0.86
LITAF-220ENST00000620789 STK24Q9Y6E0 443 aa20.44■□□□□ 0.86
LITAF-220ENST00000620789 EVPLQ92817 2033 aa20.44■□□□□ 0.86
LITAF-220ENST00000620789 TET1Q8NFU7 2136 aa20.44■□□□□ 0.86
LITAF-220ENST00000620789 ARID2Q68CP9 1835 aa20.43■□□□□ 0.86
LITAF-220ENST00000620789 IGKV6-21A0A0C4DH24 114 aa20.43■□□□□ 0.86
LITAF-220ENST00000620789 MUTP22033 750 aa20.43■□□□□ 0.86
LITAF-220ENST00000620789 XKR9Q5GH70 373 aa20.43■□□□□ 0.86
LITAF-220ENST00000620789 CNKSR3Q6P9H4 555 aa20.43■□□□□ 0.86
LITAF-220ENST00000620789 ZNF579Q8NAF0 562 aaKnown RBP20.43■□□□□ 0.86
LITAF-220ENST00000620789 MAP7D2Q96T17 732 aa20.43■□□□□ 0.86
LITAF-220ENST00000620789 JPH2Q9BR39 696 aaPredicted RBP20.43■□□□□ 0.86
LITAF-220ENST00000620789 CELF4Q9BZC1 486 aaKnown RBP20.43■□□□□ 0.86
LITAF-220ENST00000620789 OSBPL7Q9BZF2 842 aa20.43■□□□□ 0.86
LITAF-220ENST00000620789 ANKEF1Q9NU02 776 aa20.43■□□□□ 0.86
LITAF-220ENST00000620789 CLIC4Q9Y696 253 aa20.43■□□□□ 0.86
LITAF-220ENST00000620789 KDM3AQ9Y4C1 1321 aa20.43■□□□□ 0.86
LITAF-220ENST00000620789 LAMA2P24043 3122 aaKnown RBP20.42■□□□□ 0.86
LITAF-220ENST00000620789 VWA3AA6NCI4 1184 aa20.42■□□□□ 0.86
LITAF-220ENST00000620789 GHRP10912 638 aa20.42■□□□□ 0.86
LITAF-220ENST00000620789 XRCC6P12956 609 aaKnown RBP eCLIP20.42■□□□□ 0.86
LITAF-220ENST00000620789 CCT6AP40227 531 aaKnown RBP20.42■□□□□ 0.86
LITAF-220ENST00000620789 RFC5P40937 340 aa20.42■□□□□ 0.86
LITAF-220ENST00000620789 PKP1Q13835 747 aa20.42■□□□□ 0.86
LITAF-220ENST00000620789 PLEKHG4Q58EX7 1191 aa20.42■□□□□ 0.86
LITAF-220ENST00000620789 FBXO47Q5MNV8 452 aa20.42■□□□□ 0.86
LITAF-220ENST00000620789 POTEGQ6S5H5 508 aa20.42■□□□□ 0.86
LITAF-220ENST00000620789 EXOC8Q8IYI6 725 aa20.42■□□□□ 0.86
LITAF-220ENST00000620789 SNX29Q8TEQ0 813 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms